ezh2_y641n_k4

Mapping stats: 93% aligned (88.4M aligned out of 95.4M total) 

Number of alignments in various mapping quality (MAPQ) intervals and number of unmapped sequences. The percentage and number of alignments in each category is given in brackets.

Mean Base Quality

Mean base quality of reads with low and high mapping quality.

Error Profile MAPQ >= 30

Mismatches Insertions Deletions

Error Profile MAPQ >= 20

Mismatches Insertions Deletions

Error Profile MAPQ >= 10

Mismatches Insertions Deletions

Error Profile MAPQ >= 3

Mismatches Insertions Deletions

Error Profile MAPQ < 3

Mismatches Insertions Deletions

Nucleotide Over-representation along read

Mer Q 1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
AAMAPQ >= 30 6.8 6.5 6.1 5.8 5.8 5.7 5.7 5.5 5.5 5.6 5.6 5.6 5.5 5.5 5.4 5.3 5.3 5.3 5.3 5.3 5.2 5.3 5.3 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1
AAMAPQ >= 20 6.3 5.9 5.5 5.2 5.2 5.1 5.1 5.0 4.9 5.1 5.1 5.1 5.0 4.8 4.8 4.7 4.7 4.7 4.7 4.6 4.6 4.6 4.7 4.7 4.7 4.7 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.7 4.7 4.6 4.7 4.6 4.6 4.6 4.7 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.7 4.7 4.6 4.7 4.8 4.8 4.8 4.7 4.8 4.8 4.8 4.8 4.9 4.9 4.9 4.9 4.9 5.0 4.9 4.9 4.9 4.9 5.0 5.0
AAMAPQ >= 10 7.1 6.8 6.3 5.9 6.0 6.0 6.1 5.8 5.9 6.1 6.0 5.9 5.7 5.5 5.5 5.5 5.5 5.4 5.4 5.3 5.3 5.4 5.5 5.5 5.6 5.4 5.5 5.4 5.5 5.5 5.4 5.4 5.5 5.5 5.5 5.6 5.8 5.7 5.7 5.5 5.8 5.6 5.4 5.5 5.6 5.8 5.8 5.8 5.9 5.9 5.9 6.0 5.9 5.9 6.0 6.1 6.3 6.0 6.0 6.2 6.3 6.3 6.5 6.5 6.5 6.4 6.4 6.5 6.4 6.6 6.6 6.7 6.7 6.7
AAMAPQ >= 3 6.9 6.8 6.1 5.9 5.9 5.5 5.8 5.7 5.8 6.0 6.0 6.0 5.5 5.7 5.3 5.5 5.8 5.5 5.3 5.1 5.2 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.5 5.8 5.5 5.6 5.6 5.5 5.6 5.6 6.1 5.5 5.7 5.6 5.7 5.6 5.3 5.4 5.3 5.8 6.1 6.3 6.2 6.2 6.1 6.3 6.3 6.3 6.5 6.6 6.7 6.5 6.1 6.4 6.6 6.9 7.0 6.8 6.9 6.7 6.8 6.7 6.7 6.9 7.0 7.1 7.0 6.9
AAMAPQ < 3 6.6 6.3 5.9 5.5 5.5 5.5 5.5 5.3 5.3 5.4 5.4 5.4 5.4 5.3 5.2 5.2 5.2 5.1 5.1 5.1 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.2 5.1 5.2 5.2 5.2 5.2 5.1 5.2 5.3 5.3 5.3 5.3 5.2 5.3 5.3 5.2 5.3 5.3 5.4 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3
AAUnmapped 8.6 7.9 7.3 7.0 7.1 7.0 11.9 6.9 6.9 7.0 7.0 7.1 7.2 6.9 6.9 6.8 6.8 6.8 6.7 6.8 6.8 6.9 6.9 11.7 6.9 6.8 6.8 6.8 6.7 6.8 6.8 6.9 6.9 6.8 6.9 6.9 6.8 6.8 6.7 6.8 6.8 6.8 6.7 6.7 6.7 6.7 6.8 6.7 6.7 6.7 6.7 6.7 6.6 6.6 6.7 6.7 6.7 6.7 6.6 6.7 6.7 6.6 6.6 6.7 6.7 6.8 11.3 11.5 11.4 11.4 11.3 11.0 10.3 9.8
ACMAPQ >= 30 4.7 4.7 4.7 4.8 4.9 4.6 4.8 4.6 4.6 4.6 4.7 4.6 4.7 4.6 4.6 4.6 4.7 4.6 4.7 4.7 4.7 4.6 4.7 4.6 4.6 4.7 4.6 4.6 4.7 4.7 4.7 4.7 4.6 4.7 4.6 4.7 4.7 4.7 4.7 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.7 4.7 4.6 4.7 4.6 4.6 4.7 4.6 4.7 4.7 4.6 4.6 4.7 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.6 4.7 4.6 4.6 4.6
ACMAPQ >= 20 4.7 4.6 4.5 4.6 4.8 4.5 4.6 4.4 4.5 4.4 4.5 4.4 4.6 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.3 4.4 4.3 4.3 4.4 4.3 4.3 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.3 4.4 4.3 4.3 4.3 4.4 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.2 4.3 4.2 4.2 4.3 4.3 4.2 4.3 4.4 4.4 4.2 4.3 4.2 4.2 4.2 4.2 4.1 4.3 4.2 4.2 4.3
ACMAPQ >= 10 4.7 4.5 4.5 4.8 5.0 4.8 5.0 4.6 4.7 4.8 4.9 4.7 4.8 4.7 5.0 4.9 4.9 4.8 4.7 4.7 4.9 4.7 4.7 4.7 4.7 4.8 4.8 4.7 4.8 4.9 4.8 5.0 4.9 4.8 4.6 4.8 4.7 4.7 4.9 4.8 4.8 4.8 4.7 4.5 4.5 4.6 4.7 4.6 4.9 5.0 4.7 4.9 4.8 4.8 4.9 4.9 4.9 5.0 5.0 5.1 5.3 5.2 5.1 5.1 5.0 5.0 4.9 5.0 5.0 4.8 4.9 4.9 4.9 5.1
ACMAPQ >= 3 4.7 4.5 4.4 4.8 4.6 4.8 4.8 4.6 4.9 4.9 5.1 5.1 5.2 5.1 5.4 4.7 5.0 5.0 4.8 4.9 5.1 5.1 4.8 5.1 4.9 5.0 4.9 4.9 5.1 5.0 5.2 5.3 5.1 4.8 4.8 4.9 4.7 5.1 4.9 4.7 5.0 4.8 4.9 4.6 4.7 4.8 4.7 4.6 4.8 4.8 4.7 4.8 4.5 4.6 4.5 4.9 4.9 5.0 5.2 5.3 5.5 5.2 5.4 5.2 5.1 5.0 5.0 5.0 5.0 4.7 5.0 5.3 5.0 5.4
ACMAPQ < 3 4.7 4.7 4.6 4.7 4.9 4.6 4.8 4.6 4.6 4.6 4.7 4.6 4.7 4.6 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.6 4.6 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.6 4.7 4.8 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.6 4.7 4.6 4.6 4.7 4.6 4.6 4.7
ACUnmapped 5.2 4.9 4.7 4.7 4.9 4.6 4.7 4.5 4.6 4.5 4.6 4.5 4.8 4.5 4.5 4.5 4.6 4.5 4.5 4.5 4.5 4.4 4.4 4.4 4.4 4.4 4.4 4.3 4.4 4.4 4.4 4.4 9.1 4.3 4.3 4.3 4.3 4.3 4.2 4.2 4.2 4.3 4.2 4.2 4.2 4.2 4.2 4.2 4.2 4.3 4.2 4.2 4.3 4.2 4.2 4.2 4.2 4.2 4.2 4.2 4.2 4.4 4.3 4.2 4.2 4.2 4.2 4.2 4.2 4.2 4.3 4.3 4.4 4.4
AGMAPQ >= 30 9.0 8.0 7.5 7.8 7.5 7.3 6.9 7.0 6.9 7.0 7.1 7.0 7.1 7.0 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.2 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1
AGMAPQ >= 20 9.1 7.8 7.3 7.5 7.3 7.0 6.8 6.8 6.8 6.9 6.9 6.7 6.9 6.8 6.9 6.9 6.9 6.9 6.9 6.9 6.9 6.8 7.0 6.9 7.0 7.0 6.9 7.0 7.0 7.1 6.9 6.9 6.9 6.8 6.8 6.9 6.8 6.8 6.8 6.8 6.8 6.8 6.7 6.8 6.8 6.8 6.8 6.8 6.9 7.0 6.8 6.7 6.7 6.6 6.7 6.6 6.6 6.5 6.5 6.4 6.4 6.4 6.4 6.3 6.4 6.3 6.3 6.3 6.4 6.3 6.5 6.4 6.3 6.3
