ezh2_y641n_k36

Mapping stats: 96% aligned (93.7M aligned out of 97.4M total) 

Number of alignments in various mapping quality (MAPQ) intervals and number of unmapped sequences. The percentage and number of alignments in each category is given in brackets.

Mean Base Quality

Mean base quality of reads with low and high mapping quality.

Error Profile MAPQ >= 30

Mismatches Insertions Deletions

Error Profile MAPQ >= 20

Mismatches Insertions Deletions

Error Profile MAPQ >= 10

Mismatches Insertions Deletions

Error Profile MAPQ >= 3

Mismatches Insertions Deletions

Error Profile MAPQ < 3

Mismatches Insertions Deletions

Nucleotide Over-representation along read

Mer Q 1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
AAMAPQ >= 30 10.0 9.6 8.9 8.5 8.6 8.6 8.7 8.5 8.5 8.6 8.6 8.5 8.4 8.4 8.2 8.1 8.1 8.0 8.0 8.0 8.0 8.0 8.0 8.0 8.1 8.0 8.0 8.0 8.0 8.0 7.9 7.9 8.0 7.9 7.9 7.9 8.0 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 8.6 8.6 7.9 7.9 7.9 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.9 7.9 7.8 7.8 7.9 7.8 7.8 7.8 7.9 7.8 7.8
AAMAPQ >= 20 9.0 8.7 7.9 7.5 7.8 7.8 7.8 7.6 7.6 7.9 7.8 7.7 7.5 7.4 7.4 7.4 7.2 7.1 7.2 7.1 7.1 7.1 7.2 7.2 7.3 7.2 7.1 7.1 7.1 7.2 7.2 7.1 7.2 7.2 7.2 7.2 7.3 7.3 7.2 7.2 7.3 7.2 7.1 7.1 7.2 7.3 7.3 7.4 7.4 7.4 7.4 8.2 8.2 7.6 7.7 7.7 7.7 7.6 7.7 7.9 7.8 7.9 8.0 8.0 8.1 8.0 7.9 8.0 7.9 7.9 7.9 7.9 7.8 7.8
AAMAPQ >= 10 7.9 7.6 7.0 6.5 6.8 6.7 6.8 6.5 6.7 7.0 7.0 6.9 6.6 6.4 6.3 6.4 6.3 6.2 6.4 6.3 6.2 6.3 6.3 6.3 6.5 6.3 6.3 6.2 6.2 6.2 6.2 6.1 6.3 6.3 6.2 6.4 6.6 6.5 6.6 6.4 6.7 6.4 6.2 6.3 6.4 6.7 6.7 6.7 6.8 6.8 6.8 7.7 7.6 6.9 7.1 7.0 7.2 7.0 7.0 7.3 7.3 7.4 7.5 7.6 7.5 7.5 7.5 7.6 7.5 7.6 7.7 7.8 7.8 7.8
AAMAPQ >= 3 8.0 7.8 7.2 6.8 6.9 6.8 7.1 6.9 7.4 7.4 7.3 7.1 6.8 6.7 6.6 6.8 6.7 6.4 6.3 6.0 6.0 6.2 6.1 6.1 6.3 6.1 6.2 6.2 6.3 6.4 6.6 6.7 6.6 6.7 6.6 6.6 7.0 7.0 6.9 6.6 6.7 6.5 6.3 6.4 6.5 7.0 7.3 7.2 7.2 7.3 7.2 8.0 7.9 7.4 7.6 7.5 7.5 7.3 7.3 7.5 7.5 7.9 8.1 8.0 7.9 7.7 7.7 7.9 7.9 8.0 8.2 8.2 8.1 8.0
AAMAPQ < 3 9.2 8.9 8.2 7.7 7.9 7.9 8.0 7.8 7.7 8.0 8.1 8.0 7.8 7.7 7.6 7.6 7.6 7.4 7.4 7.4 7.4 7.4 7.4 7.5 7.6 7.5 7.4 7.5 7.4 7.5 7.5 7.4 7.5 7.5 7.4 7.5 7.6 7.6 7.6 7.5 7.6 7.5 7.4 7.5 7.5 7.7 7.7 7.6 7.6 7.7 7.7 7.8 7.8 7.8 7.9 7.9 7.9 7.8 7.8 7.8 7.8 8.0 8.1 8.0 8.0 8.0 8.1 8.1 8.0 8.1 8.0 8.0 8.0 7.9
AAUnmapped 11.0 10.6 9.7 9.1 9.6 9.9 11.6 9.8 9.5 10.1 10.3 10.4 10.4 10.0 10.3 10.3 10.3 10.1 9.9 10.2 10.3 10.2 10.2 11.7 10.2 10.2 10.1 10.0 9.8 10.1 10.3 10.2 10.0 9.8 10.0 10.1 10.0 9.8 9.6 9.8 9.8 9.7 9.6 9.4 9.5 9.6 9.5 9.3 9.0 9.1 9.2 7.6 7.5 8.8 9.1 9.2 9.0 8.8 8.6 8.8 8.9 8.9 8.8 8.6 8.7 8.8 10.4 10.3 10.2 10.3 10.3 10.1 9.6 9.4
ACMAPQ >= 30 5.2 5.0 5.0 5.1 5.3 5.1 5.3 5.0 5.1 5.1 5.2 5.1 5.2 5.1 5.2 5.2 5.2 5.2 5.1 5.2 5.2 5.1 5.2 5.1 5.1 5.2 5.1 5.1 5.2 5.1 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.2 5.1 5.2 5.2 5.2 4.4 6.1 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.2 5.1
ACMAPQ >= 20 5.1 5.0 4.9 5.1 5.3 5.1 5.2 5.0 5.1 5.0 5.1 5.1 5.2 5.2 5.3 5.2 5.3 5.2 5.1 5.2 5.3 5.1 5.2 5.1 5.1 5.2 5.1 5.0 5.1 5.1 5.1 5.3 5.2 5.2 5.1 5.2 5.1 5.2 5.2 5.2 5.3 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.2 5.2 5.1 4.4 6.2 5.1 5.1 5.1 5.1 5.2 5.3 5.2 5.4 5.3 5.3 5.3 5.2 5.2 5.2 5.1 5.1 5.0 5.1 5.1 5.2 5.2
ACMAPQ >= 10 4.8 4.7 4.6 4.9 5.2 5.0 5.2 4.8 4.9 4.9 5.0 4.9 5.1 5.1 5.2 5.1 5.2 5.0 4.9 5.0 5.2 5.0 5.0 4.9 5.0 5.1 4.9 4.9 5.1 5.0 5.1 5.3 5.2 5.2 4.9 5.2 5.0 5.1 5.1 5.1 5.2 5.1 5.0 4.9 4.9 4.9 5.0 5.0 5.2 5.2 5.0 4.5 6.2 5.0 5.2 5.1 5.1 5.4 5.4 5.3 5.7 5.4 5.4 5.4 5.4 5.2 5.1 5.1 5.1 5.0 5.1 5.2 5.2 5.3
ACMAPQ >= 3 4.7 4.7 4.6 5.0 5.0 4.8 5.1 4.6 5.0 5.0 5.1 5.0 5.2 5.1 5.3 4.9 5.0 4.9 5.0 4.9 5.2 5.1 5.1 5.0 5.1 5.1 5.0 5.1 5.1 5.2 5.2 5.3 5.2 5.2 4.9 5.2 4.9 5.2 5.2 5.1 5.4 5.2 5.1 5.0 5.0 5.0 5.1 4.9 5.2 5.1 5.1 4.5 6.1 4.9 4.9 4.9 5.0 5.3 5.3 5.3 5.5 5.3 5.3 5.3 5.2 5.2 5.1 5.1 5.0 5.0 5.2 5.2 5.5 5.6
ACMAPQ < 3 4.9 4.8 4.9 5.0 5.2 5.0 5.2 4.9 5.0 5.0 5.0 5.0 5.1 5.1 5.1 5.1 5.2 5.1 5.0 5.0 5.1 5.0 5.1 5.0 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.1 5.1 5.0 5.2 5.1 5.1 5.2 5.1 5.3 5.2 5.1 5.0 5.1 5.0 5.1 5.1 5.2 5.2 5.1 4.4 5.5 5.1 5.1 5.1 5.1 5.3 5.3 5.3 5.4 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.2 5.1 5.3 5.2
ACUnmapped 5.4 5.1 5.0 5.0 5.2 4.9 5.0 4.8 4.9 4.8 4.8 4.8 4.8 4.7 4.8 4.8 4.8 4.7 4.7 4.7 4.8 4.7 4.6 4.5 4.6 4.7 4.7 4.7 4.7 4.7 4.7 4.7 6.3 4.6 4.6 4.6 4.5 4.6 4.5 4.5 6.3 4.5 4.5 4.5 4.5 4.4 4.5 4.4 4.5 4.5 4.5 3.7 3.9 4.5 4.5 4.5 4.5 4.6 4.5 4.6 4.6 4.6 4.6 4.5 4.5 4.6 4.5 4.5 4.5 4.5 4.5 4.5 4.6 4.5
AGMAPQ >= 30 9.0 7.7 7.6 7.8 7.7 7.5 7.2 7.2 7.2 7.3 7.4 7.3 7.3 7.3 7.4 7.4 7.4 7.4 7.4 7.4 7.4 7.4 7.5 7.5 7.5 7.5 7.5 7.6 7.5 7.6 7.5 7.5 7.5 7.5 7.5 7.5 7.6 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 6.6 8.1 7.5 7.6 7.5 7.6 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.6 7.6 7.5 7.6 7.6 7.6 7.5
AGMAPQ >= 20 9.1 7.7 7.5 7.6 7.5 7.3 7.0 7.1 7.1 7.3 7.3 7.1 7.1 7.2 7.2 7.2 7.2 7.4 7.3 7.3 7.4 7.2 7.6 7.5 7.6 7.5 7.4 7.6 7.5 7.7 7.4 7.4 7.6 7.3 7.4 7.5 7.5 7.4 7.4 7.5 7.3 7.3 7.2 7.3 7.3 7.5 7.6 7.4 7.5 7.6 7.5 6.4 8.2 7.4 7.5 7.4 7.4 7.3 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.3 7.4 7.4 7.3 7.5 7.7 7.5 7.5
