ezh2_y641f_k4

Mapping stats: 84% aligned (59.7M aligned out of 71.4M total) 

Number of alignments in various mapping quality (MAPQ) intervals and number of unmapped sequences. The percentage and number of alignments in each category is given in brackets.

Mean Base Quality

Mean base quality of reads with low and high mapping quality.

Error Profile MAPQ >= 30

Mismatches Insertions Deletions

Error Profile MAPQ >= 20

Mismatches Insertions Deletions

Error Profile MAPQ >= 10

Mismatches Insertions Deletions

Error Profile MAPQ >= 3

Mismatches Insertions Deletions

Error Profile MAPQ < 3

Mismatches Insertions Deletions

Nucleotide Over-representation along read

Mer Q 1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
AAMAPQ >= 30 6.8 6.2 6.0 5.9 5.9 5.7 5.8 5.6 5.6 5.6 5.6 5.5 5.5 5.4 5.4 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1
AAMAPQ >= 20 5.7 5.2 5.0 4.9 4.9 4.7 4.8 4.6 4.6 4.7 4.6 4.5 4.5 4.4 4.3 4.3 4.2 4.2 4.2 4.1 4.1 4.1 4.1 4.2 4.2 4.2 4.2 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.0 4.1 4.1 4.1 4.1 4.0 4.1 4.0 4.0 4.0 4.0 4.0 4.0 4.1 4.1 4.1 4.0 4.0 4.0 4.1 4.1 4.1 4.1 4.1 4.2 4.2 4.2 4.2 4.2 4.3 4.3 4.3 4.4 4.5 4.5 4.4 4.4 4.4 4.4 4.4
AAMAPQ >= 10 7.0 6.6 6.3 6.1 6.2 6.1 6.2 5.9 6.0 6.2 6.1 5.9 5.8 5.6 5.5 5.6 5.6 5.4 5.5 5.5 5.4 5.5 5.6 5.5 5.6 5.7 5.6 5.6 5.6 5.7 5.6 5.7 5.7 5.6 5.6 5.6 6.0 5.9 6.0 5.7 5.9 5.8 5.6 5.7 5.7 5.8 5.9 6.0 6.2 6.1 6.0 6.0 5.9 6.0 6.1 6.1 6.2 6.1 6.0 6.2 6.2 6.3 6.5 6.4 6.4 6.3 6.4 6.5 6.5 6.5 6.6 6.7 6.7 6.6
AAMAPQ >= 3 6.8 6.3 5.9 5.8 5.8 5.7 5.9 5.9 6.1 6.1 6.1 5.7 5.7 5.8 5.5 5.8 5.9 5.6 5.3 5.3 5.2 5.5 5.4 5.4 5.4 5.4 5.3 5.4 5.5 5.6 5.6 5.7 5.9 5.6 5.6 5.8 6.0 5.9 6.0 5.7 5.8 5.8 5.5 5.2 5.6 5.8 6.3 6.5 6.0 6.3 6.4 6.1 6.1 6.3 6.6 6.6 6.7 6.3 6.2 6.3 6.4 6.8 6.9 6.9 7.0 6.8 6.7 6.8 6.8 6.9 7.1 7.2 6.9 6.6
AAMAPQ < 3 6.6 6.1 5.8 5.7 5.6 5.5 5.6 5.4 5.3 5.5 5.5 5.4 5.4 5.3 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.2 5.1 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.2 5.1 5.1 5.2 5.1 5.1 5.1 5.1 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.3 5.3 5.3 5.3 5.2 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.3
AAUnmapped 3.3 3.0 2.9 2.9 2.8 2.8 55.2 2.8 2.7 2.7 2.7 2.7 3.0 2.7 2.6 2.6 2.6 2.6 2.5 2.6 2.6 2.7 3.1 54.3 2.7 2.6 2.8 2.5 2.5 2.5 2.6 2.6 2.6 2.5 2.5 2.5 2.5 2.5 2.6 2.5 2.5 2.5 2.7 2.7 2.5 2.5 2.5 2.5 2.7 2.6 2.5 2.5 2.5 2.5 2.5 2.6 2.5 2.5 2.5 2.5 2.5 2.6 2.6 2.6 2.8 3.5 47.6 53.5 53.9 53.4 52.4 48.7 41.8 33.9
ACMAPQ >= 30 5.0 5.1 4.7 4.8 5.0 4.7 4.9 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.6 4.7 4.6 4.6 4.6
ACMAPQ >= 20 4.7 4.7 4.4 4.4 4.6 4.2 4.4 4.3 4.2 4.3 4.3 4.2 4.3 4.2 4.3 4.2 4.3 4.2 4.2 4.2 4.2 4.1 4.1 4.1 4.0 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.2 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.0 4.1 4.0 4.0 4.0 4.0 4.0 4.0 4.1 4.0 4.0 4.0 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.9 3.8 3.9 3.8 3.8 3.9 3.9 3.9 3.9 3.9 3.9 4.0 4.0
ACMAPQ >= 10 4.9 4.9 4.5 4.8 5.0 4.9 5.0 4.7 4.7 5.0 4.9 4.9 4.8 4.8 5.0 5.0 5.0 4.9 4.8 4.8 5.0 4.8 4.9 4.8 4.7 4.8 4.8 4.7 4.8 4.9 4.8 5.0 5.0 4.9 4.7 4.9 4.8 4.9 4.9 4.8 4.9 4.8 4.8 4.6 4.7 4.7 4.6 4.6 4.9 5.0 4.8 4.8 4.8 4.7 4.8 5.0 4.9 4.9 5.0 5.0 5.2 5.2 5.0 5.2 5.0 5.0 4.8 4.8 4.9 4.8 4.8 4.9 4.8 4.9
ACMAPQ >= 3 5.0 4.8 4.5 4.7 4.7 4.8 5.0 4.7 5.1 5.2 5.3 5.0 5.0 5.0 5.1 5.1 5.2 5.0 5.0 5.0 5.3 5.0 5.0 5.0 5.0 5.1 5.3 4.9 5.1 5.1 5.1 5.2 5.0 5.0 4.8 5.1 5.0 5.0 4.8 4.8 5.1 4.9 4.9 4.8 4.9 4.7 4.5 4.8 5.0 5.0 4.7 4.8 4.7 4.5 4.6 4.7 4.8 4.9 4.8 5.0 5.3 5.0 5.0 5.1 5.1 4.9 4.9 4.9 4.9 4.9 4.9 4.8 5.1 5.3
ACMAPQ < 3 5.0 5.0 4.7 4.8 4.9 4.6 4.8 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.8 4.8 4.9 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.8 4.7 4.8 4.8 4.8 4.7 4.8 4.8 4.7 4.8 4.8 4.8 4.8 4.8 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.8 4.7 4.8 4.7 4.7 4.7 4.7 4.6 4.7 4.7 4.7 4.7 4.7 4.6 4.6 4.7
ACUnmapped 2.3 2.4 2.2 2.2 2.3 2.1 2.2 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.0 2.0 2.0 2.0 1.9 1.9 1.9 1.9 1.9 2.0 2.0 2.0 2.0 2.6 53.2 2.0 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.8 2.0 2.1 1.8 1.8 1.8 1.9 1.8 2.0 1.9 1.9 2.2 1.8 1.8 2.2 1.8 1.8 1.9 1.8 1.8 1.9 1.8 1.9 1.9 1.8 2.0 2.0 2.1 2.2 2.4 3.4 4.4 5.2