AGMAPQ >= 10 9.3 7.9 7.5 7.8 7.6 7.3 7.0 7.2 7.1 7.4 7.3 7.1 7.2 7.2 7.2 7.2 7.2 7.4 7.3 7.3 7.3 7.2 7.6 7.4 7.6 7.5 7.3 7.5 7.4 7.5 7.4 7.4 7.5 7.2 7.2 7.2 7.3 7.1 7.2 7.2 7.1 7.2 7.0 7.1 7.1 7.3 7.3 7.2 7.3 7.5 7.2 7.1 7.2 7.4 7.3 7.2 7.1 7.3 7.1 7.2 7.2 7.2 7.0 7.2 7.1 7.2 7.2 7.3 7.3 7.2 7.3 7.5 7.3 7.1
AGMAPQ >= 3 9.1 8.0 7.2 7.5 7.7 7.4 7.4 7.6 7.5 7.7 7.6 7.5 7.5 7.4 7.9 7.1 7.8 7.9 7.5 7.4 7.8 7.6 8.0 7.8 7.7 7.5 7.5 7.6 7.5 7.6 7.7 7.7 7.7 7.5 7.2 7.2 7.5 7.4 7.1 7.1 7.3 6.9 7.3 7.2 7.2 7.1 7.7 7.4 7.6 7.8 7.5 7.3 7.6 7.6 7.7 7.8 7.4 7.7 7.3 7.2 7.5 7.6 7.3 7.6 7.4 7.7 7.5 7.6 7.7 7.4 7.8 7.6 7.5 7.1
AGMAPQ < 3 9.0 7.9 7.4 7.7 7.5 7.2 6.9 7.0 7.0 7.0 7.2 7.1 7.1 7.1 7.1 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.2 7.2 7.2 7.1 7.1 7.2 7.2 7.2 7.1 7.1 7.2 7.1 7.1 7.1 7.2 7.1 7.1 7.2 7.2 7.1 7.0 7.2 7.1 7.1 7.2 7.2 7.2 7.2 7.1 7.1 7.2 7.1 7.2 7.2 7.2 7.2 7.1 7.1 7.1 7.1 7.0 7.1 7.1 7.1 7.2 7.2 7.1 7.1 7.2 7.1 7.1 7.0
AGUnmapped 7.4 6.3 6.0 6.0 6.0 5.8 5.6 10.4 5.6 10.5 5.7 5.7 5.9 5.7 5.7 5.7 5.7 10.6 5.7 5.7 10.4 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.7 5.6 10.2 5.5 5.5 5.5 5.5 5.5 5.4 5.5 5.4 5.4 10.2 5.4 5.3 5.4 5.4 5.3 5.4 5.4 5.5 5.5 5.5 5.3 5.4 5.3 5.3 5.4 5.4 5.4 5.4 5.4 5.4 5.5 5.4 5.4 5.5 5.4 5.5 5.5 5.5 5.6 5.6 5.6 5.8 5.8
ATMAPQ >= 30 4.4 3.9 4.0 3.8 3.7 3.6 3.7 3.6 3.5 3.5 3.5 3.4 3.5 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.3 3.4 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.2 3.2 3.3 3.2 3.2 3.3
ATMAPQ >= 20 4.5 3.8 3.9 3.7 3.6 3.5 3.6 3.5 3.4 3.4 3.4 3.4 3.6 3.4 3.3 3.4 3.3 3.3 3.3 3.3 3.3 3.2 3.2 3.3 3.2 3.3 3.2 3.2 3.2 3.1 3.2 3.2 3.2 3.2 3.2 3.2 3.2 3.2 3.1 3.2 3.1 3.2 3.1 3.1 3.1 3.1 3.2 3.1 3.1 3.2 3.2 3.1 3.2 3.1 3.1 3.2 3.1 3.1 3.1 3.1 3.1 3.0 3.1 3.0 3.1 3.0 3.0 3.0 3.0 3.0 3.1 3.1 3.2 3.2
ATMAPQ >= 10 5.7 5.2 5.3 4.9 4.8 4.8 5.0 4.7 4.4 4.6 4.7 4.8 4.7 4.6 4.5 4.6 4.6 4.5 4.4 4.5 4.3 4.3 4.4 4.6 4.4 4.5 4.4 4.5 4.5 4.4 4.3 4.4 4.4 4.4 4.3 4.3 4.3 4.4 4.4 4.5 4.4 4.7 4.4 4.4 4.4 4.5 4.5 4.5 4.4 4.7 4.5 4.5 4.5 4.3 4.4 4.5 4.6 4.6 4.4 4.4 4.4 4.3 4.5 4.5 4.4 4.4 4.3 4.3 4.2 4.2 4.3 4.4 4.6 4.5
ATMAPQ >= 3 5.9 5.5 5.6 5.2 5.2 5.4 5.2 5.2 4.5 4.7 4.9 5.1 4.7 4.6 4.9 4.7 4.6 4.5 4.3 4.4 4.2 4.2 4.5 4.6 4.6 4.5 4.4 4.4 4.5 4.4 4.5 4.4 4.7 4.6 4.5 4.6 4.6 4.8 4.5 4.7 4.8 4.8 4.6 4.3 4.4 4.4 4.5 4.5 4.6 4.7 4.6 4.5 4.5 4.4 4.4 4.4 4.5 4.6 4.6 4.4 4.5 4.4 4.8 4.9 4.8 4.6 4.4 4.6 4.5 4.5 4.6 4.7 5.0 4.9
ATMAPQ < 3 4.8 4.3 4.4 4.1 4.0 4.0 4.1 3.9 3.8 3.8 3.9 3.9 3.9 3.8 3.8 3.8 3.8 3.7 3.7 3.7 3.7 3.7 3.7 3.8 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.8 3.7 3.7 3.7 3.7 3.7 3.6 3.6 3.7 3.7 3.6 3.7 3.6 3.7 3.7 3.7 3.7 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.6 3.7 3.6
ATUnmapped 7.0 11.0 6.2 5.7 5.6 5.7 5.6 5.5 5.3 5.4 5.5 5.3 5.5 5.4 5.2 5.3 5.2 5.2 5.2 5.0 5.1 5.2 5.1 5.1 9.9 5.2 5.1 5.1 5.0 5.0 5.1 5.1 5.1 5.0 5.0 5.0 5.1 9.7 5.0 5.0 5.0 5.0 9.7 5.0 5.0 5.0 5.0 4.9 5.0 9.7 5.0 5.0 5.0 4.9 4.9 5.0 5.0 5.0 4.9 4.9 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.0 5.0 5.1 5.1 5.2 5.3 5.2
CAMAPQ >= 30 7.2 5.5 6.2 6.3 5.9 6.2 5.8 6.2 6.3 6.2 6.1 6.2 6.1 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.1 6.2 6.2 6.2 6.2 6.2 6.1 6.2 6.2 6.1
CAMAPQ >= 20 7.0 5.5 6.1 6.3 5.8 6.2 5.8 6.2 6.3 6.2 6.1 6.2 6.0 6.1 6.2 6.1 6.1 6.1 6.1 6.2 6.0 6.1 6.1 6.1 6.0 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.0 5.9 6.0 6.0 6.0 6.0 6.0 6.0 6.0 5.9 6.0 5.9 6.0 6.0 5.9 6.0 6.1 5.9 5.9 5.9 5.9 6.0 5.9 5.8 5.8 5.8 5.8 5.8 5.8 5.8 5.8 5.8 5.7 5.7 5.8 5.8 5.8 5.9 5.7 5.7 5.8 5.7
CAMAPQ >= 10 7.9 5.9 6.7 6.9 6.6 6.8 6.3 7.0 7.1 7.1 6.9 7.0 7.0 7.1 7.0 7.1 7.1 7.0 7.2 7.3 7.0 7.0 7.0 7.3 6.9 7.0 7.1 7.3 7.3 7.3 7.2 7.4 7.1 7.0 7.2 7.3 7.2 7.3 7.0 7.2 7.0 7.0 7.0 6.9 7.2 7.2 7.1 7.1 7.4 7.0 7.2 7.0 7.3 7.3 7.1 7.3 7.1 7.2 7.2 7.3 7.1 7.3 7.2 7.2 7.1 7.1 7.3 7.3 7.1 7.0 7.2 7.2 7.2 7.0
CAMAPQ >= 3 8.1 6.0 7.0 7.2 7.0 7.4 6.9 7.4 7.3 7.6 7.5 7.3 7.2 7.4 7.1 7.1 7.0 6.8 6.8 7.1 7.0 7.3 7.1 7.3 7.0 6.8 7.3 7.3 7.4 7.6 7.6 7.5 7.3 7.1 7.3 7.6 7.7 7.2 7.0 7.4 6.7 7.3 7.0 6.7 7.2 7.2 7.0 7.0 7.1 6.9 7.0 6.8 6.8 6.9 6.9 7.0 6.9 6.8 7.1 7.4 7.4 7.2 7.1 7.2 7.1 7.2 7.0 7.3 7.2 7.1 7.2 7.2 7.3 7.1
CAMAPQ < 3 7.6 5.7 6.5 6.6 6.3 6.6 6.2 6.6 6.7 6.7 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.7 6.7 6.6 6.6 6.7 6.7 6.7 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.5 6.6 6.6 6.5 6.6 6.5 6.6 6.6 6.6 6.5 6.5 6.5 6.5 6.6 6.6 6.6 6.6 6.6 6.5 6.6 6.5 6.5 6.5 6.6 6.5 6.5 6.5 6.5
CAUnmapped 6.8 5.4 6.0 6.1 5.8 6.0 5.6 6.0 6.0 5.9 5.8 6.1 5.6 5.8 5.8 5.8 10.6 5.8 5.8 10.6 5.8 5.7 5.6 5.7 5.7 5.6 5.6 5.6 5.6 5.6 5.6 5.5 5.5 5.5 5.5 5.5 5.5 5.4 5.4 10.3 5.5 5.4 5.4 5.5 5.4 5.5 5.4 5.4 5.5 5.5 5.5 5.5 5.4 5.4 5.5 5.4 5.4 5.4 5.4 5.5 5.5 5.4 5.5 5.5 5.5 5.4 5.5 5.4 5.4 5.5 5.4 5.4 5.5 5.6
CCMAPQ >= 30 9.0 8.5 9.0 8.5 9.4 9.7 9.9 10.1 9.8 9.7 9.9 9.9 10.0 10.2 10.2 10.1 10.2 10.3 10.2 10.3 10.3 10.3 10.3 10.3 10.2 10.2 10.2 10.2 10.2 10.2 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.2 10.2 10.3 10.3 10.4 10.4 10.3 10.3 10.3 10.3 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.5 10.4 10.4 10.5 10.5 10.6