AGMAPQ >= 10 9.2 7.6 7.3 7.5 7.4 7.2 6.9 7.1 7.2 7.4 7.4 7.1 7.2 7.3 7.3 7.1 7.2 7.6 7.5 7.4 7.5 7.2 7.9 7.5 7.7 7.7 7.5 7.7 7.6 7.7 7.3 7.4 7.6 7.3 7.2 7.5 7.4 7.2 7.3 7.5 7.3 7.5 7.1 7.4 7.2 7.6 7.6 7.4 7.6 7.6 7.4 6.3 8.2 7.5 7.6 7.3 7.3 7.5 7.3 7.4 7.4 7.3 7.3 7.4 7.3 7.4 7.5 7.7 7.7 7.4 7.6 7.9 7.6 7.5
AGMAPQ >= 3 8.5 7.1 6.7 7.0 7.1 6.9 6.9 6.9 7.2 7.5 7.4 7.2 7.3 7.4 7.5 7.3 7.6 7.9 7.5 7.5 7.8 7.4 8.1 7.6 7.3 7.4 7.3 7.4 7.3 7.5 7.2 7.7 7.6 7.3 7.1 7.2 7.1 7.0 7.0 6.9 6.9 6.7 6.4 6.8 6.7 7.1 7.3 7.1 7.4 7.4 7.1 6.3 8.0 7.4 7.5 7.4 7.1 7.3 7.1 7.1 7.3 7.2 7.2 7.4 7.1 7.2 7.2 7.3 7.5 7.3 7.7 7.6 7.4 6.9
AGMAPQ < 3 8.7 7.4 7.2 7.4 7.3 7.2 6.9 6.9 7.0 7.1 7.2 7.1 7.1 7.2 7.2 7.1 7.2 7.3 7.2 7.2 7.3 7.2 7.5 7.3 7.3 7.3 7.2 7.3 7.3 7.3 7.2 7.2 7.3 7.2 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.0 7.2 7.1 7.3 7.3 7.2 7.3 7.3 7.2 6.3 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.1 7.2 7.1 7.2 7.2 7.3 7.3 7.2 7.4 7.4 7.3 7.2
AGUnmapped 7.6 6.5 6.7 6.4 6.4 6.3 6.0 7.7 5.9 7.6 6.1 6.0 6.0 6.0 6.0 6.0 6.0 7.6 6.0 5.9 7.7 6.0 6.1 6.0 6.1 6.2 6.2 6.3 6.3 6.2 7.9 6.2 6.3 6.2 6.2 6.2 6.3 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.1 6.1 6.1 6.0 6.2 6.2 6.4 5.3 5.3 6.1 6.2 6.2 6.3 6.3 6.2 6.3 6.3 6.3 6.4 6.4 6.5 6.4 6.4 6.5 6.4 6.5 6.5 6.5 6.6 6.6
ATMAPQ >= 30 7.9 6.9 7.1 6.7 6.8 6.6 6.8 6.6 6.4 6.5 6.4 6.4 6.4 6.3 6.3 6.3 6.3 6.3 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.1 6.2 6.2 6.1 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 5.2 7.1 6.0 6.1 6.1 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0
ATMAPQ >= 20 7.4 6.5 6.6 6.3 6.2 6.2 6.3 6.1 5.8 5.9 6.1 6.1 6.0 5.9 5.8 5.9 5.8 5.8 5.8 5.8 5.7 5.7 5.7 5.9 5.7 5.8 5.7 5.7 5.6 5.6 5.7 5.7 5.7 5.7 5.7 5.7 5.6 5.7 5.7 5.7 5.7 5.9 5.7 5.7 5.6 5.7 5.6 5.5 5.6 5.7 5.7 4.8 6.8 5.5 5.7 5.7 5.7 5.7 5.5 5.6 5.6 5.5 5.6 5.6 5.5 5.6 5.4 5.5 5.4 5.5 5.6 5.7 5.7 5.7
ATMAPQ >= 10 6.9 6.2 6.3 6.0 6.0 5.9 6.0 5.8 5.4 5.6 5.7 5.8 5.6 5.6 5.5 5.5 5.6 5.5 5.4 5.6 5.4 5.3 5.4 5.6 5.4 5.5 5.3 5.5 5.4 5.3 5.4 5.4 5.5 5.5 5.4 5.4 5.4 5.5 5.5 5.5 5.5 5.6 5.4 5.5 5.4 5.5 5.4 5.3 5.4 5.6 5.5 4.6 6.5 5.3 5.6 5.5 5.5 5.6 5.3 5.4 5.4 5.3 5.4 5.4 5.3 5.3 5.2 5.4 5.2 5.2 5.3 5.4 5.5 5.5
ATMAPQ >= 3 7.5 6.8 6.8 6.5 6.5 6.3 6.4 6.2 5.7 6.0 6.1 6.1 5.9 5.8 5.7 5.7 5.8 5.6 5.5 5.6 5.5 5.4 5.7 5.8 5.6 5.8 5.4 5.7 5.6 5.5 5.6 5.8 6.1 6.0 5.7 5.9 5.9 6.1 6.0 6.0 6.1 6.1 5.8 5.6 5.4 5.6 5.5 5.6 5.7 5.8 5.7 4.8 6.6 5.5 5.6 5.7 5.7 5.9 5.8 5.6 5.6 5.7 5.8 5.9 5.8 5.7 5.6 5.7 5.6 5.7 5.8 6.0 6.1 6.0
ATMAPQ < 3 7.9 7.0 7.2 6.8 6.7 6.8 6.9 6.6 6.3 6.4 6.5 6.5 6.4 6.3 6.3 6.3 6.3 6.3 6.3 6.4 6.3 6.3 6.2 6.4 6.3 6.3 6.2 6.3 6.2 6.2 6.3 6.3 6.3 6.3 6.2 6.3 6.3 6.3 6.3 6.3 6.3 6.4 6.3 6.2 6.3 6.3 6.3 6.2 6.2 6.3 6.3 5.3 6.6 6.2 6.3 6.3 6.3 6.3 6.2 6.1 6.2 6.1 6.2 6.2 6.2 6.2 6.1 6.2 6.1 6.1 6.2 6.2 6.2 6.2
ATUnmapped 9.3 10.1 8.3 7.7 7.6 7.9 8.0 7.6 7.2 7.1 7.6 7.3 7.3 7.0 6.8 7.2 7.1 7.0 6.7 6.5 6.9 7.0 6.8 6.7 8.1 6.9 6.8 6.8 6.5 6.4 6.8 6.9 6.7 6.5 6.3 6.7 6.6 6.6 6.3 6.2 6.6 6.6 8.2 6.3 6.2 6.5 6.6 6.3 6.2 7.8 6.6 5.5 5.6 6.2 6.2 6.6 6.7 6.6 6.3 6.2 6.6 6.6 6.5 6.3 6.3 6.7 6.7 6.6 6.4 6.3 6.7 6.8 6.6 6.4
CAMAPQ >= 30 8.5 6.3 7.1 7.4 7.2 7.5 7.1 7.5 7.6 7.6 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.7 7.6 7.7 7.6 7.7 7.6 7.6 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.7 8.2 6.6 7.8 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.6 7.7
CAMAPQ >= 20 8.4 6.3 7.2 7.4 7.3 7.6 7.1 7.7 7.7 7.8 7.6 7.6 7.7 7.7 7.7 7.7 7.8 7.7 7.7 7.9 7.7 7.8 7.7 7.9 7.7 7.7 7.7 7.8 7.7 7.8 7.8 7.9 7.8 7.6 7.9 7.8 7.8 7.8 7.7 7.8 7.6 7.6 7.8 7.7 7.9 7.9 7.7 7.8 7.8 7.6 7.8 8.3 6.5 7.8 7.7 7.6 7.5 7.5 7.7 7.8 7.6 7.7 7.6 7.6 7.5 7.6 7.7 7.6 7.6 7.6 7.7 7.6 7.6 7.6
CAMAPQ >= 10 8.4 6.2 7.2 7.5 7.3 7.6 7.0 7.8 7.8 7.8 7.6 7.5 7.7 7.7 7.7 7.6 7.7 7.7 7.8 7.9 7.6 7.8 7.7 8.0 7.6 7.8 7.7 8.0 8.0 8.0 8.1 8.1 7.9 7.6 8.1 8.0 7.9 8.0 7.8 7.9 7.6 7.6 7.8 7.6 8.0 7.8 7.7 7.9 7.9 7.6 7.8 8.4 6.7 8.0 7.6 7.9 7.7 7.7 7.9 8.0 7.7 8.0 7.7 7.9 7.6 7.7 7.9 7.8 7.7 7.8 7.9 7.8 7.8 7.7
CAMAPQ >= 3 8.5 6.2 7.4 7.6 7.3 7.7 7.1 8.0 7.8 8.1 7.6 7.6 7.7 7.5 7.5 7.3 7.3 7.2 7.2 7.6 7.4 7.7 7.5 7.5 7.3 7.5 7.5 7.9 7.9 8.0 8.2 7.9 7.9 7.5 7.9 8.0 8.1 7.8 7.5 7.8 7.4 7.3 7.5 7.3 7.8 7.7 7.4 7.6 7.6 7.4 7.6 8.1 6.3 7.6 7.2 7.3 7.3 7.2 7.3 7.5 7.4 7.6 7.2 7.2 7.1 7.5 7.5 7.6 7.5 7.6 7.6 7.5 7.4 7.7
CAMAPQ < 3 8.5 6.4 7.2 7.5 7.4 7.7 7.1 7.7 7.8 7.8 7.6 7.6 7.7 7.6 7.7 7.6 7.6 7.6 7.7 7.7 7.6 7.7 7.6 7.8 7.6 7.7 7.8 7.8 7.8 7.8 7.9 7.9 7.8 7.7 7.9 7.9 7.8 7.7 7.8 7.8 7.7 7.7 7.7 7.7 7.8 7.8 7.7 7.8 7.8 7.7 7.7 7.7 6.6 7.8 7.7 7.7 7.7 7.6 7.8 7.9 7.7 7.8 7.7 7.7 7.7 7.7 7.8 7.7 7.7 7.7 7.7 7.7 7.7 7.7
CAUnmapped 8.0 6.2 6.7 7.0 7.1 7.3 6.7 6.9 7.0 7.3 7.0 6.8 6.6 6.7 6.8 6.8 8.3 6.6 6.7 8.6 6.8 6.6 6.5 6.6 6.8 6.7 6.6 6.4 6.6 6.8 6.7 6.6 6.4 6.5 6.7 6.6 6.5 6.3 6.4 6.6 6.5 8.1 6.3 6.5 6.6 6.6 6.3 6.4 6.5 6.9 6.7 5.5 5.3 6.6 6.8 6.7 6.4 6.3 6.5 6.8 6.7 6.5 6.4 6.5 6.8 6.6 6.5 6.3 6.5 6.6 6.6 6.3 6.3 6.5
CCMAPQ >= 30 5.7 5.2 5.5 5.3 5.6 5.9 6.0 6.2 6.0 6.0 6.1 6.2 6.2 6.4 6.3 6.4 6.4 6.5 6.5 6.5 6.5 6.5 6.5 6.4 6.4 6.4 6.5 6.5 6.4 6.4 6.4 6.4 6.4 6.5 6.4 6.4 6.4 6.4 6.4 6.4 6.4 6.5 6.5 6.5 6.5 6.5 6.4 6.5 6.5 6.5 6.5 5.5 5.5 6.5 6.5 6.5 6.5 6.5 6.6 6.6 6.6 6.6 6.7 6.6 6.6 6.7 6.6 6.7 6.6 6.6 6.6 6.6 6.6 6.6