AGMAPQ >= 30 9.2 7.8 7.2 7.6 7.4 7.2 6.9 7.0 6.9 7.0 7.0 7.0 7.0 7.0 7.1 7.1 7.1 7.1 7.1 7.1 7.0 7.0 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.1 7.1 7.0 7.0 7.0 7.0 7.0
AGMAPQ >= 20 9.3 7.7 7.2 7.6 7.3 7.1 6.9 6.9 6.9 7.0 7.0 6.9 7.1 7.0 7.1 7.1 7.1 7.1 7.0 7.0 7.0 6.9 7.0 7.0 7.1 7.0 6.9 7.1 7.0 7.1 7.1 7.0 7.1 6.9 7.0 7.0 6.9 6.9 7.0 6.9 6.9 6.9 6.9 6.8 6.9 6.8 6.8 6.8 6.8 6.8 6.7 6.6 6.6 6.5 6.5 6.5 6.4 6.4 6.3 6.2 6.2 6.1 6.1 6.1 6.0 6.0 6.0 6.1 6.1 6.1 6.1 6.1 6.0 5.9
AGMAPQ >= 10 9.4 7.7 7.1 7.6 7.4 7.1 6.9 7.2 7.1 7.2 7.2 7.1 7.1 7.3 7.2 7.0 7.2 7.4 7.4 7.3 7.2 7.0 7.5 7.5 7.6 7.3 7.3 7.4 7.3 7.5 7.3 7.3 7.4 7.0 7.1 7.2 7.2 6.9 7.1 7.1 7.0 7.0 6.9 7.2 6.9 7.1 7.1 7.2 7.2 7.3 7.1 6.9 7.1 7.2 7.2 7.1 7.0 7.1 7.0 6.9 7.0 7.0 6.9 7.1 6.9 7.0 7.1 7.3 7.3 6.9 7.2 7.3 7.1 7.0
AGMAPQ >= 3 9.6 7.5 6.8 7.5 7.5 7.3 7.3 7.5 7.4 7.6 7.5 7.8 7.6 7.8 7.7 7.4 7.6 8.0 7.8 7.6 7.7 7.4 8.2 8.1 7.6 7.4 7.3 7.3 7.3 7.5 7.5 7.8 7.7 7.1 7.3 7.2 7.5 7.2 7.1 7.3 7.0 6.8 7.0 7.2 6.9 7.2 7.4 7.7 7.7 7.3 7.2 7.1 7.2 7.4 7.5 7.5 7.1 7.3 6.9 7.1 7.5 7.2 7.2 7.2 7.3 7.2 7.6 7.4 7.4 7.6 7.6 7.6 7.4 6.9
AGMAPQ < 3 9.2 7.7 7.0 7.5 7.3 7.1 6.9 7.0 7.0 7.0 7.1 7.0 7.0 7.1 7.1 7.0 7.1 7.1 7.1 7.0 7.1 7.0 7.2 7.1 7.1 7.0 7.0 7.1 7.2 7.1 7.1 7.1 7.1 7.0 7.1 7.1 7.1 7.1 7.0 7.1 7.1 7.1 7.0 7.1 7.0 7.0 7.1 7.1 7.1 7.1 7.1 7.0 7.1 7.1 7.1 7.1 7.1 7.1 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.1 7.1 7.0 7.1 7.0 7.0 6.9
AGUnmapped 3.9 3.3 3.1 3.3 3.3 3.1 3.4 55.3 3.1 55.6 3.0 3.0 3.0 3.0 3.2 3.1 3.4 55.1 3.1 3.7 54.9 3.0 3.0 2.9 3.0 3.0 3.0 3.3 3.0 3.8 54.3 2.9 3.0 2.8 2.9 3.0 2.8 3.1 2.9 2.9 3.2 2.8 3.1 2.7 2.7 2.7 2.7 2.7 2.7 2.9 3.0 2.6 2.6 2.6 2.5 2.5 2.5 2.5 2.5 2.5 2.5 2.5 2.5 2.4 2.5 2.4 2.7 2.7 2.7 2.9 3.1 4.3 5.8 7.1
ATMAPQ >= 30 4.3 3.8 4.0 3.7 3.8 3.6 3.7 3.7 3.5 3.6 3.5 3.5 3.5 3.5 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.4 3.3 3.4 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.3 3.2 3.2 3.2 3.2 3.2 3.2
ATMAPQ >= 20 3.9 3.5 3.5 3.3 3.3 3.2 3.3 3.2 3.1 3.1 3.1 3.1 3.1 3.1 3.0 3.0 3.0 3.0 3.0 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.8 2.8 2.9 2.9 2.9 2.9 2.8 2.9 2.9 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.7 2.7 2.8 2.8 2.7 2.8 2.7 2.8 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.7 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.7 2.7 2.7
ATMAPQ >= 10 5.8 5.2 5.4 5.2 5.1 5.1 5.2 5.1 4.6 4.8 5.0 5.0 4.8 4.9 4.7 4.7 4.8 4.7 4.6 4.6 4.6 4.5 4.6 4.8 4.6 4.7 4.6 4.7 4.7 4.6 4.6 4.6 4.6 4.6 4.6 4.5 4.5 4.6 4.6 4.8 4.6 4.8 4.7 4.6 4.6 4.8 4.7 4.6 4.6 4.9 4.7 4.7 4.7 4.5 4.7 4.5 4.8 4.7 4.5 4.6 4.6 4.4 4.7 4.6 4.5 4.6 4.5 4.5 4.4 4.5 4.6 4.6 4.7 4.7
ATMAPQ >= 3 6.2 5.8 5.8 5.3 5.6 5.3 5.3 5.1 4.7 4.9 5.0 4.9 4.8 4.8 4.8 4.7 4.9 4.7 4.6 4.4 4.4 4.3 4.6 4.7 4.7 4.8 4.7 4.7 4.6 4.4 4.5 4.7 4.9 4.9 4.5 4.6 4.8 4.9 4.7 5.1 4.8 4.9 4.7 4.4 4.2 4.6 4.4 4.6 4.8 4.8 4.6 4.5 4.7 4.2 4.5 4.7 4.8 5.0 4.9 4.7 4.7 4.6 4.7 4.8 4.9 5.0 4.6 4.6 4.6 4.6 4.8 4.9 5.1 5.0
ATMAPQ < 3 4.8 4.3 4.4 4.2 4.2 4.1 4.2 4.1 3.9 3.9 4.0 4.0 3.9 3.9 3.9 3.9 3.9 3.8 3.9 3.8 3.8 3.8 3.8 3.9 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.9 3.9 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.8 3.9 3.8 3.8 3.8 3.8 3.8 3.7 3.7 3.8 3.8 3.7 3.8 3.7 3.8 3.8 3.7 3.8 3.7 3.7 3.8 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.8 3.7
ATUnmapped 2.6 54.8 2.3 2.2 2.2 2.2 2.2 2.1 2.1 2.1 2.1 2.0 2.0 2.3 2.0 2.0 2.1 2.0 2.0 1.9 2.0 2.3 2.0 2.5 53.5 2.0 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 1.9 2.5 51.4 1.9 2.2 1.9 1.9 2.0 2.6 52.3 1.9 1.8 1.8 1.8 1.8 1.9 2.0 1.9 1.8 1.9 1.8 1.8 2.2 1.9 1.9 1.9 2.0 2.0 2.0 2.4 2.3 3.2 4.1 4.9
CAMAPQ >= 30 7.0 5.5 6.4 6.3 5.9 6.3 6.0 6.3 6.3 6.3 6.2 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.2 6.3 6.3 6.2 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2
CAMAPQ >= 20 6.7 5.2 6.2 6.1 5.6 6.0 5.6 6.0 6.0 6.0 5.8 6.0 5.9 5.9 6.0 5.9 5.9 5.9 5.8 5.9 5.8 5.8 5.8 5.8 5.7 5.7 5.7 5.8 5.8 5.8 5.7 5.8 5.7 5.7 5.8 5.8 5.7 5.7 5.7 5.7 5.6 5.7 5.6 5.7 5.7 5.6 5.6 5.6 5.6 5.5 5.5 5.5 5.5 5.5 5.4 5.4 5.4 5.4 5.3 5.4 5.3 5.2 5.3 5.2 5.2 5.3 5.3 5.3 5.3 5.3 5.3 5.3 5.2 5.3
CAMAPQ >= 10 7.7 5.9 7.1 7.0 6.8 7.0 6.6 7.2 7.2 7.3 7.2 7.2 7.2 7.1 7.2 7.3 7.2 7.2 7.4 7.3 7.2 7.2 7.2 7.4 7.1 7.0 7.1 7.3 7.5 7.3 7.3 7.5 7.3 7.2 7.3 7.4 7.3 7.4 7.2 7.2 7.0 7.1 7.2 7.1 7.2 7.1 7.1 7.2 7.3 7.1 7.1 7.1 7.3 7.3 7.1 7.2 7.1 7.0 7.1 7.3 7.3 7.3 7.2 7.2 7.0 7.2 7.2 7.3 7.1 7.3 7.4 7.2 7.2 7.2