CCMAPQ >= 20 8.7 8.4 8.8 8.3 9.2 9.6 9.7 9.9 9.6 9.6 9.8 9.7 9.7 10.0 9.9 9.9 10.0 10.1 10.1 10.1 10.0 10.1 10.1 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.1 10.2 10.2 10.2 10.2 10.3 10.2 10.3 10.3 10.2 10.3 10.3 10.3 10.3 10.3 10.1 10.2 10.2 10.3 10.4 10.4 10.4 10.5 10.6 10.7 10.8 11.0 11.0 11.0 11.3 11.4 11.5 11.6 11.8 11.8 12.0 11.9 12.1 12.3 12.3 12.3
CCMAPQ >= 10 7.2 6.7 6.9 6.5 7.1 7.6 7.9 8.0 7.8 7.9 8.0 7.9 7.7 8.3 8.1 8.2 8.5 8.7 8.7 8.6 8.5 8.7 8.5 8.2 8.2 8.5 8.8 8.7 8.5 8.6 8.6 8.4 8.6 8.9 8.8 8.6 8.9 8.7 8.8 8.8 8.9 8.9 8.9 9.1 9.3 9.1 8.9 9.0 8.9 8.8 8.8 8.8 8.9 8.8 8.8 8.6 8.6 8.6 8.7 8.9 8.7 9.0 9.1 9.0 9.0 9.2 9.2 9.2 9.1 9.0 9.0 9.1 9.1 9.4
CCMAPQ >= 3 6.6 6.3 6.2 5.9 6.7 7.1 7.2 7.6 7.4 7.4 7.4 7.2 7.3 7.8 7.5 7.5 7.8 8.2 8.4 8.2 7.9 8.1 8.0 7.5 7.8 8.2 8.1 8.2 8.2 8.3 7.9 8.0 8.0 8.5 8.7 8.5 8.4 8.2 8.6 8.1 8.5 8.6 8.6 9.1 9.3 9.3 9.2 8.9 8.9 8.8 8.7 8.4 8.4 8.1 8.0 7.8 8.2 8.2 8.0 8.3 8.0 8.0 8.0 8.0 8.1 8.1 8.3 8.4 8.3 8.3 8.4 8.8 9.2 9.3
CCMAPQ < 3 8.5 8.1 8.5 8.1 8.9 9.3 9.4 9.7 9.4 9.3 9.4 9.5 9.5 9.7 9.6 9.6 9.8 9.8 9.8 9.8 9.8 9.8 9.8 9.8 9.7 9.8 9.8 9.8 9.8 9.9 9.9 9.8 9.9 9.9 9.9 9.8 9.9 9.9 9.9 9.8 9.9 9.9 10.0 10.0 10.0 10.0 10.0 10.0 9.9 10.0 10.0 9.9 10.0 9.9 9.9 9.9 9.9 9.9 9.9 10.0 10.0 10.0 10.1 10.1 10.0 10.0 10.1 10.1 10.1 10.0 10.1 10.2 10.2 10.3
CCUnmapped 6.4 6.3 6.5 6.1 6.8 6.8 6.9 7.1 6.9 6.8 6.9 6.7 6.7 7.1 7.0 7.0 7.2 7.1 7.1 7.3 7.2 7.2 7.2 7.3 7.3 7.3 7.3 12.1 7.4 7.5 7.5 7.6 7.8 12.6 7.9 7.9 7.9 8.1 8.2 8.3 8.3 8.3 8.2 8.3 8.4 8.4 8.5 8.6 8.4 8.5 8.6 8.7 13.5 8.9 8.8 9.0 9.0 9.0 9.1 9.2 9.1 9.2 9.3 9.3 9.3 9.3 9.3 9.4 9.4 9.3 9.3 9.4 9.5 9.6
CGMAPQ >= 30 5.5 3.6 4.9 5.6 5.1 6.3 5.5 6.3 6.3 6.2 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.3 6.2 6.2 6.2 6.2 6.3 6.2 6.2 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.2 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3
CGMAPQ >= 20 5.9 3.9 5.4 6.1 5.7 7.0 6.0 7.0 7.0 6.8 6.7 7.0 6.8 6.9 7.0 6.9 6.8 6.9 6.8 6.9 6.9 6.9 6.9 7.0 6.9 6.9 7.0 6.9 6.9 7.1 6.9 7.0 6.9 6.8 6.9 6.9 6.9 6.9 7.0 7.0 6.9 6.8 6.9 7.0 6.9 6.9 6.9 6.9 6.9 7.0 7.0 7.0 7.0 7.0 6.9 7.0 6.9 6.9 6.8 6.9 6.9 6.9 6.9 6.8 6.6 6.7 6.6 6.6 6.6 6.6 6.4 6.5 6.5 6.5
CGMAPQ >= 10 3.7 2.6 3.3 3.9 3.8 4.4 4.0 4.7 4.5 4.2 4.3 4.4 4.3 4.4 4.3 4.5 4.3 4.2 4.4 4.5 4.5 4.6 4.6 4.4 4.4 4.4 4.4 4.5 4.6 4.6 4.6 4.7 4.6 4.4 4.7 4.6 4.6 4.8 4.6 4.8 4.5 4.6 4.8 4.7 4.7 4.7 4.6 4.6 4.6 4.6 4.5 4.5 4.7 4.7 4.6 4.5 4.5 4.5 4.5 4.4 4.6 4.5 4.6 4.6 4.4 4.3 4.4 4.4 4.5 4.7 4.4 4.4 4.3 4.4
CGMAPQ >= 3 3.3 2.3 2.8 3.3 3.3 3.8 3.5 4.1 3.8 3.5 3.7 3.9 4.0 3.8 3.9 4.1 3.7 3.7 3.7 4.1 4.1 4.2 4.4 4.1 4.0 4.0 4.1 3.9 4.0 4.3 4.0 4.2 4.1 3.8 4.2 4.1 4.0 4.1 4.2 4.2 4.0 3.9 4.2 4.2 4.1 4.0 4.1 4.0 4.0 4.1 4.3 4.2 4.2 4.3 4.0 4.1 3.9 3.9 4.0 4.0 4.1 4.1 3.9 3.9 3.6 3.7 4.0 3.9 4.0 4.2 3.9 4.0 3.7 3.9
CGMAPQ < 3 5.0 3.3 4.4 5.1 4.7 5.7 5.0 5.8 5.7 5.6 5.6 5.7 5.6 5.6 5.6 5.6 5.5 5.6 5.5 5.6 5.6 5.7 5.7 5.7 5.7 5.7 5.6 5.6 5.6 5.7 5.6 5.7 5.7 5.6 5.6 5.6 5.6 5.7 5.7 5.7 5.7 5.6 5.7 5.7 5.7 5.7 5.7 5.7 5.8 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.8 5.8 5.8 5.7 5.7 5.7 5.8 5.7 5.8 5.9 5.8 5.8 5.7 5.7
CGUnmapped 5.3 3.6 5.0 10.3 5.2 6.3 5.3 6.2 6.2 6.0 6.0 11.0 6.0 6.1 6.1 6.1 6.1 6.2 6.2 6.1 6.1 6.2 6.1 6.2 6.1 6.2 6.3 6.2 11.0 6.3 6.1 6.2 6.1 6.1 10.9 6.1 6.0 6.0 6.1 6.0 6.1 5.9 6.0 6.0 6.0 6.0 10.7 5.9 6.1 6.0 6.0 6.0 6.0 10.8 6.0 5.9 5.9 5.9 5.9 5.9 5.9 5.8 5.9 5.8 5.8 5.8 5.8 5.8 5.8 5.9 5.8 5.9 5.8 5.9
CTMAPQ >= 30 7.8 6.9 7.1 7.1 6.7 7.2 7.1 7.3 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.2 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.2 7.2 7.1 7.2 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1
CTMAPQ >= 20 7.5 6.8 6.9 7.0 6.6 7.1 6.9 7.0 6.8 6.8 6.8 6.9 6.9 6.9 7.0 6.9 6.8 7.0 7.0 7.0 7.0 6.9 6.9 6.9 6.9 6.9 6.9 6.9 6.8 6.8 6.7 6.7 6.8 6.8 6.8 6.7 6.7 6.7 6.7 6.7 6.6 6.7 6.8 6.8 6.8 6.8 6.8 6.7 6.7 6.7 6.7 6.7 6.8 6.6 6.6 6.6 6.6 6.6 6.5 6.5 6.5 6.3 6.4 6.4 6.3 6.3 6.3 6.3 6.2 6.1 6.1 6.2 6.2 6.2
CTMAPQ >= 10 7.7 6.8 7.1 7.2 6.7 7.3 7.2 7.5 7.0 7.2 7.1 7.7 7.5 7.3 7.5 7.6 7.3 7.5 7.5 7.4 7.5 7.5 7.3 7.3 7.3 7.1 7.3 7.3 7.0 7.1 7.2 7.1 7.4 7.2 7.4 7.3 7.2 7.2 7.3 7.3 7.3 7.5 7.4 7.5 7.4 7.3 7.7 7.4 7.4 7.7 7.6 7.4 7.7 7.3 7.3 7.5 7.7 7.6 7.5 7.6 7.6 7.5 7.4 7.4 7.4 7.5 7.5 7.4 7.5 7.1 7.1 7.2 7.1 7.1
CTMAPQ >= 3 7.7 6.9 7.4 7.5 7.1 7.3 7.0 7.2 7.0 7.5 7.1 8.0 7.6 7.6 7.8 7.7 7.2 7.8 7.8 7.6 7.9 7.5 7.5 7.4 7.7 7.4 7.6 7.4 7.0 6.8 7.1 6.8 7.4 7.0 7.3 7.1 7.5 7.4 7.5 8.0 7.5 7.9 7.7 8.0 7.7 7.6 7.5 7.5 7.4 7.5 7.7 7.8 8.1 7.4 7.7 7.4 7.7 8.2 7.7 7.6 7.7 7.3 7.6 7.4 7.4 7.6 7.2 7.3 7.4 7.0 6.9 6.6 6.7 7.1
CTMAPQ < 3 7.8 6.9 7.1 7.2 6.8 7.2 7.1 7.3 7.1 7.1 7.1 7.3 7.2 7.2 7.3 7.2 7.1 7.3 7.3 7.3 7.3 7.3 7.2 7.2 7.2 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.2 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.1 7.2 7.3 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.3 7.3 7.3 7.2 7.2 7.2 7.3 7.3 7.2 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.2 7.1 7.0 7.1 7.1 7.1