CCMAPQ >= 20 5.6 5.3 5.5 5.3 5.6 6.0 6.1 6.3 6.1 6.2 6.2 6.2 6.1 6.5 6.4 6.6 6.7 6.8 6.8 6.7 6.7 6.8 6.8 6.6 6.7 6.7 6.9 6.8 6.8 6.7 6.6 6.6 6.7 6.7 6.8 6.6 6.7 6.6 6.7 6.6 6.8 6.8 6.8 6.9 6.9 6.9 6.7 6.8 6.8 6.8 6.8 5.6 5.7 6.7 6.7 6.7 6.7 6.7 6.9 7.1 7.0 7.0 7.1 7.1 7.1 7.3 7.2 7.3 7.2 7.1 7.1 7.2 7.3 7.4
CCMAPQ >= 10 5.9 5.5 5.8 5.5 5.9 6.4 6.5 6.7 6.6 6.6 6.5 6.4 6.3 7.0 6.7 7.0 7.2 7.5 7.4 7.2 7.2 7.5 7.4 7.0 7.3 7.4 7.7 7.6 7.3 7.4 7.3 7.2 7.3 7.5 7.5 7.3 7.5 7.2 7.4 7.3 7.5 7.5 7.6 7.7 7.9 7.9 7.6 7.6 7.7 7.6 7.6 6.3 6.4 7.5 7.5 7.5 7.5 7.3 7.7 7.8 7.6 7.7 7.9 7.9 7.9 8.0 8.0 8.0 7.9 7.8 7.8 8.0 8.1 8.3
CCMAPQ >= 3 5.8 5.4 5.7 5.6 5.9 6.3 6.4 7.0 6.8 6.7 6.7 6.5 6.4 6.9 6.6 7.1 7.3 7.3 7.4 7.3 7.1 7.2 7.0 6.8 7.1 7.3 7.3 7.2 7.1 7.0 6.9 7.0 7.0 7.3 7.6 7.4 7.3 7.1 7.4 7.2 7.6 7.8 7.9 8.3 8.5 8.5 8.2 8.3 8.3 8.3 8.1 6.6 6.6 7.6 7.5 7.5 7.4 7.3 7.6 7.5 7.1 7.2 7.1 7.2 7.3 7.4 7.4 7.4 7.3 7.2 7.5 7.7 8.0 8.2
CCMAPQ < 3 5.7 5.3 5.6 5.4 5.7 6.0 6.1 6.3 6.2 6.3 6.2 6.2 6.2 6.5 6.4 6.5 6.6 6.7 6.7 6.6 6.6 6.7 6.6 6.5 6.6 6.6 6.7 6.7 6.6 6.7 6.6 6.6 6.6 6.7 6.7 6.6 6.6 6.5 6.6 6.6 6.7 6.8 6.8 6.8 6.9 6.9 6.8 6.8 6.8 6.8 6.8 5.7 5.7 6.7 6.7 6.7 6.6 6.6 6.8 6.8 6.7 6.8 6.8 6.9 6.9 6.9 6.9 6.9 6.8 6.8 6.8 6.9 7.0 7.1
CCUnmapped 4.8 4.4 4.8 4.8 5.1 4.9 4.9 5.0 5.1 5.0 4.8 4.7 4.8 5.1 5.0 4.9 4.8 5.0 5.2 5.1 5.0 4.9 4.9 5.1 5.0 5.0 4.9 6.7 5.2 5.2 5.1 4.9 5.1 7.1 5.4 5.4 5.3 5.5 5.9 5.9 5.8 5.8 5.8 6.1 6.1 6.1 6.2 6.5 6.7 6.6 6.6 5.3 6.7 6.7 6.6 6.5 6.2 6.4 6.6 6.6 6.5 6.4 6.5 6.7 6.6 6.4 6.3 6.4 6.6 6.5 6.3 6.2 6.4 6.6
CGMAPQ >= 30 1.2 0.9 1.2 1.3 1.3 1.4 1.2 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.5 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.5 1.4 1.4 1.4 1.4 1.4 1.4 1.3 1.4 1.4 1.4 1.6 1.5 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.5 1.5
CGMAPQ >= 20 1.7 1.4 1.7 2.0 2.0 2.1 1.8 2.2 2.2 2.0 2.0 2.1 2.1 2.0 2.0 2.1 2.1 2.0 2.0 2.1 2.1 2.1 2.1 2.0 2.0 2.0 2.0 2.0 2.0 2.1 2.1 2.1 2.0 2.0 2.1 2.1 2.1 2.1 2.1 2.2 2.1 2.1 2.1 2.2 2.1 2.2 2.1 2.1 2.1 2.1 2.1 2.0 1.9 2.2 2.1 2.1 2.3 2.3 2.1 2.1 2.1 2.2 2.1 2.1 2.1 2.0 2.1 2.1 2.2 2.2 2.1 2.1 2.2 2.2
CGMAPQ >= 10 2.0 1.6 1.9 2.3 2.3 2.5 2.1 2.7 2.5 2.2 2.3 2.4 2.4 2.4 2.4 2.5 2.4 2.3 2.3 2.5 2.4 2.5 2.4 2.4 2.3 2.3 2.4 2.3 2.4 2.5 2.4 2.5 2.4 2.3 2.4 2.4 2.5 2.5 2.4 2.6 2.3 2.4 2.5 2.5 2.5 2.5 2.5 2.5 2.4 2.5 2.4 2.3 2.2 2.6 2.5 2.5 2.5 2.5 2.4 2.5 2.4 2.4 2.4 2.4 2.4 2.3 2.4 2.4 2.5 2.5 2.4 2.4 2.3 2.4
CGMAPQ >= 3 1.9 1.6 1.9 2.1 2.3 2.4 2.1 2.7 2.3 2.0 2.3 2.4 2.3 2.4 2.4 2.5 2.4 2.4 2.4 2.6 2.6 2.8 2.6 2.6 2.4 2.4 2.5 2.4 2.5 2.7 2.5 2.5 2.4 2.3 2.5 2.5 2.6 2.6 2.5 2.6 2.3 2.4 2.5 2.6 2.6 2.5 2.5 2.5 2.4 2.5 2.5 2.4 2.3 2.8 2.5 2.6 2.5 2.4 2.5 2.5 2.5 2.4 2.3 2.2 2.2 2.2 2.4 2.4 2.5 2.4 2.4 2.3 2.2 2.4
CGMAPQ < 3 1.7 1.3 1.6 1.9 1.9 2.0 1.7 2.1 2.0 1.9 1.9 2.0 2.0 2.0 2.0 2.0 1.9 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 1.9 2.0 2.0 2.1 2.0 2.0 2.1 2.0 2.0 2.0 2.0 2.0 2.1 2.0 2.0 2.0 2.0 2.0 1.9 1.8 2.1 2.0 2.0 2.1 2.1 2.0 2.0 2.0 2.0 2.0 2.0 2.0 1.9 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.1
CGUnmapped 1.7 1.3 1.7 3.5 1.9 2.1 1.7 2.0 2.1 2.0 1.9 3.6 1.9 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.1 2.0 2.1 3.8 2.2 2.1 2.1 2.1 2.2 3.9 2.2 2.2 2.2 2.3 2.3 2.2 2.2 2.2 2.2 2.2 2.3 3.9 2.3 2.4 2.4 2.3 2.1 2.1 4.1 2.5 2.5 2.6 2.6 2.5 2.6 2.5 2.5 2.5 2.6 2.6 2.6 2.7 2.7 2.8 2.8 2.8 2.8 3.0 3.1
CTMAPQ >= 30 8.2 6.7 7.0 7.2 6.9 7.3 7.3 7.6 7.4 7.4 7.4 7.6 7.5 7.4 7.5 7.5 7.4 7.5 7.5 7.5 7.5 7.6 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.5 7.6 7.6 7.6 7.5 7.5 7.5 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.5 7.6 7.6 7.6 6.5 6.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.5 7.6
CTMAPQ >= 20 8.1 6.7 7.0 7.1 6.8 7.3 7.3 7.5 7.1 7.3 7.2 7.7 7.6 7.3 7.6 7.6 7.4 7.6 7.7 7.5 7.6 7.6 7.5 7.5 7.5 7.5 7.5 7.5 7.4 7.4 7.3 7.3 7.6 7.4 7.5 7.4 7.4 7.5 7.4 7.4 7.5 7.8 7.6 7.7 7.5 7.6 7.7 7.5 7.5 7.7 7.6 6.4 6.4 7.3 7.5 7.4 7.6 7.5 7.4 7.5 7.6 7.5 7.4 7.5 7.5 7.5 7.5 7.4 7.4 7.2 7.2 7.1 7.1 7.1
CTMAPQ >= 10 8.1 6.8 7.1 7.2 6.8 7.4 7.3 7.7 7.1 7.3 7.3 7.9 7.7 7.5 7.9 7.7 7.5 7.7 7.7 7.5 7.7 7.7 7.5 7.4 7.3 7.4 7.5 7.5 7.4 7.4 7.4 7.3 7.9 7.5 7.8 7.4 7.5 7.6 7.5 7.5 7.7 8.0 7.8 7.9 7.5 7.7 8.0 7.6 7.6 8.0 8.0 6.7 6.8 7.4 7.7 7.7 8.0 7.9 7.7 7.9 8.0 7.9 7.8 7.7 7.9 7.8 7.7 7.7 7.7 7.2 7.2 7.2 7.2 7.1
CTMAPQ >= 3 8.0 6.6 7.0 7.2 7.0 7.2 6.9 7.1 6.8 7.1 7.0 7.7 7.6 7.3 7.6 7.3 7.2 7.6 7.6 7.4 7.5 7.3 7.2 7.1 7.4 7.3 7.3 7.2 6.9 6.9 6.8 6.7 7.1 6.8 7.4 7.0 7.2 7.3 7.3 7.6 7.3 8.1 8.0 7.9 7.6 7.5 7.6 7.4 7.4 7.8 7.8 6.8 6.8 7.4 7.7 7.5 7.9 8.0 7.9 7.9 7.8 7.6 7.7 7.6 7.7 7.6 7.5 7.5 7.4 6.9 6.6 6.7 6.8 6.9
CTMAPQ < 3 7.9 6.4 6.8 7.0 6.7 7.1 7.1 7.3 7.0 7.1 7.1 7.4 7.3 7.2 7.4 7.3 7.2 7.3 7.3 7.3 7.3 7.3 7.2 7.1 7.2 7.3 7.2 7.2 7.2 7.1 7.2 7.1 7.4 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.4 7.4 7.4 7.3 7.3 7.4 7.3 7.3 7.4 7.4 6.3 6.4 7.2 7.4 7.3 7.4 7.4 7.4 7.5 7.5 7.4 7.4 7.4 7.4 7.4 7.3 7.3 7.3 7.1 7.1 7.1 7.1 7.2