CAMAPQ >= 3 7.8 6.0 7.3 7.4 7.1 7.3 6.9 7.7 7.7 7.6 7.5 7.3 7.3 7.1 7.2 6.9 7.1 7.0 6.8 6.8 7.1 7.4 7.2 7.2 7.1 7.0 7.2 7.4 7.3 7.5 7.8 7.8 7.2 7.3 7.5 7.6 7.9 7.4 7.3 7.2 6.9 7.2 7.0 6.9 7.0 7.2 7.2 7.2 7.1 7.0 6.7 6.9 6.8 7.1 6.9 6.8 6.7 6.7 7.0 7.1 7.3 7.0 7.0 7.3 7.1 7.2 7.1 7.3 7.2 7.1 7.2 7.2 7.3 7.2
CAMAPQ < 3 7.4 5.8 6.8 6.7 6.3 6.7 6.3 6.7 6.8 6.8 6.6 6.7 6.7 6.7 6.7 6.8 6.7 6.8 6.7 6.7 6.7 6.7 6.6 6.7 6.7 6.7 6.7 6.7 6.7 6.8 6.8 6.8 6.7 6.7 6.8 6.8 6.8 6.7 6.7 6.7 6.7 6.7 6.7 6.6 6.7 6.7 6.6 6.7 6.7 6.6 6.7 6.6 6.6 6.7 6.6 6.6 6.6 6.6 6.6 6.7 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.5
CAUnmapped 3.3 2.5 2.9 2.9 2.7 3.1 2.6 2.8 3.1 2.8 2.7 2.8 2.7 2.8 2.8 3.1 54.8 2.8 3.1 54.5 2.7 2.6 2.6 2.6 2.6 2.5 2.5 2.6 2.6 2.6 2.5 2.6 2.5 2.6 2.6 2.5 2.8 2.6 2.5 2.8 2.5 2.6 2.4 2.4 2.5 2.4 2.4 2.4 2.9 2.4 2.4 2.4 2.4 2.4 2.4 2.4 2.4 2.3 2.3 2.4 2.3 2.3 2.4 2.3 2.3 2.5 3.3 2.6 2.5 2.5 2.7 2.7 3.4 4.1
CCMAPQ >= 30 9.5 9.2 9.5 8.9 9.7 9.9 10.0 10.2 9.9 9.9 10.2 10.2 10.3 10.4 10.4 10.3 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.3 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.4 10.5 10.4 10.5 10.5 10.5 10.5 10.5 10.4 10.5 10.5 10.5 10.5 10.6 10.6 10.6
CCMAPQ >= 20 9.2 9.1 9.4 8.7 9.5 9.6 9.7 9.9 9.6 9.6 9.9 9.8 9.8 10.0 9.8 9.8 9.9 9.8 9.8 9.7 9.7 9.7 9.7 9.7 9.6 9.6 9.6 9.6 9.6 9.6 9.7 9.6 9.6 9.7 9.6 9.6 9.6 9.7 9.7 9.7 9.8 9.8 9.8 9.9 9.9 9.9 9.9 9.8 9.9 9.9 10.0 10.2 10.4 10.3 10.1 10.4 10.5 10.4 10.8 10.9 10.8 11.2 11.3 11.3 11.6 11.7 11.8 11.9 12.1 12.2 12.4 12.6 12.7 12.8
CCMAPQ >= 10 7.2 7.1 7.1 6.7 7.1 7.6 7.7 7.9 7.8 7.9 8.0 7.9 7.7 8.2 8.0 8.2 8.4 8.6 8.6 8.4 8.4 8.5 8.4 8.1 8.3 8.2 8.5 8.5 8.4 8.5 8.5 8.3 8.6 8.8 8.8 8.6 8.8 8.5 8.6 8.7 8.7 8.8 8.9 8.9 9.0 9.1 8.8 8.8 9.0 8.9 8.8 8.8 9.0 8.7 8.7 8.7 8.8 8.6 8.8 9.0 8.8 9.0 9.1 9.0 9.1 9.1 9.1 9.2 9.2 9.0 9.1 9.0 9.1 9.4
CCMAPQ >= 3 6.7 6.6 6.2 6.2 6.8 6.8 7.1 7.5 7.2 7.4 7.4 7.0 7.2 7.8 7.2 7.7 8.0 7.9 8.2 8.4 7.9 7.9 7.7 7.5 7.8 8.1 7.8 8.1 8.1 8.3 7.9 7.7 8.1 8.4 8.6 8.0 8.3 8.2 8.3 8.2 8.5 8.7 8.6 9.2 9.6 9.3 8.9 9.0 8.9 8.8 8.9 8.8 8.4 8.2 7.9 7.8 8.0 8.1 8.0 8.3 7.9 8.0 8.2 8.0 8.2 8.4 8.4 8.3 8.3 8.1 8.4 8.6 9.0 9.3
CCMAPQ < 3 8.9 8.7 9.0 8.4 9.1 9.4 9.5 9.6 9.4 9.4 9.6 9.7 9.6 9.8 9.7 9.7 9.9 9.9 9.8 9.8 9.8 9.8 9.8 9.8 9.8 9.8 9.8 9.8 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.9 9.8 9.9 10.0 9.9 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 9.9 9.9 10.0 9.9 9.9 10.0 10.0 10.0 10.1 10.1 10.1 10.1 10.1 10.1 10.0 10.1 10.1 10.2 10.2 10.2 10.3
CCUnmapped 3.8 3.7 3.8 3.4 3.8 3.8 3.8 3.9 3.8 3.7 3.8 3.8 3.7 3.8 3.7 3.7 3.9 3.6 3.6 3.6 3.6 3.6 3.6 3.7 3.7 3.7 4.2 55.2 3.8 3.8 3.8 3.9 4.6 55.3 4.1 4.0 4.7 55.4 4.2 4.2 4.3 4.2 4.4 4.6 4.6 4.7 4.7 4.8 4.8 4.8 4.9 5.8 55.8 5.7 5.1 5.9 5.7 5.5 5.5 5.9 5.4 5.8 6.2 5.6 5.6 5.7 5.7 5.7 5.7 5.8 5.8 5.8 6.2 6.2
CGMAPQ >= 30 5.6 3.8 5.2 5.7 5.2 6.2 5.5 6.2 6.2 6.1 6.1 6.2 6.2 6.2 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.2 6.3 6.3 6.2 6.2 6.3 6.2 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3 6.3
CGMAPQ >= 20 6.6 4.5 6.4 6.8 6.4 7.7 6.6 7.5 7.6 7.4 7.4 7.6 7.5 7.5 7.6 7.5 7.5 7.6 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.7 7.6 7.7 7.6 7.6 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.8 7.7 7.8 7.7 7.6 7.7 7.7 7.6 7.8 7.9 7.6 7.6 7.8 7.7 7.5 7.8 7.6 7.5 7.6 7.4 7.3 7.2 7.2 7.1 7.1 7.1 7.0 7.1 7.0 7.2
CGMAPQ >= 10 3.7 2.7 3.4 3.9 3.7 4.2 3.9 4.4 4.3 3.9 4.1 4.2 4.1 4.1 4.1 4.2 4.1 4.0 4.1 4.2 4.2 4.3 4.3 4.2 4.2 4.3 4.2 4.3 4.3 4.4 4.3 4.4 4.3 4.3 4.5 4.4 4.4 4.6 4.5 4.6 4.4 4.5 4.6 4.6 4.5 4.5 4.6 4.4 4.4 4.5 4.5 4.5 4.5 4.6 4.3 4.5 4.3 4.5 4.5 4.5 4.5 4.4 4.4 4.5 4.3 4.3 4.4 4.3 4.4 4.5 4.4 4.3 4.2 4.3
CGMAPQ >= 3 3.3 2.5 3.0 3.2 3.4 3.8 3.3 3.8 3.5 3.3 3.5 3.6 3.6 3.8 3.8 3.8 3.6 3.6 3.7 3.9 4.2 4.1 4.3 4.0 3.6 3.8 3.7 3.6 4.1 4.0 3.8 3.9 3.8 3.9 4.0 4.1 3.7 4.0 4.0 4.0 3.7 3.9 4.0 4.1 4.2 4.3 4.0 3.8 3.9 4.1 4.0 4.1 4.4 4.3 3.9 4.1 3.9 4.0 4.0 4.0 4.2 3.9 3.9 3.8 3.5 3.7 4.0 4.1 3.8 4.2 3.8 3.9 3.7 3.9
CGMAPQ < 3 5.0 3.5 4.7 5.2 4.8 5.6 5.0 5.7 5.6 5.5 5.5 5.6 5.6 5.6 5.6 5.5 5.5 5.5 5.5 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.7 5.6 5.6 5.7 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.6 5.7 5.6 5.6 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.7 5.8 5.7 5.7 5.7 5.7 5.7 5.8 5.7 5.7 5.8 5.7 5.8 5.7 5.8 5.8 5.8 5.8 5.8 5.8 5.8 5.8
