Version: Vancouver Short Read Analysis Package 4.0.16-dev.interval Version: Initializing class SeparateReads $Revision: 3125 $ Version: Initializing class Generic_AlignRead_Iterator $Revision: 3118 $ Version: Initializing class BedIterator $Revision: 2933 $ Version: Initializing class Log_Buffer $Revision: 2530 $ Info: 1000000 lines processed. Info: 2000000 lines processed. Info: 3000000 lines processed. Info: 4000000 lines processed. Info: 5000000 lines processed. Info: 6000000 lines processed. Info: Found 6812212 records. Version: Initializing class FileOut $Revision: 2530 $ Info: chr15.part.interval.gz 297265 Info: chr14.part.interval.gz 248403 Info: chr13.part.interval.gz 282186 Info: chr17_random.part.interval.gz 1067 Info: chr12.part.interval.gz 281936 Info: chr11.part.interval.gz 525234 Info: chrY_random.part.interval.gz 10322 Info: chr10.part.interval.gz 347101 Info: chr4_random.part.interval.gz 156 Info: chrUn_random.part.interval.gz 7478 Info: chrY.part.interval.gz 708 Info: chrX.part.interval.gz 110581 Info: chr16_random.part.interval.gz 3 Info: chrX_random.part.interval.gz 446 Info: chr3_random.part.interval.gz 43 Info: chrM.part.interval.gz 40 Info: chr1_random.part.interval.gz 2313 Info: chr9_random.part.interval.gz 1679 Info: chr13_random.part.interval.gz 630 Info: chr7_random.part.interval.gz 163 Info: chr9.part.interval.gz 380455 Info: chr8.part.interval.gz 365528 Info: chr8_random.part.interval.gz 1375 Info: chr7.part.interval.gz 430623 Info: chr6.part.interval.gz 344147 Info: chr5.part.interval.gz 463564 Info: chr4.part.interval.gz 495330 Info: chr3.part.interval.gz 292566 Info: chr2.part.interval.gz 527671 Info: chr1.part.interval.gz 436536 Info: chr5_random.part.interval.gz 120 Info: chr19.part.interval.gz 197436 Info: chr18.part.interval.gz 208567 Info: chr17.part.interval.gz 329288 Info: chr16.part.interval.gz 221252