CTUnmapped 6.2 5.7 5.8 5.8 5.6 5.9 5.8 5.8 5.6 5.7 5.6 5.5 5.5 5.5 5.6 5.5 5.5 5.5 5.5 5.4 5.4 5.4 5.4 5.3 5.3 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.0 5.1 5.0 5.0 5.1 5.1 9.8 5.1 5.0 5.0 5.0 4.9 5.0 5.0 4.9 4.9 4.9 4.9 9.6 4.9 4.9 9.6 4.9 4.8 9.5 4.8 4.8 4.8 4.8 4.7 4.7 4.7 4.7 4.7 4.8 4.7
GAMAPQ >= 30 6.3 6.9 6.5 6.4 6.4 6.2 6.1 5.7 6.0 6.0 5.9 6.0 5.9 6.0 5.9 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0
GAMAPQ >= 20 6.3 6.9 6.4 6.4 6.3 6.1 6.1 5.7 6.0 6.0 5.9 6.1 5.9 5.9 5.9 5.9 6.0 5.9 6.0 5.8 5.9 6.0 6.0 6.0 6.1 5.9 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 5.9 5.8 5.9 5.9 6.0 5.8 6.0 5.9 5.9 5.9 5.9 6.0 6.0 6.0 5.9 5.8 5.8 5.9 5.9 5.8 5.8 5.7 5.7 5.6 5.7 5.7 5.6 5.6 5.6 5.5 5.5 5.5 5.5 5.7 5.7 5.7 5.7 5.5
GAMAPQ >= 10 6.3 6.9 6.5 6.6 6.5 6.7 6.5 5.9 6.4 6.4 6.2 6.1 6.0 6.0 6.1 6.2 6.3 6.1 6.1 6.0 6.1 6.4 6.4 6.4 6.5 6.3 6.5 6.3 6.5 6.1 6.4 6.5 6.4 6.2 6.3 6.3 6.0 6.3 6.3 6.5 6.5 6.1 6.3 6.2 6.3 6.4 6.4 6.5 6.7 6.4 6.3 6.3 6.3 6.5 6.5 6.6 6.6 6.4 6.5 6.4 6.4 6.3 6.5 6.2 6.4 6.2 6.3 6.1 6.1 6.4 6.6 6.5 6.5 6.2
GAMAPQ >= 3 6.2 6.4 5.7 5.8 5.9 6.2 6.4 5.7 6.3 6.2 6.4 6.0 6.0 6.1 5.8 6.4 6.5 6.3 6.3 6.6 6.6 6.5 6.7 6.6 6.7 6.4 6.7 6.6 6.6 6.3 6.5 6.6 6.6 6.5 6.3 6.5 6.0 6.5 6.3 6.4 6.4 6.0 6.1 6.2 6.4 6.6 6.5 6.7 7.0 6.4 6.2 6.5 6.4 6.6 7.0 6.5 6.8 6.5 6.7 6.7 6.4 6.5 6.7 6.7 6.5 6.1 6.4 6.4 6.3 6.8 6.8 6.7 6.7 6.2
GAMAPQ < 3 6.4 7.0 6.5 6.4 6.4 6.3 6.3 5.8 6.0 6.2 6.1 6.1 6.0 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.1 6.2 6.2 6.2 6.2 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.3 6.2 6.2 6.2 6.3 6.3 6.3 6.3 6.4 6.3 6.2 6.2 6.2 6.3 6.3 6.3 6.3 6.2 6.3 6.2 6.3 6.2 6.2 6.2 6.2 6.1 6.2 6.2 6.2 6.2 6.2 6.2 6.1 6.1
GAUnmapped 11.1 6.2 5.7 5.8 5.8 10.6 5.7 5.2 10.4 5.7 5.6 5.9 5.6 5.6 5.6 5.6 5.6 5.5 5.6 5.5 5.7 5.5 10.3 5.6 5.6 5.6 5.6 5.6 5.6 10.4 5.7 10.3 5.5 5.5 5.4 5.5 10.2 5.4 5.4 5.4 5.4 10.1 5.4 5.3 5.4 5.4 5.3 5.4 5.5 5.5 5.4 5.5 5.3 5.4 5.4 5.4 5.5 5.4 5.4 5.5 5.6 5.6 5.5 5.5 5.6 10.2 5.7 5.6 5.7 5.8 5.7 5.7 5.7 5.9
GCMAPQ >= 30 7.0 7.7 7.7 7.9 8.7 8.0 8.9 8.5 8.6 8.8 8.8 8.8 8.8 8.8 8.8 8.8 8.9 8.8 8.8 8.8 8.9 8.8 8.8 8.8 8.8 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.8 8.8 8.9 8.9 8.9 8.9 8.9 8.8 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 9.0 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 9.0 8.9 8.9 8.9
GCMAPQ >= 20 7.4 8.2 8.3 8.5 9.5 8.5 9.6 9.1 9.3 9.5 9.5 9.4 9.6 9.6 9.5 9.5 9.6 9.6 9.6 9.6 9.7 9.7 9.7 9.6 9.6 9.6 9.6 9.6 9.6 9.6 9.7 9.7 9.5 9.6 9.5 9.5 9.6 9.6 9.5 9.6 9.5 9.6 9.6 9.7 9.6 9.5 9.6 9.5 9.6 9.6 9.6 9.7 9.6 9.5 9.6 9.5 9.5 9.4 9.5 9.4 9.3 9.3 9.3 9.1 9.1 9.1 9.1 9.0 9.0 8.9 9.0 8.9 8.9 8.8
GCMAPQ >= 10 6.2 6.4 6.7 6.7 7.3 6.9 7.5 7.0 7.1 7.3 7.4 7.4 7.6 7.4 7.6 7.4 7.4 7.5 7.6 7.7 7.8 7.6 7.7 7.6 7.5 7.8 7.6 7.6 7.8 7.8 8.1 8.0 7.7 7.8 7.8 7.9 8.0 7.8 8.0 7.8 7.9 7.9 7.7 8.1 7.8 8.0 7.8 7.9 7.5 7.7 7.6 7.9 7.6 7.6 7.9 7.7 7.6 7.5 7.7 7.8 7.9 7.8 7.7 7.5 7.7 7.7 7.9 7.7 7.5 7.7 8.0 7.6 7.7 7.5
GCMAPQ >= 3 6.1 6.2 6.7 6.6 7.0 6.5 7.2 6.7 6.9 7.0 6.8 7.0 6.9 6.9 6.9 6.9 6.8 6.9 6.9 7.0 7.3 7.2 7.1 7.4 7.0 7.0 6.7 6.8 7.1 6.8 7.3 7.2 7.0 7.5 7.2 7.4 7.3 7.4 7.5 7.3 7.4 7.5 7.0 7.4 7.0 7.1 6.6 7.0 6.7 7.2 7.0 7.3 6.9 6.9 7.5 7.4 7.2 6.9 7.0 7.1 7.0 7.4 7.3 6.8 7.0 7.3 7.4 7.7 7.5 7.6 7.7 7.5 7.5 7.4
GCMAPQ < 3 6.9 7.4 7.5 7.7 8.4 7.8 8.6 8.1 8.3 8.4 8.4 8.4 8.5 8.4 8.4 8.3 8.4 8.4 8.4 8.4 8.5 8.4 8.5 8.4 8.4 8.5 8.4 8.4 8.4 8.5 8.6 8.5 8.5 8.5 8.5 8.5 8.5 8.5 8.4 8.5 8.5 8.6 8.4 8.5 8.5 8.6 8.5 8.5 8.5 8.5 8.5 8.6 8.5 8.5 8.6 8.5 8.5 8.5 8.6 8.6 8.6 8.6 8.6 8.5 8.6 8.6 8.6 8.6 8.6 8.6 8.7 8.6 8.6 8.6
GCUnmapped 6.0 6.4 6.4 6.6 7.3 6.7 7.5 7.2 7.3 7.4 12.3 7.2 7.5 7.4 7.5 7.6 7.5 7.5 12.4 7.3 7.6 7.4 7.4 7.5 7.5 7.6 12.2 7.5 7.4 7.4 7.5 7.3 7.3 7.3 7.2 7.2 7.2 7.3 7.3 7.2 7.1 7.2 7.3 7.2 7.2 7.1 7.1 7.1 7.2 7.2 7.2 11.9 7.1 7.1 7.1 7.0 7.0 6.9 7.0 6.9 6.9 11.6 6.9 6.8 6.8 6.8 6.8 6.7 6.7 6.7 6.8 6.7 6.7 6.7
GGMAPQ >= 30 11.2 11.1 10.2 9.7 9.7 9.8 9.7 9.3 9.7 9.8 9.7 9.7 9.8 9.8 9.9 10.1 10.1 10.1 10.1 10.2 10.2 10.1 10.1 10.1 10.1 10.1 10.2 10.2 10.2 10.2 10.2 10.2 10.2 10.2 10.2 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.2 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.3 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.5 10.5 10.5 10.5 10.6 10.6 10.6 10.6 10.7 10.7 10.7
GGMAPQ >= 20 11.8 11.7 10.7 10.3 10.2 10.6 10.5 10.0 10.5 10.6 10.6 10.5 10.5 10.6 10.7 10.9 10.9 11.0 11.0 11.2 11.3 11.2 11.3 11.4 11.4 11.5 11.6 11.6 11.6 11.8 12.0 11.9 12.1 12.2 12.1 12.3 12.4 12.4 12.6 12.7 12.8 12.9 12.5 12.3 12.5 12.5 12.7 12.7 12.5 12.6 12.8 12.8 12.8 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.8 13.8 13.9 14.0 14.2 14.2 14.2 14.2 14.3 14.3 14.2 14.1 14.0 14.0
GGMAPQ >= 10 9.4 9.3 8.8 8.2 8.6 8.7 8.3 7.9 8.7 8.8 8.5 8.2 8.0 8.4 8.5 8.2 8.3 8.5 8.8 8.9 8.9 8.8 8.7 9.1 8.9 9.1 8.9 9.0 9.1 9.4 9.3 9.0 9.0 9.2 8.9 8.9 8.9 8.9 8.9 9.1 8.9 8.8 8.7 8.6 8.8 8.6 8.8 8.6 8.5 8.5 8.8 8.7 8.6 8.6 8.8 8.7 8.4 8.5 8.6 8.5 8.3 8.2 8.2 8.4 8.4 8.4 8.2 8.2 8.5 8.7 8.7 8.6 8.5 8.5
GGMAPQ >= 3 9.3 9.2 8.6 7.6 7.8 8.5 7.7 7.3 7.8 8.0 7.7 7.3 7.4 7.7 7.9 8.0 8.1 8.5 8.8 8.5 8.5 8.4 8.7 8.9 9.1 9.1 8.8 9.3 9.0 9.2 9.5 9.2 9.1 8.6 8.5 8.3 8.5 8.0 8.2 8.4 8.4 8.3 7.9 7.9 8.3 8.1 8.3 8.4 8.1 8.1 8.5 8.4 8.1 8.4 8.3 8.3 8.3 8.3 8.4 8.1 8.2 7.8 7.7 7.7 8.0 8.0 7.8 8.0 8.3 8.3 8.0 8.3 8.1 7.9