CGUnmapped 3.5 2.2 3.1 55.7 3.0 3.6 3.2 3.6 3.7 3.6 3.7 55.8 3.7 3.6 3.6 3.6 3.6 4.0 3.7 3.8 3.7 3.7 3.6 4.0 3.7 3.8 3.8 4.4 55.3 3.8 3.7 4.0 3.7 4.4 55.1 3.9 3.7 4.4 55.1 4.3 54.5 3.7 3.6 3.7 3.8 4.3 54.5 3.6 3.7 3.6 3.6 3.5 4.3 54.4 3.8 3.5 3.8 3.4 3.6 3.7 4.1 3.3 3.8 3.3 3.4 3.4 3.7 3.3 3.4 3.4 3.4 3.4 3.5 4.0
CTMAPQ >= 30 7.7 7.1 7.4 7.2 6.9 7.2 7.1 7.3 7.1 7.2 7.2 7.2 7.2 7.1 7.2 7.1 7.1 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.2 7.1 7.1 7.2 7.1 7.2 7.2 7.2 7.1 7.2 7.1 7.1 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.1 7.1 7.2 7.2 7.2 7.1 7.1 7.1 7.1 7.2 7.1 7.1 7.1 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.1 7.0
CTMAPQ >= 20 7.2 6.8 7.1 6.9 6.5 6.9 6.7 6.9 6.7 6.7 6.7 6.8 6.7 6.6 6.8 6.7 6.7 6.8 6.7 6.7 6.8 6.8 6.7 6.6 6.7 6.6 6.7 6.7 6.6 6.7 6.6 6.6 6.7 6.7 6.6 6.6 6.6 6.5 6.5 6.6 6.5 6.6 6.6 6.6 6.6 6.5 6.6 6.5 6.5 6.6 6.4 6.4 6.4 6.3 6.3 6.2 6.3 6.3 6.0 6.2 6.1 6.0 6.1 6.0 5.9 5.9 5.9 5.8 5.7 5.7 5.7 5.7 5.7 5.7
CTMAPQ >= 10 7.5 7.0 7.4 7.0 6.7 7.1 7.1 7.3 7.0 7.1 7.2 7.5 7.5 7.4 7.7 7.4 7.3 7.4 7.4 7.4 7.6 7.6 7.3 7.3 7.2 7.2 7.3 7.3 7.1 7.1 7.1 7.1 7.4 7.2 7.4 7.1 7.3 7.2 7.3 7.2 7.5 7.6 7.4 7.7 7.3 7.4 7.8 7.3 7.3 7.5 7.6 7.4 7.5 7.4 7.3 7.4 7.7 7.7 7.4 7.5 7.5 7.6 7.4 7.3 7.5 7.5 7.3 7.2 7.4 7.0 6.9 7.1 7.0 6.8
CTMAPQ >= 3 7.4 7.1 7.8 7.3 6.8 7.1 7.0 7.2 7.2 7.3 7.3 8.1 7.3 7.3 7.9 7.3 7.5 7.8 7.5 7.7 8.0 7.5 7.2 7.2 7.4 7.3 7.8 7.4 7.0 7.2 7.0 6.9 7.1 6.9 7.4 7.2 7.1 7.5 7.6 7.5 7.5 8.0 7.8 7.7 7.5 7.6 7.4 7.2 7.5 7.5 8.1 7.9 8.2 7.3 7.7 7.6 7.8 8.3 7.8 7.9 7.7 7.6 7.6 7.6 7.6 7.4 7.2 7.4 7.3 6.9 6.7 6.6 6.6 6.7
CTMAPQ < 3 7.6 7.1 7.4 7.2 6.9 7.1 7.1 7.3 7.1 7.1 7.1 7.3 7.2 7.1 7.3 7.2 7.1 7.3 7.3 7.2 7.3 7.3 7.2 7.2 7.2 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.2 7.2 7.2 7.1 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.3 7.2 7.2 7.1 7.2 7.1 7.2 7.2 7.1 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.1 7.1 7.1 7.0 7.0 7.0 6.9 6.9
CTUnmapped 3.1 2.9 3.1 3.0 2.8 2.9 2.9 2.9 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.6 2.5 2.5 2.6 2.6 2.5 2.5 2.5 2.5 2.5 2.5 2.5 2.8 3.2 53.3 2.5 2.4 2.5 2.4 2.5 2.3 2.3 2.4 2.4 2.6 3.0 52.5 3.0 3.0 52.5 2.5 3.0 51.9 3.1 2.4 2.2 2.2 2.2 2.2 2.2 2.2 2.3 2.5 2.7
GAMAPQ >= 30 6.2 6.8 6.3 6.3 6.2 6.1 6.1 5.7 6.0 6.0 5.9 5.9 5.9 5.9 5.9 6.0 6.0 5.9 6.0 6.0 5.9 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 5.9 5.9 5.9 5.9 6.0 6.0 5.9 5.9 5.9 5.9 5.9 5.9 5.9
GAMAPQ >= 20 6.3 7.0 6.4 6.4 6.3 6.2 6.3 5.8 6.1 6.1 6.0 6.1 6.0 6.0 6.0 6.1 6.1 6.0 6.1 6.0 5.9 6.0 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.1 6.0 6.2 6.1 6.0 6.0 6.1 6.0 6.0 6.0 6.0 6.0 6.0 5.9 5.9 5.9 5.9 5.9 5.9 6.0 5.8 5.7 5.7 5.6 5.7 5.7 5.7 5.6 5.5 5.5 5.4 5.3 5.4 5.3 5.3 5.3 5.3 5.4 5.3 5.4 5.4 5.5 5.4 5.4 5.3
GAMAPQ >= 10 6.5 7.0 6.5 6.6 6.5 6.6 6.7 6.0 6.4 6.3 6.2 6.0 6.1 6.2 6.2 6.2 6.3 6.3 6.2 6.2 6.1 6.4 6.5 6.6 6.7 6.4 6.6 6.5 6.6 6.4 6.5 6.5 6.4 6.2 6.3 6.5 6.2 6.5 6.3 6.5 6.4 6.3 6.3 6.2 6.3 6.3 6.3 6.5 6.7 6.4 6.1 6.3 6.2 6.3 6.5 6.5 6.5 6.3 6.5 6.4 6.3 6.4 6.4 6.2 6.4 6.1 6.3 6.1 6.1 6.3 6.3 6.5 6.4 6.2
GAMAPQ >= 3 6.2 6.7 5.7 5.9 5.8 6.2 6.4 5.9 6.2 6.3 6.2 6.2 6.3 6.3 6.3 6.6 6.7 6.3 6.4 6.7 6.4 6.7 6.9 6.7 6.8 6.7 6.8 6.6 6.7 6.5 6.7 6.9 6.4 6.3 6.5 6.4 6.2 6.3 6.5 6.5 6.5 6.0 6.1 6.2 6.3 6.3 6.8 6.7 6.9 6.2 5.8 6.1 6.2 6.5 6.9 6.7 6.6 6.3 6.3 6.6 6.4 6.3 6.5 6.5 6.3 5.9 6.3 6.0 6.5 6.6 6.7 6.6 6.3 6.2
GAMAPQ < 3 6.4 6.9 6.4 6.4 6.3 6.3 6.3 5.8 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.2 6.2 6.1 6.1 6.2 6.1 6.2 6.2 6.2 6.2 6.2 6.3 6.3 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.3 6.2 6.3 6.3 6.2 6.2 6.2 6.3 6.3 6.3 6.3 6.3 6.2 6.2 6.2 6.2 6.3 6.3 6.3 6.3 6.2 6.2 6.2 6.2 6.1 6.1 6.1 6.1 6.1 6.2 6.2 6.1 6.2 6.2 6.1 6.1 6.1
GAUnmapped 55.5 3.2 2.9 3.0 3.0 55.4 3.0 2.8 55.1 2.8 2.8 3.1 2.8 2.9 2.8 2.9 2.8 2.8 3.1 2.9 3.1 3.3 54.5 2.8 2.8 3.0 2.9 2.8 3.7 54.3 3.4 54.1 2.8 2.7 2.6 2.7 2.8 2.8 2.7 2.9 3.3 52.7 2.9 2.5 2.6 2.6 2.6 2.8 3.9 2.8 2.5 2.9 2.4 2.5 2.9 2.4 2.5 2.4 2.4 2.5 2.5 2.9 2.5 2.6 3.1 45.9 6.4 2.9 2.7 2.7 2.9 3.0 3.8 4.8
