Version: Vancouver Short Read Analysis Package 4.0.16-dev.interval Version: Initializing class SeparateReads $Revision: 3125 $ Version: Initializing class Generic_AlignRead_Iterator $Revision: 3118 $ Version: Initializing class BedIterator $Revision: 2933 $ Version: Initializing class Log_Buffer $Revision: 2530 $ Info: 1000000 lines processed. Info: 2000000 lines processed. Info: 3000000 lines processed. Info: 4000000 lines processed. Info: 5000000 lines processed. Info: 6000000 lines processed. Info: Found 6084443 records. Version: Initializing class FileOut $Revision: 2530 $ Info: chr4.part.interval.gz 352116 Info: chr3.part.interval.gz 323807 Info: chr2.part.interval.gz 553040 Info: chrY.part.interval.gz 9693 Info: chr1.part.interval.gz 413754 Info: chrX.part.interval.gz 162282 Info: chrM.part.interval.gz 51 Info: chr19.part.interval.gz 171327 Info: chr18.part.interval.gz 178918 Info: chr17.part.interval.gz 241968 Info: chr16.part.interval.gz 216718 Info: chr15.part.interval.gz 245318 Info: chr14.part.interval.gz 245048 Info: chr13.part.interval.gz 268815 Info: chr12.part.interval.gz 250130 Info: chr11.part.interval.gz 369608 Info: chr9.part.interval.gz 470852 Info: chr10.part.interval.gz 313175 Info: chr8.part.interval.gz 284771 Info: chr7.part.interval.gz 330717 Info: chr6.part.interval.gz 335756 Info: chr5.part.interval.gz 346579