CTUnmapped 7.2 6.1 6.3 6.4 6.2 6.5 6.5 6.7 6.4 6.4 6.3 6.3 6.2 6.1 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0 5.9 5.8 5.7 5.7 5.7 5.7 5.7 5.6 5.7 5.6 5.7 5.6 5.7 5.7 5.7 5.7 7.4 5.8 5.8 5.8 5.9 5.8 7.4 5.7 5.7 5.7 5.7 5.7 5.7 4.7 4.8 5.6 5.7 5.6 7.3 5.6 5.7 7.2 5.7 5.6 7.3 5.6 5.6 5.6 5.6 5.5 5.5 5.4 5.6 5.5 5.5 5.5
GAMAPQ >= 30 5.9 6.5 6.3 6.3 6.3 6.2 6.1 5.6 5.9 5.9 5.9 5.9 5.8 5.8 5.8 5.9 5.9 5.9 5.9 5.9 5.9 6.0 5.9 6.0 6.0 5.9 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.0 6.1 6.1 6.0 6.0 6.0 6.0 6.1 6.1 6.1 6.1 6.1 6.0 6.9 5.3 6.1 6.1 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.1 6.0 6.1 6.0 6.1 6.0 6.0 6.1 6.1 6.1 6.1 6.1
GAMAPQ >= 20 6.2 6.8 6.4 6.7 6.5 6.5 6.3 5.8 6.2 6.3 6.1 6.1 6.0 6.0 6.0 6.0 6.1 6.1 6.2 6.1 6.1 6.3 6.2 6.3 6.3 6.1 6.5 6.3 6.4 6.3 6.3 6.5 6.4 6.3 6.4 6.3 6.3 6.4 6.4 6.5 6.5 6.2 6.3 6.3 6.4 6.4 6.4 6.5 6.6 6.5 6.3 7.3 5.5 6.5 6.5 6.5 6.5 6.4 6.5 6.3 6.4 6.3 6.4 6.3 6.3 6.2 6.3 6.2 6.2 6.3 6.5 6.5 6.6 6.5
GAMAPQ >= 10 6.0 6.6 6.2 6.5 6.1 6.3 6.3 5.7 6.3 6.2 6.0 6.0 5.8 5.9 5.9 6.1 6.2 6.1 6.2 6.1 6.0 6.4 6.4 6.4 6.4 6.1 6.6 6.3 6.4 6.2 6.3 6.6 6.4 6.2 6.6 6.4 6.2 6.5 6.4 6.7 6.7 6.2 6.4 6.3 6.5 6.6 6.4 6.6 6.8 6.6 6.3 7.4 5.6 6.7 6.7 6.7 6.8 6.5 6.7 6.5 6.5 6.4 6.7 6.3 6.5 6.2 6.5 6.2 6.1 6.5 6.7 6.7 6.8 6.4
GAMAPQ >= 3 5.7 6.0 5.7 5.8 5.4 5.9 5.8 5.5 5.9 5.8 5.7 5.7 5.7 5.8 5.8 6.1 6.4 6.2 6.3 6.4 6.5 6.6 6.5 6.6 6.6 6.2 6.8 6.3 6.5 6.5 6.6 6.9 6.7 6.3 6.5 6.3 6.3 6.5 6.3 6.7 6.4 5.9 6.1 6.0 6.3 6.4 6.4 6.6 6.7 6.4 6.2 7.1 5.5 6.5 6.7 6.5 6.8 6.5 6.5 6.3 6.4 6.4 6.8 6.2 6.3 5.9 6.2 6.1 6.2 6.8 6.8 7.1 6.6 6.4
GAMAPQ < 3 6.4 6.9 6.5 6.6 6.5 6.6 6.4 5.9 6.2 6.3 6.2 6.2 6.1 6.2 6.2 6.3 6.4 6.3 6.4 6.4 6.3 6.5 6.5 6.5 6.5 6.3 6.6 6.4 6.5 6.4 6.4 6.6 6.5 6.4 6.5 6.5 6.4 6.5 6.5 6.6 6.6 6.4 6.5 6.5 6.5 6.6 6.5 6.5 6.6 6.5 6.4 6.7 5.7 6.6 6.6 6.5 6.6 6.5 6.5 6.4 6.5 6.5 6.5 6.4 6.5 6.4 6.5 6.4 6.4 6.5 6.6 6.6 6.5 6.5
GAUnmapped 8.5 6.9 6.1 6.6 6.6 8.2 6.3 5.6 7.7 6.3 6.1 6.2 5.9 6.1 6.2 6.2 6.1 5.9 6.0 6.2 6.2 6.2 7.6 6.3 6.3 6.4 6.4 6.3 6.4 8.3 6.6 8.1 6.1 6.4 6.5 6.4 6.3 6.1 6.2 6.4 6.3 6.2 6.0 6.1 6.3 6.3 6.1 6.0 6.1 6.4 6.3 5.3 5.2 6.3 6.4 6.4 6.4 6.2 6.3 6.5 6.6 6.4 6.2 6.5 6.6 8.3 6.7 6.5 6.7 6.9 6.9 6.8 6.7 7.0
GCMAPQ >= 30 4.4 4.5 4.8 4.9 5.1 4.9 5.3 5.0 5.1 5.2 5.2 5.2 5.3 5.3 5.3 5.3 5.4 5.3 5.3 5.4 5.4 5.4 5.4 5.4 5.3 5.4 5.4 5.4 5.4 5.4 5.5 5.5 5.4 5.4 5.4 5.4 5.3 5.5 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.5 5.4 5.4 5.4 4.7 4.8 5.4 5.5 5.4 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.4 5.5 5.4 5.4 5.4 5.4 5.5 5.5 5.4 5.5 5.4
GCMAPQ >= 20 4.8 4.8 5.2 5.3 5.6 5.3 5.7 5.3 5.3 5.5 5.6 5.6 5.6 5.6 5.8 5.7 5.7 5.7 5.6 5.8 5.8 5.8 5.8 5.9 5.6 5.8 5.7 5.7 5.8 5.8 6.0 5.9 5.6 5.7 5.7 5.8 5.8 5.9 5.8 5.7 5.8 5.8 5.7 5.8 5.7 5.8 5.7 5.7 5.7 5.7 5.7 4.9 5.0 5.6 5.7 5.7 5.7 5.7 5.8 5.7 5.7 5.7 5.7 5.5 5.7 5.6 5.7 5.7 5.6 5.7 5.7 5.6 5.6 5.5
GCMAPQ >= 10 5.4 5.4 5.8 5.7 6.0 5.6 6.4 5.6 5.7 5.9 6.0 6.2 6.1 6.1 6.2 6.0 6.2 6.0 6.0 6.3 6.4 6.2 6.1 6.3 5.9 6.2 6.1 6.1 6.4 6.4 6.7 6.6 6.0 6.3 6.1 6.2 6.3 6.4 6.3 6.1 6.2 6.3 6.2 6.5 6.3 6.4 6.2 6.2 6.1 6.1 6.0 5.4 5.3 6.0 6.3 6.2 6.1 6.1 6.2 6.1 6.3 6.3 6.3 6.0 6.1 6.1 6.3 6.3 6.2 6.4 6.4 6.1 6.2 6.1
GCMAPQ >= 3 5.3 5.2 5.7 5.4 5.8 5.5 6.4 5.7 5.6 5.7 5.7 5.9 5.7 5.8 5.8 5.7 5.6 5.6 5.8 5.8 5.9 6.0 5.9 6.1 5.7 5.7 5.6 5.5 5.8 5.8 6.1 5.9 5.6 6.0 5.9 5.9 6.0 6.1 6.0 5.9 5.8 6.1 5.8 6.0 5.7 5.8 5.6 5.7 5.7 5.8 5.6 5.0 5.1 5.7 6.0 6.0 5.8 5.7 5.7 5.7 5.9 5.9 5.9 5.7 6.0 6.1 6.3 6.5 6.2 6.3 6.2 6.1 6.0 6.0
GCMAPQ < 3 4.6 4.6 4.9 5.0 5.2 4.9 5.4 5.0 5.1 5.2 5.2 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.4 5.4 5.3 5.4 5.3 5.4 5.3 5.3 5.4 5.4 5.5 5.5 5.3 5.4 5.4 5.3 5.4 5.5 5.4 5.3 5.4 5.5 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.3 4.6 4.7 5.3 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.5 5.3 5.4 5.4 5.5 5.5 5.4 5.5 5.5 5.4 5.4 5.4
GCUnmapped 3.4 3.3 3.6 3.8 4.0 3.8 4.0 3.8 3.9 3.8 5.5 3.8 3.9 3.8 3.9 3.9 3.8 3.9 5.6 3.9 3.9 3.8 3.8 3.8 3.8 3.9 5.5 3.9 3.8 3.9 3.8 3.8 3.8 3.8 3.8 3.8 3.9 5.6 3.9 3.8 3.9 3.9 3.9 3.9 3.9 3.9 4.0 4.0 4.1 4.1 4.1 4.9 3.6 4.2 4.2 4.1 4.2 4.2 4.2 4.3 4.3 5.9 4.3 4.2 4.2 4.3 4.3 4.3 4.3 4.3 4.2 4.3 4.3 4.4
GGMAPQ >= 30 6.6 6.5 6.6 6.1 6.2 6.4 6.1 5.8 6.0 6.1 6.1 6.1 6.1 6.1 6.2 6.3 6.4 6.4 6.4 6.5 6.5 6.4 6.4 6.4 6.4 6.5 6.5 6.5 6.5 6.5 6.6 6.5 6.5 6.5 6.5 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.5 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.6 5.7 5.7 6.6 6.6 6.6 6.5 6.6 6.6 6.6 6.7 6.6 6.6 6.6 6.6 6.7 6.6 6.7 6.7 6.8 6.7 6.8 6.7 6.7
GGMAPQ >= 20 7.3 7.1 7.2 6.6 6.7 7.1 6.5 6.2 6.7 6.9 6.7 6.4 6.4 6.5 6.7 6.6 6.7 6.8 6.9 6.9 7.0 6.8 6.8 7.1 7.0 7.2 7.0 7.1 7.1 7.2 7.4 7.1 7.1 7.3 7.1 7.2 7.4 7.2 7.2 7.4 7.4 7.3 7.2 7.0 7.2 7.1 7.3 7.3 7.2 7.1 7.3 6.1 6.0 7.1 7.2 7.1 6.9 7.0 7.1 7.1 7.2 7.0 7.0 7.1 7.1 7.2 7.1 7.2 7.4 7.6 7.3 7.4 7.4 7.3
GGMAPQ >= 10 8.4 8.1 7.9 7.1 7.4 8.0 7.2 6.7 7.5 7.7 7.5 6.9 6.7 7.0 7.4 7.2 7.2 7.4 7.7 7.7 7.8 7.4 7.5 7.9 7.8 8.0 7.6 7.9 7.9 8.1 8.2 7.7 7.8 8.1 7.6 7.6 8.0 7.8 7.7 7.9 7.8 7.6 7.6 7.3 7.6 7.3 7.7 7.6 7.4 7.3 7.6 6.4 6.2 7.2 7.3 7.3 7.0 7.0 7.2 7.2 7.2 6.9 6.7 6.8 6.9 7.1 6.9 7.0 7.3 7.5 7.2 7.2 7.0 7.1