GCMAPQ >= 30 7.5 8.2 7.7 7.9 8.5 8.0 8.8 8.3 8.6 8.7 8.7 8.7 8.8 8.8 8.7 8.8 8.8 8.7 8.8 8.8 8.8 8.8 8.8 8.8 8.8 8.8 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.8 8.8 8.8 8.8 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 8.9 9.0 8.9 8.9 8.9 8.9 8.9 8.9 9.0 9.0 8.9 9.0 9.0 8.9 8.9 9.0 8.9 9.0 9.0 9.0 9.0 9.0 9.0 8.9
GCMAPQ >= 20 8.3 9.4 8.7 9.0 9.9 9.1 10.1 9.7 9.8 10.1 10.2 10.1 10.2 10.3 10.1 10.2 10.3 10.2 10.3 10.3 10.4 10.4 10.4 10.3 10.3 10.4 10.5 10.4 10.4 10.4 10.5 10.5 10.5 10.4 10.5 10.4 10.5 10.4 10.5 10.5 10.5 10.5 10.5 10.4 10.4 10.5 10.3 10.4 10.4 10.3 10.4 10.5 10.4 10.1 10.4 10.3 10.2 10.1 10.2 10.0 10.1 10.3 9.8 9.7 9.5 9.7 9.5 9.5 9.4 9.3 9.4 9.2 9.3 9.2
GCMAPQ >= 10 6.6 6.6 6.4 6.4 6.8 6.5 7.1 6.7 6.7 7.0 7.0 6.9 7.2 7.2 7.2 7.0 7.2 7.1 7.1 7.4 7.5 7.3 7.2 7.4 7.1 7.5 7.3 7.5 7.5 7.3 7.6 7.8 7.4 7.6 7.4 7.6 7.5 7.6 7.6 7.5 7.6 7.6 7.5 7.6 7.5 7.7 7.5 7.6 7.3 7.3 7.4 7.7 7.3 7.3 7.7 7.5 7.5 7.4 7.6 7.6 7.7 7.6 7.6 7.3 7.5 7.4 7.6 7.7 7.4 7.7 7.5 7.5 7.5 7.6
GCMAPQ >= 3 6.5 6.5 6.4 6.1 6.5 6.2 7.0 6.6 6.3 6.3 6.2 6.4 6.4 6.6 6.6 6.7 6.5 6.4 6.7 6.9 6.9 6.9 6.8 7.0 6.9 6.6 6.5 6.3 6.7 6.6 6.9 7.1 7.1 7.3 6.9 7.1 7.1 7.1 7.0 7.0 7.3 6.9 6.9 7.1 7.0 7.0 6.5 6.6 6.8 7.0 7.0 7.2 6.8 6.7 7.3 7.0 7.2 6.8 7.1 7.0 6.9 7.3 7.2 7.0 7.1 7.1 7.4 7.5 7.3 7.4 7.7 7.4 7.3 7.3
GCMAPQ < 3 7.3 7.8 7.4 7.5 8.0 7.7 8.3 7.9 8.1 8.2 8.2 8.3 8.3 8.3 8.3 8.2 8.3 8.2 8.3 8.3 8.3 8.3 8.3 8.3 8.2 8.3 8.3 8.3 8.4 8.4 8.4 8.4 8.3 8.3 8.3 8.3 8.3 8.4 8.4 8.4 8.4 8.4 8.3 8.4 8.4 8.4 8.4 8.4 8.4 8.5 8.4 8.5 8.4 8.4 8.5 8.4 8.5 8.4 8.5 8.5 8.5 8.6 8.5 8.5 8.5 8.6 8.6 8.6 8.6 8.6 8.6 8.6 8.6 8.5
GCUnmapped 3.7 4.1 3.8 3.9 4.3 4.0 4.4 4.6 4.3 4.6 56.7 4.4 4.4 4.5 4.5 4.8 4.6 4.9 56.5 4.6 4.6 4.5 4.6 4.5 4.6 5.1 56.2 4.6 4.5 4.6 4.7 4.6 4.6 4.6 4.5 5.2 56.0 4.7 5.3 55.4 4.5 4.8 4.4 4.7 4.3 4.4 4.4 4.7 4.3 4.3 5.0 54.7 4.5 4.0 4.9 6.5 4.3 4.1 4.2 4.3 4.6 53.4 3.9 3.8 3.8 4.7 3.9 3.9 3.9 3.8 3.9 4.2 4.1 4.3
GGMAPQ >= 30 10.7 10.4 9.5 9.1 9.4 9.5 9.3 9.0 9.3 9.3 9.3 9.4 9.4 9.5 9.6 9.7 9.8 9.8 9.8 9.8 9.9 9.8 9.8 9.9 9.9 9.9 9.9 9.9 9.9 9.9 10.0 9.9 9.9 9.9 9.9 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.0 10.1 10.1 10.1 10.1 10.1 10.2 10.2 10.2 10.2 10.3 10.3 10.3 10.3 10.4 10.4 10.4 10.4 10.4 10.5 10.6 10.6 10.6 10.7 10.7 10.8 10.8 10.9 10.9 11.0
GGMAPQ >= 20 12.6 12.0 11.0 10.9 11.1 11.3 11.2 10.8 11.3 11.5 11.4 11.3 11.5 11.7 11.8 12.0 12.1 12.3 12.5 12.6 12.8 12.9 13.0 13.3 13.3 13.5 13.3 13.1 13.3 13.3 13.6 13.4 13.3 13.5 13.5 13.7 13.7 13.7 13.9 14.0 14.1 14.1 14.0 14.2 14.4 14.5 14.8 14.9 14.8 15.0 15.4 15.4 15.4 15.9 16.0 16.0 16.1 16.3 16.5 16.8 17.2 17.1 17.2 17.5 17.9 17.9 17.7 17.7 17.7 17.7 17.5 17.5 17.3 17.2
GGMAPQ >= 10 9.1 8.8 8.3 7.7 8.2 8.6 7.9 7.5 8.2 8.3 7.9 7.8 7.8 7.9 8.1 8.1 8.1 8.4 8.5 8.7 8.7 8.5 8.5 8.8 8.8 9.0 8.7 8.7 8.8 9.0 9.1 8.7 8.7 8.9 8.7 8.6 8.7 8.5 8.5 8.7 8.7 8.5 8.3 8.3 8.7 8.4 8.6 8.4 8.4 8.3 8.7 8.6 8.6 8.6 8.7 8.6 8.5 8.4 8.6 8.5 8.6 8.3 8.3 8.4 8.5 8.4 8.3 8.5 8.6 8.7 8.6 8.8 8.8 8.8
GGMAPQ >= 3 9.2 8.5 7.9 7.3 7.6 8.2 7.3 6.7 7.4 7.3 7.3 6.9 7.3 7.5 7.7 7.6 7.6 7.8 8.4 8.2 8.4 8.4 8.5 9.0 9.1 9.0 8.6 9.0 8.9 9.1 9.4 8.7 8.6 8.5 8.1 8.0 8.1 8.0 8.1 8.4 8.0 7.6 7.6 7.9 8.3 8.0 8.4 8.2 7.9 7.9 8.3 8.1 8.1 8.5 8.7 8.2 8.3 8.2 8.3 8.2 8.3 8.2 7.9 8.0 8.2 8.2 7.9 8.3 8.3 8.3 8.2 8.2 8.4 8.4
GGMAPQ < 3 10.4 9.9 9.1 8.7 9.1 9.2 8.9 8.5 9.0 9.0 8.9 8.9 9.0 9.1 9.2 9.3 9.3 9.5 9.6 9.5 9.5 9.5 9.5 9.7 9.7 9.7 9.6 9.6 9.6 9.7 9.8 9.6 9.5 9.6 9.6 9.6 9.7 9.6 9.6 9.6 9.6 9.6 9.5 9.6 9.6 9.6 9.7 9.7 9.7 9.7 9.8 9.8 9.8 9.8 9.8 9.8 9.9 9.8 9.9 10.0 10.0 10.0 10.0 10.0 10.1 10.2 10.2 10.2 10.3 10.4 10.4 10.4 10.5 10.6
GGUnmapped 5.4 5.2 4.4 4.5 57.0 4.7 4.7 4.5 4.8 4.9 5.1 5.1 57.1 5.2 5.1 5.3 5.3 5.6 5.8 6.0 6.6 58.1 6.5 6.6 6.9 6.8 6.7 6.7 6.8 7.0 7.1 7.1 7.2 7.0 7.8 58.6 7.4 7.2 7.4 7.7 7.8 8.6 7.6 7.6 7.7 7.7 8.0 9.3 7.9 8.0 8.4 8.4 8.1 8.5 10.8 8.5 8.2 8.3 8.3 8.3 8.6 8.7 8.3 8.3 8.5 11.9 8.4 8.2 8.1 8.1 8.1 8.2 8.4 8.9
GTMAPQ >= 30 5.3 4.9 4.5 4.7 4.7 4.6 4.9 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.6 4.5 4.6 4.5 4.5 4.6 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.4 4.4 4.4 4.4 4.4 4.4 4.4
GTMAPQ >= 20 5.4 4.9 4.4 4.7 4.7 4.6 4.9 4.7 4.6 4.7 4.6 4.5 4.4 4.5 4.5 4.5 4.5 4.5 4.5 4.5 4.4 4.4 4.3 4.3 4.5 4.3 4.5 4.4 4.4 4.3 4.4 4.5 4.4 4.4 4.3 4.3 4.4 4.3 4.2 4.3 4.3 4.3 4.3 4.2 4.2 4.1 4.1 4.1 4.1 4.1 3.9 4.0 4.0 3.9 4.1 3.9 4.0 3.9 3.8 3.8 3.7 3.8 3.8 3.8 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.7 3.8 3.7