GGMAPQ < 3 10.8 10.6 9.8 9.3 9.4 9.5 9.3 8.9 9.4 9.5 9.4 9.3 9.4 9.5 9.5 9.6 9.6 9.7 9.8 9.8 9.8 9.7 9.7 9.9 9.9 9.9 9.9 9.9 10.0 10.0 10.1 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.9 10.0 9.9 9.8 9.8 9.9 9.8 9.9 9.9 9.8 9.8 9.9 9.8 9.8 9.9 9.8 9.8 9.8 9.9 9.9 10.0 9.9 9.8 9.9 9.9 10.0 10.0 10.0 10.1 10.1 10.2 10.2 10.2 10.2 10.2
GGUnmapped 8.4 8.0 7.2 7.1 11.9 7.2 7.2 6.9 7.4 7.5 7.4 7.5 12.4 7.6 7.8 7.8 7.9 8.1 8.3 8.8 8.7 13.5 8.9 9.0 9.1 8.9 9.1 9.3 9.5 10.0 9.8 9.8 10.0 10.0 10.1 15.0 10.4 10.3 10.5 10.6 10.7 10.9 10.5 10.5 10.5 10.5 10.6 10.7 10.5 10.6 10.7 10.7 10.7 10.8 11.0 11.0 11.1 11.2 11.2 11.3 11.3 11.2 11.3 11.4 11.4 11.5 11.4 11.4 11.4 11.3 11.3 11.3 11.4 11.3
GTMAPQ >= 30 5.5 4.9 4.6 4.8 4.7 4.6 4.9 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.5 4.6 4.6 4.6 4.6 4.6 4.5 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5
GTMAPQ >= 20 5.5 4.9 4.6 4.9 4.8 4.6 4.9 4.7 4.7 4.7 4.6 4.5 4.6 4.5 4.6 4.6 4.6 4.6 4.5 4.5 4.6 4.5 4.5 4.4 4.5 4.5 4.5 4.5 4.5 4.4 4.6 4.5 4.5 4.5 4.4 4.4 4.4 4.4 4.3 4.4 4.3 4.3 4.4 4.3 4.3 4.3 4.2 4.3 4.3 4.3 4.2 4.2 4.3 4.2 4.2 4.2 4.1 4.1 4.1 4.0 4.0 4.0 4.1 4.0 4.1 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.1 4.0
GTMAPQ >= 10 6.0 5.4 5.2 5.5 5.2 5.1 5.4 5.2 5.3 5.3 5.1 5.4 5.1 5.2 5.1 5.2 5.2 5.2 4.9 5.2 5.2 5.0 5.1 5.0 5.1 5.1 5.0 4.8 4.8 4.9 4.9 4.9 5.1 5.0 5.1 4.9 5.0 5.0 4.8 4.7 4.9 4.9 5.0 4.9 4.8 4.8 4.8 4.8 4.7 4.8 4.7 4.6 4.8 4.7 4.7 4.7 4.7 4.6 4.4 4.5 4.4 4.6 4.5 4.6 4.7 4.5 4.6 4.6 4.7 4.6 4.5 4.6 4.7 4.6
GTMAPQ >= 3 6.5 5.8 5.6 5.8 5.2 5.3 5.7 5.9 5.6 5.4 5.2 5.4 5.0 5.4 5.5 5.4 5.2 5.3 5.3 5.1 5.0 5.1 5.0 5.2 5.2 5.3 5.4 5.2 5.3 5.4 5.1 5.3 5.4 5.4 5.3 5.2 5.0 5.3 5.0 5.0 5.1 5.2 5.4 5.2 5.2 5.3 5.0 5.3 5.1 5.2 5.0 5.0 5.4 5.1 5.2 5.1 4.9 4.9 4.7 4.9 4.8 5.1 5.0 4.9 5.2 4.9 5.0 4.9 4.9 4.9 4.9 4.7 4.9 4.5
GTMAPQ < 3 5.6 5.0 4.7 4.9 4.8 4.7 5.0 4.8 4.7 4.8 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.8 4.8 4.8 4.7 4.7 4.8 4.8 4.8 4.7 4.7 4.7 4.8 4.8 4.8 4.8 4.7 4.7 4.6 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.6 4.6 4.6 4.7 4.6 4.7 4.7 4.7 4.6 4.6 4.7 4.6 4.6 4.6 4.5 4.5 4.6 4.6 4.5 4.5 4.5 4.6 4.5 4.5 4.6 4.5 4.5 4.5 4.6 4.5
GTUnmapped 5.9 4.9 4.5 4.8 4.6 4.6 4.8 4.6 4.6 4.7 4.6 4.5 4.7 9.4 4.6 4.6 4.6 4.6 4.6 4.4 4.6 4.5 4.5 4.4 4.5 4.5 4.4 4.5 4.4 4.4 4.5 4.4 4.4 4.5 4.4 4.3 4.4 4.4 4.3 4.3 4.3 4.4 4.4 4.3 4.4 4.3 4.3 9.0 4.3 4.3 4.3 4.3 4.2 4.3 8.9 4.2 4.2 4.2 4.2 4.2 4.2 4.2 4.2 4.1 4.1 4.2 4.2 4.1 4.1 4.1 4.1 4.1 4.1 4.1
TAMAPQ >= 30 2.8 3.5 3.4 3.5 3.3 3.1 3.0 3.0 3.1 3.0 3.0 3.0 2.9 3.0 3.0 3.0 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.8 2.9 2.9 2.9 2.9 2.8 2.8 2.8 2.9 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.9 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8
TAMAPQ >= 20 2.4 3.1 3.0 3.1 2.9 2.7 2.6 2.7 2.6 2.6 2.6 2.7 2.5 2.6 2.6 2.6 2.6 2.6 2.5 2.5 2.5 2.5 2.5 2.5 2.5 2.5 2.4 2.4 2.5 2.5 2.4 2.5 2.4 2.4 2.4 2.4 2.4 2.4 2.4 2.4 2.4 2.3 2.3 2.3 2.4 2.4 2.3 2.4 2.4 2.4 2.3 2.3 2.3 2.4 2.3 2.3 2.3 2.3 2.3 2.3 2.3 2.4 2.2 2.3 2.3 2.3 2.3 2.3 2.3 2.4 2.4 2.3 2.3 2.3
TAMAPQ >= 10 3.1 3.9 3.8 4.0 3.7 3.6 3.4 3.4 3.4 3.4 3.3 3.4 3.4 3.5 3.5 3.4 3.3 3.3 3.2 3.2 3.1 3.4 3.3 3.2 3.2 3.3 3.0 3.1 3.0 2.9 3.0 3.0 2.9 3.0 2.8 3.0 2.9 2.9 2.9 3.0 3.0 2.8 2.9 2.9 3.0 2.9 2.9 3.1 3.2 3.1 3.2 3.0 3.0 3.0 2.9 2.9 3.0 3.0 3.1 3.2 3.2 3.0 3.1 3.0 3.0 3.2 3.2 3.1 3.0 3.2 3.1 3.0 3.1 3.0
TAMAPQ >= 3 3.5 4.2 4.4 4.5 4.3 4.2 3.9 3.9 3.9 3.8 3.7 3.6 4.1 4.2 3.9 4.1 3.6 3.4 3.5 3.4 3.4 3.5 3.5 3.4 3.4 3.4 3.0 3.3 3.2 3.3 3.4 3.3 3.0 3.1 3.1 3.2 3.1 2.9 3.0 3.3 3.2 3.2 3.1 3.3 3.2 3.3 3.1 3.3 3.2 3.5 3.4 3.4 3.4 3.3 3.2 3.3 3.4 3.4 3.5 3.6 3.7 3.7 3.6 3.6 3.5 3.7 3.6 3.6 3.4 3.7 3.5 3.5 3.4 3.3
TAMAPQ < 3 2.6 3.3 3.2 3.4 3.1 2.9 2.9 2.9 2.9 2.9 2.8 2.9 2.8 2.9 2.9 2.9 2.8 2.8 2.8 2.8 2.7 2.8 2.8 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.7 2.7 2.7 2.6 2.6 2.7 2.7 2.7 2.6 2.6 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.6
TAUnmapped 3.5 4.7 4.5 4.6 4.5 4.2 4.2 4.3 4.2 4.1 4.1 4.3 4.0 4.1 4.0 4.0 4.0 4.0 4.0 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.7 3.7 3.8 3.7 3.8 3.8 3.8 8.5 3.8 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.8 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.8
TCMAPQ >= 30 3.8 6.1 6.1 5.9 6.3 5.9 6.4 6.3 6.2 6.1 6.2 6.1 6.1 6.1 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.1 6.1 6.0 6.1 6.0 6.0 6.0 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.0 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0
TCMAPQ >= 20 3.7 6.1 6.1 5.9 6.3 5.7 6.3 6.2 6.1 6.0 6.1 6.0 6.0 6.0 6.0 5.9 5.9 5.9 6.0 5.9 5.9 5.9 5.9 5.9 5.9 5.9 5.9 5.8 5.9 5.8 5.7 5.7 5.7 5.8 5.8 5.8 5.7 5.7 5.7 5.7 5.7 5.7 5.8 5.9 5.8 5.7 5.8 5.8 5.7 5.8 5.8 5.8 5.7 5.7 5.6 5.6 5.7 5.6 5.6 5.5 5.5 5.5 5.4 5.4 5.5 5.4 5.4 5.5 5.4 5.3 5.3 5.4 5.4 5.5