GGMAPQ >= 3 8.4 7.9 7.5 6.7 6.9 7.4 6.9 6.2 6.8 7.2 6.8 6.3 6.5 6.7 7.3 7.2 7.2 7.6 8.1 7.9 7.9 7.9 8.2 8.4 8.3 8.4 8.1 8.4 8.4 8.5 8.6 8.1 8.2 8.0 7.3 7.3 7.7 7.4 7.6 7.5 7.4 7.3 7.1 6.8 7.2 7.2 7.5 7.3 7.2 7.1 7.3 6.2 6.0 7.3 7.5 7.5 7.3 7.2 7.3 7.3 7.3 7.1 6.8 7.0 7.0 7.1 7.0 6.9 7.1 7.4 7.0 7.0 6.8 6.9
GGMAPQ < 3 7.3 6.9 6.9 6.4 6.5 6.8 6.3 6.0 6.4 6.5 6.4 6.2 6.2 6.4 6.5 6.5 6.5 6.6 6.8 6.8 6.8 6.7 6.7 6.9 6.8 6.9 6.8 6.9 6.9 7.0 7.1 6.8 6.9 6.9 6.7 6.8 6.9 6.8 6.8 6.8 6.9 6.8 6.7 6.6 6.7 6.6 6.8 6.7 6.7 6.7 6.8 5.8 5.7 6.7 6.7 6.7 6.6 6.6 6.7 6.7 6.7 6.5 6.5 6.6 6.6 6.7 6.6 6.6 6.7 6.8 6.7 6.7 6.7 6.7
GGUnmapped 5.6 5.1 5.2 5.1 6.8 5.1 4.8 4.7 5.1 5.2 5.1 4.9 6.7 5.2 5.2 5.2 5.1 5.3 5.4 5.4 5.4 6.9 5.5 5.7 5.8 5.8 5.8 6.0 6.3 6.5 6.7 6.6 6.9 7.1 7.1 8.8 8.7 7.2 7.3 7.3 7.3 7.1 7.0 7.1 7.1 7.1 7.0 7.2 7.2 7.3 7.4 6.2 6.3 7.8 8.0 8.2 8.1 8.5 8.9 9.1 9.1 9.0 9.3 9.5 9.7 9.8 9.6 9.8 9.9 9.9 9.8 9.6 9.6 9.6
GTMAPQ >= 30 6.0 5.2 5.1 5.4 5.3 5.2 5.5 5.3 5.2 5.2 5.2 5.2 5.1 5.2 5.2 5.2 5.3 5.3 5.2 5.3 5.3 5.3 5.2 5.2 5.3 5.3 5.2 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.2 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 4.4 4.6 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.2 5.1 5.2 5.1 5.1 5.2 5.1 5.2 5.2 5.2 5.2 5.2 5.2
GTMAPQ >= 20 6.3 5.5 5.3 5.7 5.5 5.4 5.7 5.6 5.4 5.5 5.4 5.5 5.3 5.3 5.3 5.3 5.4 5.4 5.2 5.3 5.4 5.4 5.3 5.2 5.5 5.4 5.4 5.3 5.4 5.3 5.5 5.4 5.4 5.4 5.3 5.3 5.3 5.4 5.2 5.1 5.3 5.3 5.2 5.2 5.1 5.2 5.1 5.2 5.1 5.2 5.1 4.4 4.6 5.1 5.2 5.1 5.2 5.1 5.0 4.9 4.9 5.0 4.9 5.0 4.9 4.9 4.9 4.9 5.0 5.0 5.1 5.0 5.1 5.1
GTMAPQ >= 10 6.4 5.7 5.4 5.9 5.5 5.4 5.8 5.7 5.5 5.7 5.5 5.7 5.4 5.5 5.4 5.5 5.4 5.4 5.2 5.4 5.5 5.4 5.3 5.3 5.5 5.5 5.4 5.3 5.3 5.1 5.4 5.2 5.3 5.3 5.3 5.2 5.1 5.3 5.1 5.0 5.3 5.1 5.2 5.2 5.0 5.1 5.1 5.1 5.0 5.1 5.0 4.3 4.5 5.1 5.1 5.0 5.0 4.8 4.7 4.7 4.6 4.8 4.7 4.9 4.8 4.9 4.8 4.9 5.0 5.1 4.9 4.8 4.9 4.9
GTMAPQ >= 3 6.6 5.8 5.6 5.9 5.4 5.4 5.7 5.7 5.3 5.4 5.4 5.6 5.3 5.5 5.4 5.4 5.4 5.3 5.1 5.4 5.2 5.3 5.2 5.3 5.5 5.4 5.4 5.4 5.2 5.3 5.4 5.3 5.5 5.4 5.4 5.2 5.0 5.3 5.1 5.1 5.3 5.3 5.4 5.3 5.1 5.2 5.2 5.2 5.1 5.2 5.0 4.3 4.6 5.1 5.1 5.0 5.2 4.8 4.7 4.8 4.6 5.0 4.9 5.1 5.1 5.0 4.9 5.0 5.0 5.2 4.9 4.8 5.0 4.7
GTMAPQ < 3 6.2 5.3 5.2 5.5 5.3 5.2 5.5 5.4 5.2 5.3 5.2 5.3 5.2 5.3 5.2 5.3 5.3 5.3 5.2 5.3 5.3 5.3 5.2 5.2 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.3 5.3 5.2 5.1 5.3 5.2 5.1 5.2 5.2 5.2 5.2 5.1 5.1 5.2 5.1 5.1 5.1 5.1 4.4 4.5 5.1 5.1 5.0 5.1 5.0 4.9 5.0 4.9 5.0 4.9 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.1 5.0 5.0 5.0
GTUnmapped 6.1 5.0 4.8 5.1 4.9 4.9 5.1 4.9 4.8 4.8 4.8 4.8 4.7 6.4 4.8 4.8 4.8 4.8 4.8 4.8 4.8 4.7 4.7 4.7 4.7 4.7 4.8 4.8 4.8 4.7 4.8 4.8 4.9 4.9 4.8 4.8 4.8 5.0 4.9 4.8 5.0 4.8 5.0 4.9 4.9 4.8 4.9 6.5 4.9 4.8 4.8 4.0 4.2 4.7 6.4 4.7 4.8 4.8 4.7 4.6 4.7 4.7 4.6 4.5 4.6 4.6 4.6 4.5 4.5 4.5 4.6 4.6 4.5 4.6
TAMAPQ >= 30 4.8 6.2 5.9 6.1 5.8 5.5 5.5 5.5 5.5 5.4 5.4 5.3 5.4 5.4 5.4 5.4 5.3 5.3 5.3 5.3 5.2 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 6.3 4.3 5.1 5.0 5.0 5.1 5.1 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0
TAMAPQ >= 20 4.1 5.2 4.9 5.1 4.8 4.6 4.5 4.5 4.5 4.4 4.4 4.4 4.5 4.5 4.5 4.5 4.4 4.4 4.4 4.4 4.3 4.6 4.4 4.3 4.3 4.4 4.2 4.2 4.2 4.2 4.3 4.3 4.1 4.2 4.2 4.2 4.2 4.1 4.2 4.2 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.2 4.1 4.1 5.5 3.5 4.2 4.0 4.1 4.2 4.2 4.1 4.1 4.1 4.1 4.1 4.0 4.0 4.1 4.1 4.1 4.1 4.2 4.2 4.1 4.1 4.1
TAMAPQ >= 10 3.7 4.8 4.5 4.7 4.5 4.4 4.1 4.1 4.1 4.1 4.1 4.1 4.2 4.2 4.3 4.2 3.9 4.1 3.9 4.0 3.9 4.2 4.0 3.9 4.0 4.0 3.7 3.7 3.7 3.6 3.7 3.8 3.6 3.7 3.6 3.7 3.6 3.5 3.6 3.7 3.7 3.6 3.6 3.6 3.7 3.7 3.6 3.8 3.7 3.7 3.9 5.0 3.2 3.7 3.6 3.6 3.8 3.9 3.8 3.9 3.9 3.8 3.9 3.8 3.8 3.9 3.9 3.9 3.8 4.0 3.9 3.8 3.8 3.7
TAMAPQ >= 3 4.1 5.3 5.0 5.4 5.1 5.1 4.7 4.8 4.7 4.8 4.7 4.7 4.8 5.1 4.9 4.9 4.4 4.5 4.3 4.5 4.2 4.5 4.4 4.2 4.2 4.2 3.9 3.9 4.0 3.8 4.1 4.1 3.9 3.9 3.9 4.0 3.9 3.7 3.9 4.1 4.1 3.9 3.9 4.0 4.1 4.0 3.8 4.0 4.1 4.1 4.4 5.4 3.6 4.1 4.0 4.1 4.2 4.4 4.4 4.6 4.7 4.5 4.5 4.5 4.5 4.5 4.6 4.6 4.3 4.6 4.4 4.4 4.3 4.2
TAMAPQ < 3 4.1 5.3 5.0 5.3 5.0 4.8 4.7 4.7 4.7 4.7 4.6 4.6 4.6 4.7 4.7 4.7 4.6 4.5 4.5 4.5 4.5 4.6 4.6 4.5 4.4 4.5 4.4 4.4 4.4 4.3 4.4 4.4 4.3 4.3 4.3 4.4 4.3 4.3 4.4 4.4 4.4 4.3 4.3 4.4 4.4 4.4 4.3 4.4 4.4 4.4 4.4 5.0 3.8 4.4 4.3 4.3 4.4 4.5 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.4 4.5 4.4 4.4 4.3 4.3
TAUnmapped 4.6 6.1 5.7 5.9 5.7 5.3 5.3 5.3 5.2 5.1 5.0 5.1 4.9 4.9 4.9 4.9 4.8 4.7 4.8 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.6 4.5 4.6 4.5 4.5 4.5 4.4 4.4 4.4 4.3 4.4 4.3 4.3 6.0 4.3 4.3 4.3 4.3 4.3 4.3 4.2 4.2 5.9 4.3 4.2 3.7 3.5 4.3 4.3 4.2 4.4 4.4 4.3 4.3 4.2 4.3 4.3 4.4 4.3 4.3 4.3 4.3 4.3 4.2 4.2 4.2 4.2 4.1
TCMAPQ >= 30 3.9 6.1 5.8 5.7 6.1 5.8 6.2 6.2 6.2 6.1 6.2 6.1 6.2 6.1 6.1 6.0 6.0 6.0 6.1 6.0 6.1 6.0 6.1 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.1 6.1 6.1 6.1 6.0 6.1 6.1 6.1 6.1 6.1 5.2 5.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1
TCMAPQ >= 20 4.0 6.3 6.2 6.0 6.5 6.0 6.7 6.6 6.6 6.3 6.6 6.5 6.7 6.5 6.6 6.4 6.5 6.5 6.6 6.5 6.5 6.3 6.3 6.4 6.5 6.4 6.5 6.4 6.4 6.2 6.1 6.3 6.2 6.5 6.4 6.5 6.3 6.3 6.4 6.3 6.4 6.5 6.7 6.7 6.7 6.4 6.6 6.6 6.5 6.5 6.5 5.6 5.5 6.5 6.3 6.4 6.4 6.5 6.5 6.2 6.4 6.3 6.2 6.3 6.4 6.4 6.4 6.4 6.2 6.2 6.2 6.3 6.3 6.3