GTMAPQ >= 10 6.0 5.4 5.1 5.4 5.3 5.1 5.5 5.3 5.3 5.4 5.3 5.4 5.0 5.1 5.1 5.2 5.1 5.2 5.1 5.1 5.1 5.0 5.0 4.9 5.1 5.0 5.1 4.9 4.9 4.9 4.9 4.9 5.0 5.0 5.1 5.0 4.9 5.0 4.8 4.9 5.0 4.9 5.0 5.0 4.8 4.9 4.7 4.8 4.7 4.8 4.7 4.8 4.9 4.8 4.8 4.8 4.7 4.6 4.5 4.5 4.3 4.5 4.4 4.6 4.6 4.6 4.5 4.5 4.7 4.7 4.6 4.4 4.7 4.5
GTMAPQ >= 3 6.3 5.9 5.6 5.8 5.6 5.3 5.9 5.7 5.8 5.5 5.7 5.6 5.2 5.7 5.5 5.4 5.3 5.4 5.1 5.1 5.1 5.2 5.0 5.3 5.4 5.3 5.5 5.2 5.3 5.5 5.2 5.5 5.4 5.5 5.4 5.4 5.3 5.2 5.2 5.1 5.6 5.6 5.3 5.3 5.2 5.2 5.1 5.3 5.3 5.3 5.1 5.0 5.3 5.1 5.2 5.3 4.8 5.0 4.7 4.6 4.7 5.1 5.0 5.0 4.9 5.0 4.9 5.0 5.2 5.0 5.1 4.9 5.0 4.8
GTMAPQ < 3 5.5 5.0 4.6 4.9 4.9 4.7 5.0 4.8 4.7 4.9 4.7 4.8 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.8 4.7 4.8 4.7 4.7 4.7 4.8 4.8 4.8 4.8 4.7 4.7 4.7 4.8 4.7 4.7 4.7 4.7 4.7 4.7 4.7 4.6 4.6 4.7 4.6 4.7 4.6 4.6 4.7 4.6 4.7 4.6 4.6 4.6 4.5 4.5 4.5 4.5 4.5 4.5 4.4 4.5 4.4 4.5 4.5 4.5 4.5 4.4 4.5 4.4
GTUnmapped 2.8 2.5 2.4 2.3 2.3 2.2 2.3 2.3 2.2 2.3 2.3 2.2 2.5 54.1 2.4 2.2 2.2 2.1 2.2 2.1 2.1 2.1 2.1 2.0 2.1 2.0 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.3 2.1 2.1 2.1 2.0 2.0 2.1 2.0 2.2 2.8 2.0 2.2 2.1 2.7 51.1 2.0 2.1 1.9 2.1 2.0 2.6 49.5 2.0 2.1 2.2 1.8 2.0 1.8 2.0 2.4 2.2 1.9 3.3 1.9 2.1 1.9 1.9 1.9 1.9 2.1 2.3
TAMAPQ >= 30 2.8 3.3 3.3 3.4 3.2 3.1 3.0 3.0 3.1 3.0 3.0 3.0 3.0 3.0 3.0 3.0 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.9 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.8
TAMAPQ >= 20 2.3 2.7 2.7 2.7 2.5 2.4 2.4 2.4 2.4 2.3 2.3 2.3 2.3 2.3 2.3 2.3 2.3 2.3 2.2 2.2 2.2 2.3 2.2 2.2 2.2 2.2 2.1 2.2 2.2 2.1 2.2 2.1 2.1 2.1 2.2 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.0 2.1 2.1 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 1.9 2.0 1.9 2.0 1.9 2.0 1.9 2.0 2.0 2.0 2.0 1.9 2.0
TAMAPQ >= 10 3.2 3.9 3.8 4.0 3.6 3.7 3.4 3.4 3.5 3.4 3.4 3.4 3.4 3.5 3.5 3.5 3.3 3.3 3.2 3.3 3.1 3.4 3.2 3.1 3.3 3.2 3.1 3.0 3.0 2.9 3.1 3.0 2.9 3.0 3.0 3.0 2.9 2.8 2.9 3.0 3.0 2.9 2.9 2.9 3.1 3.0 3.0 3.1 3.0 3.1 3.2 3.0 3.1 3.1 3.0 3.0 3.0 3.1 3.1 3.2 3.2 3.1 3.2 3.0 3.2 3.2 3.2 3.2 3.0 3.2 3.1 3.0 3.0 3.0
TAMAPQ >= 3 3.6 4.1 4.3 4.6 4.3 4.3 3.9 3.9 3.9 3.9 3.7 3.9 4.1 4.0 3.9 4.3 3.7 3.7 3.8 3.7 3.5 3.8 3.6 3.4 3.4 3.5 3.0 3.1 3.1 3.2 3.3 3.1 3.1 3.0 3.2 3.4 2.9 2.9 3.2 3.2 3.2 3.2 3.1 3.3 3.4 3.2 3.2 3.2 3.3 3.5 3.6 3.6 3.3 3.3 3.1 3.3 3.5 3.5 3.7 3.8 3.7 3.7 3.6 3.5 3.5 3.7 3.8 3.5 3.5 3.9 3.5 3.4 3.3 3.4
TAMAPQ < 3 2.6 3.2 3.2 3.3 3.1 3.0 2.9 2.9 2.9 2.9 2.8 2.8 2.9 2.9 2.9 2.9 2.8 2.8 2.8 2.8 2.8 2.8 2.8 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.7 2.7 2.7 2.6 2.6 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.7 2.6 2.6 2.6 2.6
TAUnmapped 1.5 1.8 1.9 1.8 1.7 1.6 1.6 1.6 1.6 1.6 1.6 1.6 1.6 1.6 1.6 1.6 1.6 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.4 1.4 1.4 1.5 1.4 1.5 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.5 1.4 1.5 1.5 2.1 50.3 1.5 1.4 1.4 1.4 1.4 1.4 1.5 1.3 1.4 1.5 1.3 1.4 1.4 1.3 1.4 1.5 2.5 2.9 1.7 1.8 1.5 1.6 1.6 2.1 2.7
TCMAPQ >= 30 3.7 6.1 6.2 6.1 6.4 6.0 6.4 6.3 6.3 6.2 6.3 6.2 6.2 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.0 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0
TCMAPQ >= 20 3.5 5.9 6.0 5.9 6.2 5.6 6.0 6.0 6.0 5.8 5.9 5.8 5.8 5.7 5.7 5.7 5.7 5.6 5.6 5.6 5.6 5.5 5.6 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.4 5.4 5.5 5.5 5.5 5.5 5.4 5.5 5.4 5.4 5.5 5.5 5.5 5.5 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.3 5.3 5.2 5.2 5.3 5.1 5.3 5.3 5.1 5.2 5.1 5.0 5.1 5.1 5.0 5.0 5.0 4.9 4.9 5.0 4.9 5.0 5.1
TCMAPQ >= 10 3.9 6.4 6.5 6.6 6.9 6.3 6.9 7.0 7.1 6.6 6.9 6.8 7.0 6.7 6.9 6.9 6.6 6.9 6.8 6.8 6.7 6.6 6.5 6.5 6.7 6.6 6.7 6.7 6.7 6.5 6.3 6.4 6.5 6.8 6.5 6.8 6.5 6.6 6.5 6.5 6.7 6.8 7.0 7.0 7.0 6.8 6.8 7.0 6.8 6.7 6.8 6.9 6.9 6.7 6.7 6.6 6.7 6.9 7.0 6.4 6.6 6.4 6.3 6.5 6.6 6.5 6.5 6.4 6.2 6.3 6.1 6.2 6.2 6.2
TCMAPQ >= 3 3.9 6.4 6.8 7.1 7.0 6.4 7.1 6.9 7.0 6.8 7.2 6.9 7.2 6.5 6.8 6.7 6.6 6.8 6.9 6.8 6.9 6.6 6.4 6.4 6.5 6.8 7.0 7.2 7.1 6.5 6.3 6.2 6.3 6.8 6.6 6.8 6.7 6.8 6.8 6.5 6.8 6.7 7.5 7.2 6.9 6.7 7.2 6.9 6.8 6.9 7.0 7.0 6.9 7.2 6.5 7.0 7.0 7.0 7.4 6.9 6.4 6.3 6.2 6.4 6.4 6.3 6.2 5.8 5.9 5.6 5.3 5.8 5.8 5.8