TCMAPQ >= 10 3.9 6.4 6.4 6.3 6.7 6.0 6.8 6.8 6.7 6.3 6.8 6.5 6.9 6.6 6.8 6.6 6.7 6.7 6.8 6.6 6.6 6.3 6.3 6.3 6.6 6.5 6.6 6.5 6.6 6.3 6.1 6.3 6.3 6.6 6.5 6.6 6.5 6.4 6.4 6.4 6.5 6.5 6.9 6.8 6.8 6.5 6.6 6.9 6.6 6.7 6.7 6.8 6.7 6.6 6.4 6.6 6.7 6.8 6.8 6.3 6.5 6.3 6.2 6.3 6.5 6.4 6.4 6.3 6.1 6.2 6.0 6.0 6.2 6.1
TCMAPQ >= 3 4.1 6.4 6.6 6.8 7.2 6.2 7.1 6.7 6.8 6.5 7.1 6.7 7.1 6.4 6.7 6.6 6.9 6.7 6.8 6.9 6.9 6.5 6.3 6.6 6.6 6.7 6.9 6.7 6.7 6.5 6.0 6.3 6.3 6.7 6.7 6.7 6.5 6.6 6.8 6.4 6.8 6.6 7.5 7.3 7.0 6.6 6.9 6.9 6.8 6.9 6.7 6.9 6.9 7.0 6.3 6.7 6.7 6.8 7.0 6.4 6.1 6.1 5.8 6.2 6.4 6.2 6.1 5.7 5.8 5.7 5.5 5.4 5.7 5.9
TCMAPQ < 3 3.9 6.4 6.4 6.2 6.6 6.1 6.7 6.6 6.5 6.3 6.4 6.4 6.5 6.4 6.3 6.4 6.4 6.3 6.4 6.4 6.4 6.3 6.4 6.3 6.4 6.3 6.3 6.4 6.4 6.3 6.2 6.3 6.3 6.4 6.3 6.4 6.3 6.3 6.3 6.3 6.3 6.3 6.4 6.4 6.4 6.3 6.3 6.4 6.3 6.3 6.3 6.4 6.4 6.3 6.2 6.3 6.4 6.3 6.4 6.3 6.3 6.2 6.2 6.2 6.2 6.3 6.2 6.2 6.2 6.1 6.1 6.1 6.1 6.2
TCUnmapped 3.2 5.8 10.7 5.7 6.0 5.5 5.9 5.8 5.7 5.5 5.6 5.4 5.5 5.5 5.5 10.3 5.4 5.4 5.4 5.4 5.3 5.3 5.4 5.3 5.3 5.3 5.2 5.3 5.3 5.1 5.1 5.2 5.2 5.2 5.2 5.2 5.1 5.2 9.9 5.1 5.1 5.1 5.2 10.0 5.2 9.9 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 9.7 5.0 5.1 9.9 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.0 5.0 5.1 5.1 5.2
TGMAPQ >= 30 4.8 6.3 6.3 6.5 6.3 6.2 5.9 6.3 6.4 6.1 6.1 6.1 6.1 6.1 6.2 6.2 6.2 6.1 6.1 6.2 6.1 6.1 6.2 6.1 6.1 6.2 6.2 6.1 6.2 6.2 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.0 6.0 6.0 6.0
TGMAPQ >= 20 5.0 6.7 6.6 6.8 6.6 6.5 6.1 6.6 6.6 6.3 6.3 6.3 6.3 6.4 6.3 6.5 6.4 6.3 6.3 6.4 6.3 6.4 6.3 6.3 6.3 6.3 6.4 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.2 6.2 6.2 6.2 6.1 6.1 6.0 6.0 6.2 6.1 6.1 6.0 6.0 6.0 6.0 6.0 5.9 6.0 6.1 6.0 5.9 5.9 5.9 5.9 5.8 5.7 5.8 5.7 5.8 5.7 5.7 5.7 5.6 5.7 5.7 5.5 5.5 5.5 5.6
TGMAPQ >= 10 5.6 7.4 7.3 7.6 7.5 7.2 6.8 7.6 7.5 6.9 6.9 7.0 7.4 7.3 6.9 7.4 7.4 7.2 7.3 7.3 7.1 7.4 7.2 7.1 7.3 7.1 7.1 7.2 7.1 7.2 7.2 7.1 7.2 7.2 7.2 7.1 7.2 7.2 7.4 7.1 7.1 7.0 7.3 7.2 7.1 7.2 7.0 7.0 6.9 6.8 7.0 6.9 7.0 7.3 7.0 7.0 6.9 7.0 7.0 6.9 6.8 7.0 7.0 7.0 6.9 6.9 6.8 6.9 7.2 7.2 7.0 6.8 6.9 6.8
TGMAPQ >= 3 5.9 7.3 7.2 7.5 7.6 7.4 6.9 7.7 7.5 6.9 6.7 6.7 7.3 7.2 7.0 7.4 7.4 7.2 7.1 7.3 6.8 7.3 7.0 7.2 7.2 6.9 7.4 7.3 7.3 7.4 7.1 7.0 7.1 7.3 7.4 7.2 7.2 7.6 7.7 7.5 7.5 7.3 7.3 7.5 7.5 7.3 7.2 7.1 7.3 6.7 7.0 6.9 7.1 7.7 7.4 7.1 6.9 6.9 7.2 7.1 6.9 7.2 7.2 7.5 7.3 7.3 7.6 7.5 7.7 7.6 7.5 7.3 6.8 7.1
TGMAPQ < 3 5.2 6.8 6.7 7.0 6.7 6.7 6.3 6.8 6.8 6.5 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.5 6.7 6.6 6.6 6.6 6.6 6.6 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.7 6.7 6.6 6.5 6.6 6.6 6.6 6.6 6.5 6.6 6.6 6.5 6.5 6.6 6.5 6.6 6.5 6.5 6.5 6.5 6.5 6.5 6.4 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.4 6.4 6.4 6.4
TGUnmapped 4.2 5.9 6.1 6.2 6.1 5.9 5.7 6.1 6.1 5.9 6.0 6.0 5.8 6.1 6.0 5.9 6.0 6.0 6.0 5.9 5.8 5.8 5.9 5.9 5.7 10.6 5.9 5.8 5.9 5.7 5.6 5.7 5.7 5.6 5.6 5.6 5.5 5.6 5.6 5.5 5.5 5.4 5.4 5.6 5.5 5.4 5.5 5.5 5.5 5.5 10.2 5.4 5.5 5.5 5.4 5.4 5.4 5.3 5.4 5.3 10.0 5.4 5.3 5.3 10.0 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.2
TTMAPQ >= 30 4.2 5.9 5.8 5.5 5.4 5.4 5.6 5.7 5.6 5.5 5.5 5.5 5.5 5.4 5.3 5.3 5.2 5.1 5.1 5.1 5.1 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.0 5.0 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.1 5.1 5.1 5.0 5.0 5.1 5.1 5.1
TTMAPQ >= 20 4.1 5.8 5.7 5.3 5.1 5.2 5.4 5.3 5.2 5.1 5.1 5.1 5.0 5.1 5.0 4.9 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.6 4.6 4.6 4.6 4.5 4.5 4.5 4.5 4.6 4.6 4.6 4.6 4.6 4.6 4.5 4.5 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.5 4.5 4.6 4.6 4.7 4.6 4.6 4.7 4.7 4.7 4.7 4.7 4.8 4.8 4.8 4.9 4.9 4.9 4.9 4.9 4.8 4.7 4.7 4.7 4.7 4.7
TTMAPQ >= 10 5.9 7.6 7.6 7.2 6.8 6.7 6.9 6.6 6.5 6.4 6.5 6.5 6.6 6.4 6.4 6.1 6.0 6.0 5.9 5.7 5.8 5.7 5.7 5.8 5.7 5.6 5.6 5.6 5.6 5.4 5.4 5.4 5.5 5.5 5.5 5.6 5.5 5.5 5.4 5.4 5.3 5.5 5.6 5.4 5.4 5.2 5.2 5.1 5.0 5.0 5.3 5.4 5.3 5.3 5.3 5.3 5.3 5.4 5.3 5.2 5.4 5.4 5.5 5.5 5.6 5.5 5.5 5.6 5.6 5.5 5.3 5.5 5.5 5.8
TTMAPQ >= 3 6.1 8.2 8.2 8.0 7.4 7.1 7.3 6.8 7.0 7.0 7.0 7.2 7.1 6.7 6.6 6.7 6.7 6.4 6.5 6.3 6.2 6.0 5.9 5.8 5.7 6.0 5.9 6.0 5.7 5.3 5.5 5.5 5.6 5.9 5.8 5.8 5.9 5.9 5.9 5.7 5.9 6.1 6.2 5.8 5.5 5.5 5.5 5.2 5.2 5.2 5.4 5.6 5.5 5.5 5.5 5.6 5.5 5.5 5.6 5.5 5.6 5.4 5.6 5.6 5.6 5.8 5.7 5.4 5.4 5.3 5.2 5.4 5.5 5.9
TTMAPQ < 3 4.6 6.3 6.2 5.9 5.7 5.7 5.9 5.9 5.8 5.7 5.7 5.7 5.7 5.6 5.5 5.4 5.4 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.1 5.0 5.0 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.0 5.1 5.1 5.1 5.1 5.0 5.1 5.0 4.9 4.9 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.0 5.0 4.9 5.0 5.0 5.1 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.1
TTUnmapped 4.3 7.1 7.2 7.1 7.0 7.1 7.5 7.5 7.3 7.3 7.3 7.3 7.3 7.4 12.2 7.3 7.3 7.3 7.2 7.3 7.3 7.4 7.4 7.4 7.3 7.3 7.3 7.2 7.1 7.0 7.0 7.1 7.1 7.1 7.2 7.1 7.2 7.1 7.1 7.1 7.0 7.1 7.1 7.2 7.1 7.1 7.1 7.1 6.9 6.8 6.8 6.9 6.8 6.8 6.8 6.7 6.8 11.5 6.7 6.6 6.6 6.6 6.6 11.3 6.5 6.5 6.6 6.6 6.5 6.4 6.4 6.5 6.5 6.4
Percentage of 2-mers at each position of the read for each alignment quality interval. Numbers shown in bold corresponds to p-values of <= 1e-100.