TCMAPQ >= 10 4.0 6.5 6.4 6.3 6.7 5.9 6.9 6.7 6.8 6.3 6.8 6.6 7.0 6.6 6.8 6.6 6.7 6.7 6.8 6.6 6.6 6.3 6.4 6.4 6.7 6.5 6.7 6.5 6.6 6.4 6.1 6.4 6.3 6.9 6.5 6.7 6.5 6.4 6.5 6.5 6.6 6.7 7.0 6.8 6.9 6.5 6.8 6.9 6.7 6.8 6.8 6.0 5.9 6.8 6.6 6.8 6.8 6.9 6.9 6.4 6.6 6.4 6.4 6.4 6.5 6.7 6.6 6.3 6.1 6.1 6.0 6.1 6.1 6.1
TCMAPQ >= 3 4.0 6.7 6.5 6.5 6.8 6.0 6.8 6.4 6.4 6.2 6.7 6.6 6.9 6.3 6.4 6.4 6.5 6.7 6.7 6.6 6.7 6.1 6.0 6.4 6.6 6.6 6.9 6.5 6.6 6.2 5.9 6.3 6.2 6.9 6.4 6.8 6.5 6.4 6.6 6.3 6.7 6.6 7.3 7.2 7.0 6.6 6.9 6.8 6.8 6.9 6.9 6.0 5.8 6.7 6.5 6.7 6.7 6.9 6.8 6.4 6.3 5.9 5.9 6.1 6.2 6.3 6.0 5.7 5.5 5.6 5.4 5.4 5.7 5.8
TCMAPQ < 3 4.1 6.5 6.4 6.3 6.6 6.1 6.8 6.8 6.8 6.5 6.6 6.6 6.8 6.5 6.6 6.5 6.6 6.6 6.6 6.6 6.6 6.4 6.4 6.4 6.6 6.5 6.6 6.5 6.6 6.4 6.3 6.5 6.4 6.7 6.5 6.6 6.5 6.5 6.5 6.5 6.5 6.6 6.7 6.7 6.6 6.5 6.7 6.7 6.6 6.6 6.7 5.7 5.7 6.6 6.5 6.6 6.6 6.6 6.7 6.5 6.5 6.4 6.4 6.5 6.5 6.5 6.4 6.4 6.3 6.3 6.2 6.3 6.3 6.4
TCUnmapped 4.3 6.6 8.4 6.5 6.6 6.2 6.7 6.9 6.8 6.4 6.3 6.3 6.5 6.3 6.1 7.6 6.1 6.3 6.2 6.1 5.8 5.9 6.2 6.1 6.0 5.7 5.8 6.1 6.0 5.8 5.6 5.9 6.1 6.2 6.0 6.0 5.9 6.3 6.2 6.1 5.9 6.0 6.3 8.0 6.2 7.7 6.1 6.4 6.3 6.1 5.9 5.0 5.1 6.2 5.9 7.4 5.9 6.2 7.7 5.9 5.7 5.9 6.1 6.1 5.9 5.8 5.9 6.2 6.1 6.1 5.9 6.2 6.5 6.5
TGMAPQ >= 30 5.9 7.6 7.5 7.7 7.6 7.6 7.2 7.7 7.8 7.6 7.5 7.6 7.7 7.7 7.6 7.8 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.8 7.7 7.7 7.8 7.7 7.8 7.8 7.7 7.8 7.7 7.8 7.7 7.8 7.7 7.7 7.7 7.7 7.7 7.7 7.8 7.7 7.7 7.7 7.7 7.7 6.7 6.5 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.6
TGMAPQ >= 20 6.1 7.9 7.9 8.0 8.0 7.9 7.4 8.1 8.1 7.7 7.6 7.7 8.0 8.0 7.7 8.0 7.9 7.8 7.8 7.9 7.8 8.0 7.9 7.8 7.8 7.9 8.0 8.0 8.0 8.2 8.0 7.9 8.0 7.9 8.0 7.9 7.9 7.9 8.0 8.0 7.8 7.7 7.9 7.9 7.7 7.7 7.7 7.8 7.7 7.6 7.8 6.6 6.5 7.9 7.7 7.8 7.6 7.8 7.7 7.6 7.4 7.6 7.5 7.6 7.5 7.5 7.5 7.5 7.7 7.6 7.5 7.4 7.4 7.4
TGMAPQ >= 10 6.2 8.0 8.0 8.1 8.2 8.0 7.5 8.4 8.3 7.6 7.7 7.7 8.3 8.2 7.7 8.2 8.1 7.9 8.0 8.0 7.8 8.1 8.0 7.9 7.9 7.7 8.0 8.0 7.9 8.2 8.1 8.0 8.0 8.0 8.1 8.0 8.1 8.1 8.2 8.1 7.8 7.9 8.1 8.2 8.0 7.9 7.8 7.9 7.6 7.5 7.8 6.6 6.6 8.0 7.8 7.8 7.6 7.7 7.6 7.5 7.3 7.7 7.6 7.8 7.7 7.6 7.6 7.6 7.9 7.8 7.6 7.5 7.6 7.4
TGMAPQ >= 3 6.0 7.9 7.7 7.6 8.0 8.0 7.2 7.9 7.8 7.0 7.1 7.2 7.8 7.7 7.4 7.6 7.5 7.5 7.4 7.5 7.4 7.8 7.6 7.5 7.6 7.5 7.8 7.8 7.9 8.0 7.8 7.6 7.5 7.6 7.8 7.9 7.9 8.0 8.2 8.0 8.1 8.0 8.0 8.3 8.0 7.9 7.6 7.8 7.5 7.1 7.4 6.3 6.5 8.0 7.5 7.6 7.2 7.3 7.3 7.4 7.3 7.7 7.7 7.8 7.7 7.9 7.8 8.0 8.4 7.9 7.9 7.6 7.5 7.7
TGMAPQ < 3 6.1 7.8 7.7 7.9 7.8 7.8 7.3 7.9 7.9 7.5 7.5 7.6 7.9 7.8 7.6 7.8 7.8 7.7 7.8 7.8 7.8 7.9 7.8 7.8 7.8 7.7 7.9 7.8 7.8 7.9 7.8 7.8 7.9 7.8 7.9 7.8 7.9 7.8 7.9 7.9 7.8 7.8 7.9 7.9 7.8 7.8 7.7 7.8 7.7 7.6 7.7 6.7 6.6 7.8 7.7 7.7 7.6 7.6 7.6 7.7 7.6 7.8 7.7 7.7 7.7 7.8 7.6 7.7 7.8 7.8 7.7 7.6 7.7 7.6
TGUnmapped 5.3 6.9 7.1 7.2 7.0 6.7 6.5 7.1 7.2 6.8 6.6 6.7 6.9 6.9 6.8 6.7 6.8 6.9 6.9 6.9 6.6 6.7 6.9 6.9 6.9 8.4 6.9 7.0 7.0 6.9 6.6 6.8 6.9 6.8 6.7 6.5 6.7 6.8 6.8 6.7 6.4 6.6 6.7 6.8 6.7 6.5 6.6 6.8 6.8 6.7 8.2 5.7 5.7 6.9 6.7 6.7 6.7 6.8 6.7 6.7 8.0 6.6 6.6 6.6 8.2 6.3 6.4 6.5 6.5 6.3 6.1 6.2 6.4 6.3
TTMAPQ >= 30 6.6 9.0 8.6 8.3 8.1 8.3 8.7 8.8 8.8 8.7 8.7 8.7 8.7 8.6 8.5 8.3 8.2 8.1 8.1 8.1 8.1 8.1 8.2 8.2 8.2 8.2 8.1 8.0 8.1 8.0 8.0 8.0 8.0 8.0 8.0 8.0 8.0 8.0 8.0 8.0 7.9 8.0 8.0 8.0 8.0 8.0 8.0 7.9 7.9 7.9 7.9 6.7 6.7 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 8.0 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9 7.9
TTMAPQ >= 20 6.5 8.8 8.5 8.1 8.0 8.1 8.4 8.4 8.3 8.2 8.2 8.4 8.3 8.2 8.0 7.9 7.8 7.7 7.6 7.4 7.5 7.5 7.5 7.5 7.4 7.4 7.4 7.4 7.4 7.2 7.2 7.2 7.3 7.4 7.4 7.3 7.3 7.3 7.3 7.2 7.2 7.4 7.5 7.3 7.3 7.3 7.3 7.2 7.1 7.2 7.4 6.2 6.2 7.4 7.3 7.5 7.6 7.5 7.5 7.5 7.6 7.7 7.8 7.8 7.9 7.8 7.8 7.7 7.6 7.5 7.4 7.3 7.2 7.3
TTMAPQ >= 10 6.6 8.7 8.4 8.1 7.8 7.8 8.0 7.8 7.7 7.6 7.7 7.8 7.8 7.6 7.4 7.1 7.1 6.9 6.9 6.6 6.8 6.6 6.7 6.7 6.5 6.5 6.5 6.5 6.6 6.4 6.4 6.4 6.4 6.5 6.5 6.6 6.4 6.4 6.4 6.2 6.1 6.3 6.4 6.2 6.2 6.0 6.1 6.0 5.9 6.0 6.2 5.3 5.3 6.2 6.1 6.2 6.2 6.1 6.1 6.0 6.2 6.2 6.3 6.4 6.4 6.3 6.2 6.2 6.2 6.2 6.2 6.3 6.3 6.5
TTMAPQ >= 3 6.8 9.0 8.8 8.7 8.5 8.4 8.5 8.4 8.4 8.3 8.3 8.4 8.2 8.0 7.9 7.7 7.7 7.4 7.5 7.1 7.1 6.9 6.9 7.0 6.9 7.1 7.1 7.0 6.9 6.6 6.5 6.4 6.6 6.8 6.9 6.7 6.5 6.6 6.5 6.6 6.6 6.8 7.0 6.7 6.3 6.0 6.1 6.0 5.8 5.9 6.1 5.1 5.1 6.2 6.2 6.2 6.3 6.5 6.5 6.5 6.5 6.5 6.8 6.8 6.9 6.8 6.7 6.5 6.3 6.2 6.3 6.4 6.5 6.7
TTMAPQ < 3 6.6 9.0 8.6 8.3 8.1 8.2 8.6 8.7 8.6 8.5 8.4 8.5 8.4 8.2 8.1 7.9 7.9 7.8 7.8 7.7 7.8 7.7 7.7 7.7 7.6 7.7 7.6 7.6 7.6 7.5 7.4 7.4 7.5 7.6 7.6 7.6 7.5 7.5 7.5 7.4 7.4 7.5 7.5 7.5 7.4 7.4 7.4 7.3 7.3 7.3 7.4 6.3 6.3 7.4 7.3 7.4 7.4 7.4 7.4 7.3 7.4 7.5 7.5 7.5 7.4 7.4 7.5 7.4 7.5 7.4 7.4 7.5 7.4 7.5
TTUnmapped 6.7 9.9 9.7 9.4 9.5 10.0 10.9 11.3 11.3 11.4 11.7 12.3 12.5 12.5 14.2 12.8 13.2 13.2 13.1 13.1 13.4 13.8 13.7 13.5 13.2 13.1 13.1 12.9 12.5 12.2 12.1 12.3 12.2 12.1 11.9 11.9 12.1 11.9 11.9 11.7 11.7 12.2 12.1 12.0 11.8 11.8 11.9 11.8 11.3 10.9 10.8 9.0 8.9 10.4 10.1 10.1 10.2 11.5 9.7 9.4 9.4 9.7 9.5 10.8 8.9 9.0 9.1 9.0 8.8 8.5 8.6 8.9 8.7 8.5
Percentage of 2-mers at each position of the read for each alignment quality interval. Numbers shown in bold corresponds to p-values of <= 1e-100.