TCMAPQ < 3 3.8 6.5 6.5 6.5 6.7 6.3 6.7 6.7 6.7 6.5 6.6 6.5 6.6 6.5 6.4 6.5 6.5 6.4 6.4 6.5 6.4 6.4 6.4 6.5 6.5 6.5 6.4 6.5 6.5 6.4 6.3 6.4 6.4 6.5 6.5 6.5 6.4 6.4 6.4 6.4 6.4 6.4 6.5 6.5 6.4 6.4 6.4 6.4 6.3 6.4 6.3 6.4 6.4 6.4 6.3 6.4 6.4 6.4 6.4 6.3 6.3 6.3 6.2 6.3 6.3 6.2 6.2 6.2 6.2 6.2 6.1 6.1 6.1 6.2
TCUnmapped 1.5 2.7 55.2 2.7 3.1 2.6 2.8 2.8 2.7 2.6 2.6 2.6 2.7 2.6 2.9 54.5 2.5 2.6 2.5 2.5 2.4 2.4 2.7 2.4 2.4 2.4 2.4 2.4 2.4 2.3 2.4 2.3 2.4 2.4 2.5 2.6 2.4 2.4 2.3 2.4 2.4 2.4 3.1 52.8 3.1 53.2 2.4 2.3 2.4 2.2 2.3 2.5 2.4 2.3 2.9 49.7 2.4 3.0 52.9 2.3 2.5 3.2 2.2 2.5 2.5 2.5 2.2 2.2 2.2 2.2 2.3 2.3 2.4 2.7
TGMAPQ >= 30 4.7 6.1 6.1 6.5 6.3 6.2 5.9 6.3 6.3 6.1 6.1 6.1 6.1 6.1 6.2 6.2 6.2 6.2 6.2 6.2 6.1 6.1 6.2 6.1 6.1 6.2 6.1 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.2 6.1 6.2 6.1 6.1 6.2 6.2 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0
TGMAPQ >= 20 4.8 6.3 6.5 6.7 6.5 6.5 6.2 6.5 6.5 6.3 6.3 6.3 6.4 6.3 6.3 6.4 6.3 6.4 6.4 6.4 6.3 6.3 6.3 6.2 6.2 6.3 6.2 6.3 6.3 6.3 6.3 6.2 6.3 6.3 6.3 6.2 6.2 6.2 6.2 6.2 6.1 6.1 6.1 6.1 6.0 6.1 5.9 6.0 5.9 5.8 5.9 5.8 5.8 5.9 5.7 5.8 5.6 5.7 5.7 5.5 5.5 5.4 5.4 5.5 5.4 5.3 5.3 5.3 5.2 5.2 5.1 5.1 5.1 5.1
TGMAPQ >= 10 5.6 7.1 7.3 7.6 7.4 7.3 6.8 7.6 7.3 7.0 7.0 7.0 7.5 7.2 7.0 7.4 7.5 7.2 7.3 7.3 7.1 7.5 7.4 7.2 7.2 7.1 7.3 7.3 7.2 7.2 7.2 7.1 7.3 7.3 7.3 7.3 7.3 7.3 7.5 7.4 7.2 7.2 7.3 7.3 7.1 7.1 7.2 7.1 6.9 6.8 7.1 7.0 6.9 7.3 7.2 7.0 6.9 7.1 6.9 6.9 6.6 6.9 6.9 7.0 6.9 7.0 7.0 6.7 7.0 7.0 7.0 7.0 6.9 6.9
TGMAPQ >= 3 5.5 7.1 7.3 7.6 7.4 7.4 6.9 7.8 7.1 7.1 6.9 6.9 7.5 7.1 7.0 7.3 7.1 7.2 7.1 7.1 6.9 7.3 7.1 7.1 7.2 7.2 7.3 7.8 7.4 7.6 7.4 7.1 7.4 7.5 7.5 7.4 7.4 7.5 7.7 7.8 7.6 7.6 8.0 7.6 7.1 7.3 7.0 7.2 7.0 6.9 7.0 7.2 7.2 7.8 7.1 7.1 7.0 7.0 7.2 6.9 6.9 7.2 7.5 7.5 7.3 7.4 7.4 7.6 7.8 7.5 7.5 7.3 7.2 7.1
TGMAPQ < 3 5.1 6.5 6.6 6.9 6.7 6.7 6.3 6.8 6.8 6.5 6.5 6.5 6.7 6.6 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.7 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.7 6.7 6.7 6.6 6.6 6.7 6.7 6.7 6.6 6.5 6.7 6.6 6.6 6.6 6.6 6.6 6.6 6.5 6.6 6.6 6.6 6.6 6.5 6.6 6.5 6.5 6.5 6.4 6.4 6.4 6.5 6.5 6.5 6.5 6.5 6.4 6.5 6.5 6.4 6.4 6.4 6.4
TGUnmapped 2.2 2.9 3.0 3.1 3.0 3.0 2.8 3.0 3.0 3.0 2.9 3.0 2.9 3.0 3.2 2.9 2.9 3.0 2.9 2.9 2.9 2.9 2.9 2.9 3.3 54.4 2.9 2.8 2.8 2.8 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.7 2.6 2.6 2.7 2.6 2.9 2.7 2.6 2.8 3.3 53.1 2.6 2.5 2.5 2.4 2.6 2.5 2.6 2.7 3.1 51.8 2.6 2.4 3.2 51.4 2.9 2.4 2.3 2.3 2.3 2.6 2.4 2.6 3.0
TTMAPQ >= 30 3.9 5.7 5.9 5.7 5.6 5.6 5.7 5.8 5.7 5.6 5.6 5.5 5.5 5.4 5.3 5.2 5.2 5.1 5.1 5.1 5.1 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0
TTMAPQ >= 20 3.5 5.1 5.2 5.0 4.8 4.8 4.9 4.8 4.7 4.7 4.6 4.6 4.6 4.5 4.4 4.3 4.3 4.2 4.2 4.2 4.2 4.2 4.2 4.1 4.1 4.1 4.1 4.1 4.1 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 3.9 4.0 4.0 4.1 4.0 4.0 4.0 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.1 4.2 4.2 4.2 4.3 4.2 4.2 4.3 4.3 4.3 4.4 4.4 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3
TTMAPQ >= 10 5.7 7.6 7.7 7.5 7.2 7.1 7.1 6.9 6.7 6.6 6.6 6.8 6.8 6.6 6.5 6.2 6.1 6.0 6.1 5.8 6.0 5.9 6.0 5.9 5.8 5.8 5.8 5.8 5.7 5.7 5.6 5.7 5.6 5.6 5.7 5.7 5.6 5.6 5.5 5.4 5.5 5.6 5.6 5.5 5.5 5.3 5.4 5.3 5.2 5.2 5.4 5.5 5.5 5.4 5.3 5.4 5.6 5.6 5.5 5.5 5.6 5.6 5.7 5.8 5.7 5.7 5.7 5.7 5.6 5.7 5.7 5.6 5.7 5.9
TTMAPQ >= 3 6.0 8.2 8.5 8.4 8.0 7.9 7.7 7.4 7.2 7.3 7.3 7.6 7.4 7.0 7.0 6.8 6.7 6.7 6.8 6.4 6.3 6.1 6.1 6.0 6.1 6.2 6.2 6.1 5.8 5.4 5.5 5.7 6.0 6.1 6.2 6.0 6.1 6.0 5.8 5.7 5.8 6.2 6.1 5.8 5.8 5.5 5.5 5.2 5.2 5.5 5.5 5.6 5.6 5.5 5.6 5.6 5.7 5.8 5.8 5.6 5.7 5.7 5.6 5.6 5.8 5.7 5.7 5.4 5.3 5.3 5.4 5.5 5.7 6.0
TTMAPQ < 3 4.3 6.2 6.3 6.1 5.9 5.9 6.0 6.0 5.9 5.8 5.8 5.8 5.8 5.6 5.5 5.4 5.4 5.4 5.3 5.3 5.4 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.1 5.1 5.1 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.1 5.0 5.0 5.0 5.0 5.1 5.1 5.1 5.0 5.0 5.0 5.0 4.9 5.0 5.0 5.0 5.0
TTUnmapped 1.7 2.8 2.9 3.1 2.8 2.8 2.9 2.9 2.9 2.8 2.8 2.9 2.8 3.1 54.6 2.8 2.8 2.7 2.7 2.7 2.7 2.7 2.8 2.7 2.7 2.8 2.7 2.7 2.7 2.7 2.6 2.7 2.6 2.6 2.9 2.6 2.6 2.6 2.6 2.6 2.6 2.7 2.8 2.8 2.7 2.8 2.7 2.7 2.8 2.8 2.9 2.6 2.7 2.6 2.8 2.9 3.6 53.1 3.2 3.0 3.6 2.7 3.5 52.9 4.5 2.8 2.6 2.6 2.5 2.5 2.6 2.6 2.9 3.1
Percentage of 2-mers at each position of the read for each alignment quality interval. Numbers shown in bold corresponds to p-values of <= 1e-100.