Error Distribution

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3

Nucleotide Composition MAPQ >= 30

A C G T N

Nucleotide Composition MAPQ >= 20

A C G T N

Nucleotide Composition MAPQ >= 10

A C G T N

Nucleotide Composition MAPQ >= 3

A C G T N

Nucleotide Composition MAPQ < 3

A C G T N

Nucleotide Composition Unmapped

A C G T N

Length Distribution MAPQ >= 30

Length Distribution MAPQ >= 20

Length Distribution MAPQ >= 10

Length Distribution MAPQ >= 3

Length Distribution MAPQ < 3

Length Distribution Unmapped

Top 5 over-represented 2-mers MAPQ >= 30

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

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CT

CA

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CC

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AG

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AG

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CT

AG

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CT

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AG

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GG

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CT

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CT

AG

CC

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AG

CT

CC

GG

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CT

AG

CC

GG

GC

CT

AG

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GG

GC

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AG

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GG

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CT

AG

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GG

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AG

CC

GG

GC

AG

CT

CC

GG

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AG

CT

CC

GG

GC

AG

CT

CC

GG

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AG

CT

CC

GG

GC

AG

CT

CC

GG

GC

AG

CT

CC

GG

GC

AG

CT

CC

GG

GC

CT

AG

CC

GG

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CT

AG

CC

GG

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CT

AG

CC

GG

GC

AG

CT

CC

GG

GC

CT

AG

GG

CC

GC

AG

CT

GG

CC

GC

AG

CT

GG

CC

GC

CT

AG

GG

CC

GC

AG

CT

GG

CC

GC

AG

CT

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

GG

CC

GC

AG

CT

GG

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GC

AG

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GG

CC

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AG

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GG

CC

GC

AG

CT

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

AG

CT

GG

CC

GC

CT

AG

GG

CC

GC

CT

AG

GG

CC

GC

CT

AG

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CC

GC

CT

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CC

GC

CT

AG

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CT

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GC

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CC

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CT

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CC

GC

AG

CT

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CC

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CT

AG

GG

CC

GC

CT

AG

GG

CC

GC

CT

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 20

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

AG

CC

CT

GC

GG

CC

GC

AG

GA

GG

CC

GC

AG

CT

GG

GC

CC

AG

CT

GG

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CT

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CT

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CT

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CG

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CG

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GG

CC

GC

CG

AG

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CC

GC

CG

CT

GG

CC

GC

CG

CT

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CC

GC

CG

AG

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CC

GC

CG

CT

GG

CC

GC

CG

CT

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CC

GC

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AG

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CC

GC

CG

AG

GG

CC

GC

CG

CT

GG

CC

GC

CG

AG

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CC

GC

CG

CT

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CC

GC

CG

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GG

CC

GC

CG

AG

GG

CC

GC

CG

AG

GG

CC

GC

CG

AG

GG

CC

GC

AG

CG

GG

CC

GC

CG

AG

GG

CC

GC

CG

AG

GG

CC

GC

CG

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 10

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

AG

CA

CT

CC

GG

AG

TT

TG

GA

GG

TT

AG

TG

CT

GG

AG

TG

CT

TT

GG

AG

TG

GC

CC

GG

CC

AG

CT

TG

GG

CC

GC

CT

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CC

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TG

CT

AG

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CC

TG

AG

CA

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GC

CT

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GC

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TG

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CT

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GC

TG

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GC

TG

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CT

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GC

CT

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CC

GC

CT

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GG

CC

GC

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GG

CC

GC

CT

TG

GG

CC

GC

AG

CT

GG

CC

GC

AG

CA

GG

CC

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GC

CT

GG

CC

GC

AG

TG

GG

CC

GC

AG

CT

GG

CC

GC

AG

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GG

CC

GC

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GG

CC

GC

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GG

CC

GC

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AG

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AG

CT

GG

CC

GC

TG

AG

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CC

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CT

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GC

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GG

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CT

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GG

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CT

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CT

AG

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GC

CT

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CT

GC

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CT

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GC

CT

AG

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GG

CT

GC

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CT

GG

CC

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CT

AG

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CC

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CT

CA

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CT

GC

AG

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GG

CT

GC

AG

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GC

CT

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GG

GC

CT

CA

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GG

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CT

AG

CC

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CA

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CT

CA

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CT

CA

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GC

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GG

GC

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GC

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TG

CC

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AG

CA

CC

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GC

AG

CA

CC

GG

GC

AG

CA

CC

GG

GC

AG

CT

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

AG

CA

CT

AA

GG

TT

AG

TG

CT

GG

TT

CT

TG

AG

TT

GG

CT

TG

AG

GG

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TC

GG

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CC

GC

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GC

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CT

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CA

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GC

CT

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CT

TG

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CT

GC

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CC

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CT

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GC

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CT

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GC

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CC

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AG

GC

TG

CC

GG

GC

AG

CA

CC

GG

GC

AG

CT

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ < 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