Error Distribution

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3

Nucleotide Composition MAPQ >= 30

A C G T N

Nucleotide Composition MAPQ >= 20

A C G T N

Nucleotide Composition MAPQ >= 10

A C G T N

Nucleotide Composition MAPQ >= 3

A C G T N

Nucleotide Composition MAPQ < 3

A C G T N

Nucleotide Composition Unmapped

A C G T N

Length Distribution MAPQ >= 30

Length Distribution MAPQ >= 20

Length Distribution MAPQ >= 10

Length Distribution MAPQ >= 3

Length Distribution MAPQ < 3

Length Distribution Unmapped

Top 5 over-represented 2-mers MAPQ >= 30

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
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AA

CA

TG

CT

TT

AA

CA

TG

AG

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

AA

TG

CA

CT

TT

AA

TG

CA

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

AA

TG

CA

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

AA

TG

CA

CT

TT

AA

CA

TG

AG

TT

AA

CA

TG

AG

TT

AA

TG

CA

AG

TT

AA

CA

TG

CT

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 20

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AG

AA

CA

CT

AT

TT

AA

TG

AG

GG

TT

AA

TG

AG

CA

TT

TG

AG

AA

CA

TT

TG

AA

AG

CA

TT

TG

AA

CA

AG

TT

AA

TG

CT

CA

TT

TG

CA

AA

CT

TT

TG

CA

AA

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

AG

TT

AA

TG

CT

CA

TT

TG

CA

CT

AA

TT

TG

CA

AA

CT

TT

CA

TG

CT

AA

TG

TT

CA

CT

AA

TG

TT

CA

CT

AA

TG

CA

TT

CT

AG

TG

CA

CT

TT

AG

TG

CA

CT

TT

AG

TG

CA

CT

TT

AG

TG

CA

CT

TT

AG

TG

CA

AG

TT

CT

CA

TG

TT

CT

AG

TG

CA

AG

CT

TT

TG

CA

AG

CT

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

TT

TG

CA

AG

CT

TT

TG

CA

AG

CT

TT

TG

CA

AG

GG

CT

TG

CA

AG

CT

TT

TG

CA

AG

CT

TT

TG

CA

TT

CT

AG

TG

CA

CT

AG

TT

TG

CA

AG

CT

TT

TG

CA

AG

CT

GG

TG

CA

CT

AG

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

GG

TG

CA

CT

GG

AG

CT

TG

CA

TT

AG

TG

CA

CT

TT

AG

TG

CA

CT

AG

TT

CA

TG

CT

AG

TT

CA

TG

CT

AG

AA

TG

CT

CA

AG

AA

TG

CA

CT

AG

AA

CA

TG

AG

CT

AA

CT

CA

AG

TG

AA

TG

CA

CT

AG

AA

CA

AA

GA

TG

CT

AA

AG

AT

CA

TG

TG

CA

AA

AG

TT

TG

CA

AA

AG

CT

TG

AA

CA

TT

CT

AA

TG

TT

CT

CA

TG

AA

TT

CA

CT

AA

CA

TG

TT

CT

AA

CA

TG

CT

TT

AA

TT

CA

CT

TG

AA

CA

TT

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

AG

AA

TG

CA

TT

AG

AA

CA

TG

GG

TT

AA

CA

AG

TG

TT

AA

AG

CA

TG

GG

AA

CA

AG

TG

GG

AA

CA

AG

CC

TG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 10

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AG

CA

GG

CT

AA

TT

GG

TG

AA

AG

TT

TG

GG

AG

CA

TG

TT

CA

AG

CT

TG

TT

AG

GG

CA

GG

TG

TT

CA

CT

TT

TG

CT

GG

CA

TG

TT

CA

CT

AG

TG

CA

TT

GG

AG

CA

GG

TT

TG

AG

TT

TG

CA

GG

AG

CT

TT

TG

CA

AG

TG

TT

CA

CT

AG

TG

CA

TT

CT

AG

CT

CA

TG

TT

GG

TG

CT

CA

GG

AG

TG

CA

CT

AG

GG

TG

CT

CA

AG

CC

TG

CA

GG

CT

AG

TG

CA

GG

CT

AG

TG

GG

CT

CA

AG

TG

CA

CT

CC

GG

TG

AG

CA

CT

GG

CA

TG

GG

AG

CT

TG

GG

AG

CA

CT

GG

CA

AG

TG

CT

TG

CA

CC

GG

AG

CA

TG

GG

AG

CC

CA

TG

GG

AG

CT

TG

GG

CA

AG

CC

GG

CA

TG

CT

AG

CA

TG

GG

AG

CT

TG

CT

CA

GG

AG

GG

TG

CA

CT

CC

CA

TG

CT

GG

CC

CA

TG

GG

AG

CT

TG

GG

CA

CC

CT

TG

CA

GG

CT

CC

TG

CA

GG

CT

CC

TG

CA

GG

CT

AG

TG

GG

CT

CA

CC

CT

TG

GG

CA

CC

TG

CT

CA

GG

CC

TG

CT

CC

CA

AG

TG

CA

CC

GG

CT

TG

CC

CA

CT

AG

CT

TG

CA

GG

AG

CA

TG

CT

CC

GG

CA

CC

CT

TG

AG

CT

CA

CC

AG

TG

CT

TG

CA

CC

GG

CA

AA

GA

CT

TG

AG

AA

CT

CA

TG

TG

CA

CC

AG

CT

TG

CT

CA

AG

CC

CA

TG

CT

CC

AG

CT

CA

TG

CC

AG

CT

TG

CA

AG

CC

CA

CC

CT

TG

AG

CA

CT

CC

TG

AG

CT

CA

CC

AG

TG

CA

CT

CC

TG

AA

CC

CT

CA

TG

AA

CC

CA

TG

CT

AA

CT

CC

TG

CA

AA

CC

CT

CA

TG

AA

CC

CA

CT

TG

AA

CC

CA

CT

AG

AA

TG

CC

AG

CA

CT

CC

CA

TG

AA

GG

CA

CC

AA

TG

AG

CC

AG

AA

CA

TG

CC

AA

CA

AG

TG

CC

AA

CA

AG

TG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

CA

AG

GG

AA

CT

TT

GG

TG

AA

AG

TT

TG

GG

CA

AA

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

TT

TG

CA

GG

CT

TT

TG

AA

CA

CT

TT

CA

TG

CT

CC

TT

CA

TG

AA

AG

TT

CA

AG

AA

GG

TT

CA

AG

AA

TG

TT

CT

CA

TG

AG

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

TT

CT

AG

CA

TG

TT

TG

CA

AG

CT

TT

AG

TG

CA

CC

AG

GG

CT

TG

TT

GG

CT

AG

TT

CC

GG

CA

TG

AG

CT

GG

AG

CT

TG

CA

GG

TG

CA

AG

CT

GG

AG

TG

CA

CT

GG

AG

TG

CA

CT

GG

TG

CT

AG

CA

GG

TG

CA

AG

CT

GG

TG

CA

CC

CT

GG

CA

TG

AG

CC

GG

TG

CA

AG

CC

GG

TG

CA

AG

CC

GG

CA

TG

AG

CC

GG

CA

AG

TG

CC

GG

CA

AG

TG

CT

GG

TG

CA

CC

AG

CA

TG

CC

CT

GG

CA

TG

CC

GG

AG

CA

TG

GG

CC

CT

TG

CA

GG

CT

CC

TG

GG

CA

CC

CT

TG

CA

CT

GG

CC

TG

CC

CA

GG

CT

CT

TG

CC

GG

CA

TG

CT

CC

CA

TC

CC

TG

CT

CA

TC

CC

TG

CA

CT

GG

CC

TG

CA

CT

GG

CC

CT

TG

GG

CA

CC

TG

CA

CT

GG

CC

CA

TG

AG

CT

CC

CT

CA

AG

AA

CC

CT

CA

TG

GG

CA

AA

GA

CT

CC

AG

AA

CT

AT

CC

TG

CC

CA

AA

CT

CT

AA

CC

GG

TG

TG

GG

CC

CT

AA

CT

AA

CC

GG

CA

CT

CC

AG

AA

TG

CT

CC

GG

CA

TG

CT

CA

AA

CC

TG

CT

AA

CA

TG

AG

AA

TG

CT

CA

CC

AA

TG

CT

CA

AG

AA

TG

CT

AG

CA

AA

TG

CT

CC

CA

TG

AA

CT

CA

CC

TG

AA

CT

CA

CC

TG

AA

CA

CT

CC

TG

AA

AG

CA

CT

AA

TG

CA

GG

AG

AA

TG

AG

CA

CC

AA

CC

AG

TG

CA

AA

CC

TG

CA

AG

CC

AA

CA

TG

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ < 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AA