Error Distribution

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3

Nucleotide Composition MAPQ >= 30

A C G T N

Nucleotide Composition MAPQ >= 20

A C G T N

Nucleotide Composition MAPQ >= 10

A C G T N

Nucleotide Composition MAPQ >= 3

A C G T N

Nucleotide Composition MAPQ < 3

A C G T N

Nucleotide Composition Unmapped

A C G T N

Length Distribution MAPQ >= 30

Length Distribution MAPQ >= 20

Length Distribution MAPQ >= 10

Length Distribution MAPQ >= 3

Length Distribution MAPQ < 3

Length Distribution Unmapped

Top 5 over-represented 2-mers MAPQ >= 30

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

CC

AG

CT

GC

GG

CC

GC

AG

CT

CC

GG

GC

CT

AG

GG

CC

GC

AG

CT

CC

GG

GC

AG

CT

CC

GG

GC

AG

CT

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

AG

CC

GG

GC

CT

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CC

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CC

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GC

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CC

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AG

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CC

GC

CT

AG

GG

CC

GC

CT

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 20

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

AG

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CT

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GA

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CT

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CC

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AG

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CC

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CG

AG

GG

CC

GC

CG

AG

GG

CC

GC

CG

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 10

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AG

GG

CA

CT

CC

GG

AG

TT

CC

TG

GG

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CT

TG

AG

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AG

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TT

CT

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CA

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AG

GG

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CT

AA

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TG

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GC

CA

CC

GG

GC

CA

TG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ < 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

AG

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GC

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CT

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers Unmapped

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GA

GG

AG

CC

GC

AT

GG

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CC

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TC

GG

GC

CC

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CG

GG

GC

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GT

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TC

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AG

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GA

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AA

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AT

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TG

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AG

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GA

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AC

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AT

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TC

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CT

GG

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TC

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CC

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CC

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TT

GT

GG

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CG

TA

GG

CC

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GA

AT

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CC

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CG

TG

GG

GC

CC

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GA

CC

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GT

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CG

TC

GG

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CT

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TC

GG

CC

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CT

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TG

GG

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GC

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TC

CT

GG

CC

GC

CG

TT

GG

CC

GC

CG

TG

GG

CC

TT

GC

GA

GG

CC

GC

AA

AA

GG

GA

CC

GC

AA

GG

CC

GC

CG

AA

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CG

AA

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CC

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CG

AA

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CC

GC

CG

AA

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CC

AG

GC

AA

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CC

AG

AC

AA

GG

AG

CC

AC

 
Top 5 enriched 2-mers at each positon withion reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 20 over-represented 10-mers

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3 Unmapped
SeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-value
CCGCCGCCGC 578992 0.0e+00 GGGGGGGGGG 105837 0.0e+00 GGAGGCTGAG 15026 0.0e+00 CTCCTGACCT 4479 0.0e+00 AAAAAAAAAA 40356 0.0e+00 TCAGCAGGAA 6318904 0.0e+00
CGCCGCCGCC 566783 0.0e+00 GGCGGGGGGG 58300 0.0e+00 GAGGCTGAGG 14808 0.0e+00 TCCTGACCTC 4131 0.0e+00 TTCCATTCCA 33102 0.0e+00 GATCGGAAGA 6308532 0.0e+00
GCCGCCGCCG 514553 0.0e+00 GCGGGGGGGG 47298 0.0e+00 CCTCAGCCTC 14305 0.0e+00 CCTCAGCCTC 3181 0.0e+00 ATTCCATTCC 32912 0.0e+00 GGAAGAGCGG 6307219 0.0e+00
CCTGTAATCC 262058 0.0e+00 TTTTTTTTTT 46080 0.0e+00 AGGCTGAGGC 14260 0.0e+00 GAGGCTGAGG 3145 0.0e+00 CTCCTGACCT 32861 0.0e+00 CGGAAGAGCG 6304909 0.0e+00
GTAATCCCAG 249790 0.0e+00 AAAAAAAAAA 44444 0.0e+00 CTCAGCCTCC 14240 0.0e+00 CTCAGCCTCC 3127 0.0e+00 TGGAATGGAA 32376 0.0e+00 ATCGGAAGAG 6304686 0.0e+00
GGAGGCTGAG 233385 0.0e+00 CGGGGGGGGG 39885 0.0e+00 GGCTGAGGCA 14000 0.0e+00 GGAGGCTGAG 3122 0.0e+00 GGAATGGAAT 32304 0.0e+00 CAGCAGGAAT 6304062 0.0e+00
GAGGCTGAGG 231354 0.0e+00 GCGGCGGCGG 35153 0.0e+00 GCCTCAGCCT 13763 0.0e+00 GCCTCAGCCT 3099 0.0e+00 TCCATTCCAT 32276 0.0e+00 AGCAGGAATG 6298848 0.0e+00
CCTCCTCCTC 223483 0.0e+00 GGGGCGGGGG 34711 0.0e+00 GCTGAGGCAG 13723 0.0e+00 AGGCTGAGGC 3072 0.0e+00 CCATTCCATT 32050 0.0e+00 TCGGAAGAGC 6297554 0.0e+00
CTCCTCCTCC 220945 0.0e+00 GCGGCGGGGG 31000 0.0e+00 TCCCAGCTAC 13693 0.0e+00 GGCTGAGGCA 3014 0.0e+00 ATGGAATGGA 31740 0.0e+00 GTTCAGCAGG 6292937 0.0e+00
CCAGGCTGGA 213044 0.0e+00 GGCGGCGGCG 30751 0.0e+00 CCCAGCTACT 13615 0.0e+00 CTGAGGCAGG 3009 0.0e+00 CATTCCATTC 31485 0.0e+00 GGTTCAGCAG 6292470 0.0e+00
GAGGAGGAGG 211772 0.0e+00 CGGCGGGGGG 29986 0.0e+00 CTCCTGACCT 13583 0.0e+00 GCTGAGGCAG 2983 0.0e+00 AATGGAATGG 31434 0.0e+00 GCAGGAATGC 6290786 0.0e+00
CTCAGCCTCC 208367 0.0e+00 GGGCGGGGGG 28322 0.0e+00 GCTCACTGCA 13372 0.0e+00 TTTTAGTAGA 2973 0.0e+00 GAATGGAATG 30762 0.0e+00 TTCAGCAGGA 6287893 0.0e+00
GCCCAGGCTG 206162 0.0e+00 CGGCGGCGGC 26418 0.0e+00 CTCACTGCAA 13283 0.0e+00 GCCTCCCAAA 2945 0.0e+00 TCCTGACCTC 29868 0.0e+00 CGGTTCAGCA 6284623 0.0e+00
GGGATTACAG 205831 0.0e+00 CCCCCCCCCC 26295 0.0e+00 CTGAGGCAGG 13249 0.0e+00 TCCCAGCTAC 2929 0.0e+00 GATTCCATTC 28246 0.0e+00 CAGGAATGCC 6281505 0.0e+00
GGAGGAGGAG 201671 0.0e+00 GGGGGGGGGC 26095 0.0e+00 TAATCCCAGC 13153 0.0e+00 TTTAGTAGAG 2928 0.0e+00 GAGGCTGAGG 28102 0.0e+00 AGGAATGCCG 6280137 0.0e+00
AGGCTGGAGT 195129 0.0e+00 GGGGGCGGGG 25600 0.0e+00 TCCTGACCTC 12688 0.0e+00 TTTTTAGTAG 2924 0.0e+00 GGAGGCTGAG 27962 0.0e+00 GAAGAGCGGT 6273359 0.0e+00
CCCCCTCCCC 178015 0.0e+00 GGCGGCGGGG 22686 0.0e+00 GTAATCCCAG 12607 0.0e+00 CCCAGCTACT 2918 0.0e+00 GAATGGAATC 27588 0.0e+00 GGAATGCCGA 6267337 0.0e+00
TCCTCCTCCT 176941 0.0e+00 ACACACACAC 21843 0.0e+00 TGCCTCAGCC 12557 0.0e+00 TTAGTAGAGA 2895 0.0e+00 ACACACACAC 27347 0.0e+00 AGAGCGGTTC 6267126 0.0e+00
CCCCCGCCCC 174482 0.0e+00 GAGGCTGAGG 21717 0.0e+00 CTGCCTCAGC 12505 0.0e+00 TTCTCCTGCC 2859 0.0e+00 CACACACACA 26941 0.0e+00 AAGAGCGGTT 6266518 0.0e+00
GGGAGGCTGA 174246 0.0e+00 CACACACACA 21243 0.0e+00 ATTCTCCTGC 12483 0.0e+00 CCTCCCAAAG 2834 0.0e+00 GCTCACTGCA 26663 0.0e+00 AGCGGTTCAG 6260758 0.0e+00