AG

CC

CT

CA

GG

CC

AG

GC

GA

GG

CC

GC

AG

CT

GG

CC

GC

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GC

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CT

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CT

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers Unmapped

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GA

AA

GG

AG

AT

AT

GG

AA

TT

GC

TC

AA

TT

GG

CC

CG

TT

GG

AA

GC

GG

GC

AA

TT

CC

GA

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TT

AA

CC

AA

GC

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GG

CC

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GC

AA

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AA

CC

GT

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CC

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GG

GC

CC

AA

TC

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GC

TT

CC

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AG

GG

GC

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CC

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AA

GA

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CC

AT

GG

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CC

TG

GG

GC

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GC

GG

CC

TT

AA

CC

GG

GC

TT

AA

CG

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GC

CC

TT

GA

GG

CC

GC

TT

AG

GG

GC

CC

TT

GA

GG

CC

GC

TT

GG

AC

CC

GC

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CC

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GC

TT

AA

CG

GG

CC

GC

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GG

CC

GC

TT

AA

GG

GA

CC

GC

TT

GG

AT

CC

GC

TT

GG

TC

CC

GC

TT

GG

CA

CC

GC

TT

GG

AG

CC

GC

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GG

GA

CC

GC

TT

GG

AT

CC

GC

TT

GG

TC

CC

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TT

GG

CT

CC

GC

TT

GG

TC

CC

TT

GC

CG

GG

CC

TT

GC

GG

GT

CC

GC

TT

GG

TA

CC

GC

TT

GG

AT

CC

GC

TT

GG

TG

CC

GC

TT

GC

GG

CC

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AA

CC

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GC

TT

AA

GG

CG

CC

GC

TT

GG

GT

CC

GC

TT

GG

TC

CC

GC

TT

GG

CT

CC

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TT

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GG

CC

GC

AA

GG

TC

CC

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TT

GG

CT

CC

GC

AA

GG

TG

CC

GC

AA

GC

GG

CC

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TT

GG

CT

CC

GC

AA

GG

TT

CC

GC

AA

GG

TG

CC

GC

AA

GG

GA

CC

GC

AA

GG

AA

CC

GC

TT

AA

GG

CC

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TT

AA

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CC

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TT

AA

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CC

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GG

AA

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AA

CC

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TT

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CC

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TT

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AA

CC

GC

TT

 
Top 5 enriched 2-mers at each positon withion reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 20 over-represented 10-mers

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3 Unmapped
SeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-value
CCGCCGCCGC 759954 0.0e+00 GGGGGGGGGG 82187 0.0e+00 GGAGGCTGAG 26137 0.0e+00 CTCCTGACCT 6476 0.0e+00 CTCCTGACCT 48430 0.0e+00 TTTTTTTTTT 1520587 0.0e+00
CGCCGCCGCC 742495 0.0e+00 TTTTTTTTTT 81009 0.0e+00 GAGGCTGAGG 25866 0.0e+00 TCCTGACCTC 5889 0.0e+00 GAGGCTGAGG 47733 0.0e+00 GGGGGGGGGG 1440869 0.0e+00
GCCGCCGCCG 677616 0.0e+00 AAAAAAAAAA 78714 0.0e+00 AGGCTGAGGC 25057 0.0e+00 GAGGCTGAGG 5635 0.0e+00 GGAGGCTGAG 47698 0.0e+00 CCCCCCCCCC 1247998 0.0e+00
CGGCGGCGGC 622491 0.0e+00 CCCCCCCCCC 46717 0.0e+00 GGCTGAGGCA 24113 0.0e+00 GGAGGCTGAG 5614 0.0e+00 AGGCTGAGGC 45466 0.0e+00 AAAAAAAAAA 976791 0.0e+00
CTGTAATCCC 420275 0.0e+00 GGCGGGGGGG 44889 0.0e+00 GCTGAGGCAG 23769 0.0e+00 AGGCTGAGGC 5519 0.0e+00 TCCTGACCTC 43926 0.0e+00 GATCGGAAGA 517886 0.0e+00
GCCTGTAATC 365917 0.0e+00 GCGGGGGGGG 35929 0.0e+00 TCCCAGCTAC 23228 0.0e+00 CTGAGGCAGG 5284 0.0e+00 CCCAGCTACT 43011 0.0e+00 ATCGGAAGAG 509962 0.0e+00
CAGGCTGGAG 332102 0.0e+00 GCGGCGGCGG 33934 0.0e+00 CTGAGGCAGG 23066 0.0e+00 TCCCAGCTAC 5231 0.0e+00 GGCTGAGGCA 42424 0.0e+00 TCGGAAGAGC 499310 0.0e+00
GAGGAGGAGG 317460 0.0e+00 CGGGGGGGGG 31143 0.0e+00 CCCAGCTACT 22953 0.0e+00 GCTGAGGCAG 5218 0.0e+00 GCTGAGGCAG 42278 0.0e+00 CGGAAGAGCG 494298 0.0e+00
GCCCAGGCTG 312813 0.0e+00 GAGGCTGAGG 30366 0.0e+00 TAATCCCAGC 22224 0.0e+00 GGCTGAGGCA 5211 0.0e+00 CTGAGGCAGG 42199 0.0e+00 GGAAGAGCGG 490872 0.0e+00
AGGCTGGAGT 309172 0.0e+00 GGAGGCTGAG 30128 0.0e+00 AAAAAAAAAA 22129 0.0e+00 CCCAGCTACT 5163 0.0e+00 TCCCAGCTAC 42080 0.0e+00 GAAGAGCGGT 479947 0.0e+00
CCTCCTCCTC 305835 0.0e+00 TAATCCCAGC 29534 0.0e+00 TGAGGCAGGA 22060 0.0e+00 TGAGGCAGGA 5111 0.0e+00 GCTCACTGCA 40735 0.0e+00 AAGAGCGGTT 473771 0.0e+00
GGCTGGAGTG 304085 0.0e+00 ACACACACAC 29465 0.0e+00 GAGGCAGGAG 21912 0.0e+00 GAGGCAGGAG 5050 0.0e+00 TAATCCCAGC 40043 0.0e+00 AGAGCGGTTC 467418 0.0e+00
CTCCTCCTCC 302812 0.0e+00 CACACACACA 28757 0.0e+00 AGGCAGGAGA 21907 0.0e+00 GGCAGGAGAA 5038 0.0e+00 TGAGGCAGGA 39926 0.0e+00 GAGCGGTTCA 462114 0.0e+00
CTGGAGTGCA 300329 0.0e+00 TGTAATCCCA 28632 0.0e+00 CTCAGCCTCC 21883 0.0e+00 AGGCAGGAGA 5035 0.0e+00 CCTCAGCCTC 39834 0.0e+00 AGCGGTTCAG 457509 0.0e+00
GGGGGAGGGG 283540 0.0e+00 GTAATCCCAG 28398 0.0e+00 CCTCAGCCTC 21839 0.0e+00 GCAGGAGAAT 4901 0.0e+00 GGGAGGCTGA 39791 0.0e+00 GCGGTTCAGC 452137 0.0e+00
GATTACAGGC 275862 0.0e+00 CTGTAATCCC 28239 0.0e+00 GGCAGGAGAA 21765 0.0e+00 CCTCAGCCTC 4710 0.0e+00 GAGGCAGGAG 39486 0.0e+00 CGGTTCAGCA 450448 0.0e+00
CCCCCTCCCC 260909 0.0e+00 AGGCTGAGGC 28138 0.0e+00 GTAATCCCAG 21416 0.0e+00 CTCAGCCTCC 4658 0.0e+00 TGTAATCCCA 39335 0.0e+00 GGTTCAGCAG 448232 0.0e+00
GGCTGAGGCA 258846 0.0e+00 CCTGTAATCC 28050 0.0e+00 GCAGGAGAAT 21393 0.0e+00 GCCTCAGCCT 4623 0.0e+00 CTCAGCCTCC 39269 0.0e+00 GTTCAGCAGG 445119 0.0e+00
AGGAGGAGGA 253552 0.0e+00 GGCGGCGGCG 27755 0.0e+00 TGTAATCCCA 21193 0.0e+00 GGGAGGCTGA 4535 0.0e+00 AGGCAGGAGA 39143 0.0e+00 TTCAGCAGGA 440852 0.0e+00
CCAGCCTGGG 252298 0.0e+00 GCGGCGGGGG 26345 0.0e+00 GCCTCAGCCT 21054 0.0e+00 TTCTCCTGCC 4510 0.0e+00 CTGTAATCCC 38913 0.0e+00 TCAGCAGGAA 439124 0.0e+00