AG

CA

AT

CT

TT

AA

TG

AG

AT

TT

AA

TG

AG

CA

TT

TG

AA

CA

AG

TT

AA

TG

CA

AG

TT

AA

TG

CA

AG

TT

AA

TG

CA

CT

TT

TG

AA

CA

CT

TT

TG

CA

AA

CT

TT

AA

CA

TG

AG

TT

AA

CA

TG

AG

TT

AA

CA

TG

CT

TT

TG

AA

CA

CT

TT

TG

AA

CA

CT

TT

CA

TG

AA

CT

TT

TG

AA

CA

CT

TT

TG

CA

AA

AG

TT

TG

CA

AA

CT

TT

TG

CA

AA

CT

TG

CA

TT

AA

CT

TG

TT

CA

AA

CT

TG

CA

TT

AA

CT

TG

TT

CA

AG

AA

CA

TG

TT

AA

AG

TG

CA

TT

AA

AG

TG

CA

TT

AA

AG

TG

CA

TT

AA

AG

TG

CA

TT

AA

AG

CA

TG

TT

AA

AG

TG

CA

TT

AA

AG

CA

TG

AA

TT

AG

CA

TG

TT

AA

AG

TG

CA

TT

AA

CT

TG

CA

TT

AA

AG

TG

CA

TT

AA

CT

CA

TG

TT

AA

AG

TG

CA

AA

TT

AG

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

AG

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

TT

CT

AA

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

AG

TG

AA

CA

TT

CT

CA

TG

AA

TT

CT

CA

TG

AA

AG

CT

CA

AA

TG

CT

TT

CA

AA

TG

CT

TT

AA

CA

GA

TG

CT

AA

AG

CA

AT

TG

TG

CA

AA

TT

AG

AA

CA

TG

CT

TT

AA

TG

CA

TT

CT

AA

CA

TG

TT

CT

AA

TG

CA

TT

CT

AA

CA

TG

TT

CT

CA

AA

TG

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

TT

CT

AA

TG

CA

TT

CT

AA

TG

CA

TT

CT

AA

TG

CA

TT

CT

AA

TG

CA

TT

CT

AA

CA

TG

TT

CT

AA

CA

TG

TT

CT

AA

TG

CA

TT

AG

AA

TG

CA

TT

AG

AA

CA

TG

TT

AG

AA

CA

TG

TT

AG

AA

TG

CA

TT

AG

AA

CA

TG

TT

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers Unmapped

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AA

AT

GA

CA

AG

AA

AT

TT

TG

GA

TT

AA

TC

AT

TG

TT

AA

AT

TG

CA

AA

TT

AT

CA

TG

TT

AA

GA

AT

CA

AA

TT

AT

CA

TC

TT

AA

AG

AT

TG

TT

AA

GA

AT

TG

TT

AA

AG

CA

AT

TT

AA

AT

CA

TG

TT

AA

AT

CA

TG

TT

AA

AT

TG

GG

TT

AA

AT

TG

CA

TT

AA

CA

TG

AT

TT

AA

TC

AT

CA

TT

AA

CA

AT

TG

TT

AA

AG

AT

TG

TT

AA

TG

AT

CA

TT

AA

CA

TG

AT

TT

AA

AG

AT

CA

TT

AA

AT

GG

TG

TT

AA

GA

TG

AT

TT

AA

TG

AT

CA

TT

AA

AT

TG

CA

TT

AA

TG

AT

CA

TT

AA

TG

AT

CA

TT

AA

TG

AT

CC

TT

AA

TG

CA

AT

TT

AA

GA

TG

CA

TT

AA

AG

AT

CA

TT

AA

GA

AT

TG

TT

AA

TG

GG

AT

TT

AA

GG

CC

TG

TT

AA

GG

TG

CA

TT

AA

GG

AT

CA

TT

AA

GG

TG

AT

TT

AA

GG

TG

AT

TT

AA

CT

GG

TG

TT

AA

GG

TG

CA

TT

AA

GG

AT

CA

TT

AA

CA

GG

AT

TT

AA

AT

GG

TG

TT

AA

TC

GG

TG

TT

AA

CT

GG

TG

TT

AA

TC

GG

CA

TT

AA

GG

AT

TG

TT

AA

GG

TG

CC

TT

AA

GG

TG

CC

TT

AA

AT

GG

CA

TT

AA

TG

GG

CA

TT

AA

GG

TG

CA

TT

AA

CC

GG

TG

TT

AA

GG

TG

CC

TT

AA

GG

CA

TG

TT

AA

GG

TC

TG

TT

AA

GG

CT

AT

TT

AA

GG

TG

AT

TT

GG

AA

TC

TG

TT

GG

AA

CT

CA

TT

GG

AA

TG

CA

TT

GG

AA

AT

TG

TT

GG

AA

CT

TG

TT

GG

AA

CC

TG

GG

TT

AA

TG

CA

GG

TT

AA

GA

AT

AA

GG

TT

AT

GA

AA

GG

TT

AT

TG

AA

GG

TT

GA

CC

AA

GG

TT

GA

CA

AA

GG

TT

GA

AT

AA

GG

TT

GA

AT

AA

GG

TT

GA

AG

GG

AA

TT

GA

CC

 
Top 5 enriched 2-mers at each positon withion reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 20 over-represented 10-mers

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3 Unmapped
SeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-value
CACTTTGGGA 1006373 0.0e+00 TTTTTTTTTT 252858 0.0e+00 GGAGGCTGAG 106219 0.0e+00 CTCCTGACCT 25265 0.0e+00 GGAGGCTGAG 182004 0.0e+00 TTTTTTTTTT 3947543 0.0e+00
GGCTGGAGTG 973169 0.0e+00 AAAAAAAAAA 235265 0.0e+00 GAGGCTGAGG 104694 0.0e+00 TCCTGACCTC 22296 0.0e+00 GAGGCTGAGG 180863 0.0e+00 AAAAAAAAAA 2009228 0.0e+00
AGCACTTTGG 958297 0.0e+00 GGAGGCTGAG 110949 0.0e+00 AGGCTGAGGC 98490 0.0e+00 GGAGGCTGAG 22187 0.0e+00 AGGCTGAGGC 167707 0.0e+00 ATTCCATTCC 573116 0.0e+00
ATCCCAGCAC 935741 0.0e+00 GAGGCTGAGG 109594 0.0e+00 GGCTGAGGCA 92672 0.0e+00 GAGGCTGAGG 22159 0.0e+00 CTCCTGACCT 166399 0.0e+00 TTCCATTCCA 569917 0.0e+00
CAGCACTTTG 927041 0.0e+00 TAATCCCAGC 102843 0.0e+00 GCTGAGGCAG 90739 0.0e+00 AGGCTGAGGC 21170 0.0e+00 GGCTGAGGCA 156447 0.0e+00 CCATTCCATT 559737 0.0e+00
TCCCAGCACT 926542 0.0e+00 AGGCTGAGGC 99940 0.0e+00 CTCAGCCTCC 90692 0.0e+00 GGCTGAGGCA 19790 0.0e+00 CTCAGCCTCC 155134 0.0e+00 TCCATTCCAT 556534 0.0e+00
CCCAGCACTT 894812 0.0e+00 TGTAATCCCA 99656 0.0e+00 CCTCAGCCTC 90191 0.0e+00 GCTGAGGCAG 19591 0.0e+00 CCTCAGCCTC 155066 0.0e+00 CATTCCATTC 546071 0.0e+00
GCCCAGGCTG 850747 0.0e+00 GTAATCCCAG 97441 0.0e+00 CTGAGGCAGG 88038 0.0e+00 CTGAGGCAGG 19420 0.0e+00 GCTGAGGCAG 153722 0.0e+00 GGAATGGAAT 521195 0.0e+00
TGGAGTGCAG 831278 0.0e+00 CTGTAATCCC 96393 0.0e+00 CTCCTGACCT 88003 0.0e+00 CCTCAGCCTC 19178 0.0e+00 TCCCAGCTAC 151537 0.0e+00 TGGAATGGAA 519623 0.0e+00
GGAGTGCAGT 805650 0.0e+00 CCTGTAATCC 95017 0.0e+00 TCCCAGCTAC 87576 0.0e+00 CTCAGCCTCC 19039 0.0e+00 CTGAGGCAGG 150751 0.0e+00 AATGGAATGG 513248 0.0e+00
CCAAAGTGCT 723783 0.0e+00 GGCTGAGGCA 90513 0.0e+00 TAATCCCAGC 87203 0.0e+00 TCCCAGCTAC 18758 0.0e+00 CCCAGCTACT 149904 0.0e+00 ATGGAATGGA 511671 0.0e+00
TGCTGGGATT 717078 0.0e+00 CTCAGCCTCC 90433 0.0e+00 CCCAGCTACT 86919 0.0e+00 CCCAGCTACT 18634 0.0e+00 TCCTGACCTC 147770 0.0e+00 GAATGGAATG 497651 0.0e+00
GTGCAGTGGC 693610 0.0e+00 TCCCAGCTAC 89891 0.0e+00 GCCTCAGCCT 84035 0.0e+00 AGGCAGGAGA 18217 0.0e+00 TAATCCCAGC 146050 0.0e+00 GGGGGGGGGG 334923 0.0e+00
ACTGCAACCT 668981 0.0e+00 CCTCAGCCTC 89527 0.0e+00 TGTAATCCCA 83147 0.0e+00 GCCTCAGCCT 18180 0.0e+00 GCCTCAGCCT 143878 0.0e+00 CTTTTTTTTT 268915 0.0e+00
TTGGGAGGCT 666906 0.0e+00 CCCAGCTACT 88683 0.0e+00 GTAATCCCAG 83077 0.0e+00 TGAGGCAGGA 18150 0.0e+00 TGAGGCAGGA 140281 0.0e+00 TTTTTTTTTG 258466 0.0e+00
CTGCAACCTC 656200 0.0e+00 GCTGAGGCAG 86794 0.0e+00 TGAGGCAGGA 81589 0.0e+00 AGGTCAGGAG 18083 0.0e+00 AGGCAGGAGA 140168 0.0e+00 ACACACACAC 244322 0.0e+00
CACTGCAACC 645892 0.0e+00 CTGAGGCAGG 82930 0.0e+00 AGGCAGGAGA 80822 0.0e+00 GAGGCAGGAG 18000 0.0e+00 GGGAGGCTGA 139970 0.0e+00 CACACACACA 240835 0.0e+00
GTTGCCCAGG 629466 0.0e+00 GGGAGGCTGA 82254 0.0e+00 GAGGCAGGAG 80629 0.0e+00 GGCAGGAGAA 17897 0.0e+00 TGTAATCCCA 139789 0.0e+00 CCCCCCCCCC 222672 0.0e+00
TCCAGCCTGG 597850 0.0e+00 AAATACAAAA 81402 0.0e+00 CTGTAATCCC 80395 0.0e+00 TTTTAGTAGA 17563 0.0e+00 GAGGCAGGAG 139069 0.0e+00 GTGTGTGTGT 221256 0.0e+00
CTCCAGCCTG 594262 0.0e+00 AAAATACAAA 80619 0.0e+00 GGCAGGAGAA 79708 0.0e+00 TTTAGTAGAG 17440 0.0e+00 GTAATCCCAG 138929 0.0e+00 TGTGTGTGTG 219975 0.0e+00