ezh2_wt_k36

Mapping stats: 96% aligned (101.3M aligned out of 105.6M total) 

Number of alignments in various mapping quality (MAPQ) intervals and number of unmapped sequences. The percentage and number of alignments in each category is given in brackets.

Mean Base Quality

Mean base quality of reads with low and high mapping quality.

Error Profile MAPQ >= 30

Mismatches Insertions Deletions

Error Profile MAPQ >= 20

Mismatches Insertions Deletions

Error Profile MAPQ >= 10

Mismatches Insertions Deletions

Error Profile MAPQ >= 3

Mismatches Insertions Deletions

Error Profile MAPQ < 3

Mismatches Insertions Deletions

Nucleotide Over-representation along read

Mer Q 1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
AAMAPQ >= 30 9.6 9.3 8.7 8.5 8.7 8.6 8.6 8.4 8.4 8.6 8.5 8.4 8.4 8.3 8.2 8.1 8.0 7.9 7.9 7.9 7.9 7.9 8.0 8.0 8.0 8.0 7.9 7.9 7.9 7.9 7.8 7.8 7.9 7.9 7.9 7.9 7.9 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.7 7.8 7.7 7.7 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.7 7.7 7.8 7.8 7.8
AAMAPQ >= 20 8.7 8.4 7.8 7.5 7.8 7.7 7.8 7.5 7.5 7.8 7.8 7.7 7.5 7.4 7.4 7.4 7.2 7.1 7.1 7.0 7.1 7.1 7.2 7.2 7.3 7.1 7.1 7.1 7.1 7.1 7.2 7.1 7.2 7.2 7.2 7.2 7.3 7.2 7.2 7.1 7.3 7.1 7.1 7.1 7.2 7.3 7.3 7.3 7.3 7.3 7.3 7.5 7.5 7.5 7.6 7.7 7.8 7.7 7.7 7.8 7.8 7.9 7.9 8.0 8.0 7.9 7.9 7.9 7.9 7.9 7.8 7.8 7.8 7.8
AAMAPQ >= 10 7.6 7.4 6.9 6.6 6.9 6.8 6.8 6.5 6.6 6.9 7.0 6.8 6.6 6.5 6.4 6.5 6.3 6.2 6.3 6.2 6.2 6.2 6.3 6.3 6.5 6.3 6.3 6.2 6.1 6.2 6.2 6.1 6.2 6.3 6.2 6.4 6.6 6.5 6.6 6.4 6.7 6.4 6.3 6.4 6.4 6.6 6.7 6.7 6.7 6.8 6.8 6.8 6.8 6.9 7.0 7.0 7.2 7.0 7.1 7.3 7.2 7.4 7.5 7.5 7.5 7.5 7.5 7.6 7.5 7.5 7.6 7.7 7.8 7.8
AAMAPQ >= 3 7.7 7.5 7.0 6.7 6.9 6.8 7.0 6.9 7.2 7.3 7.3 7.2 6.8 6.8 6.6 6.7 6.7 6.3 6.2 6.0 6.0 6.1 6.1 6.0 6.2 6.0 6.0 6.1 6.2 6.4 6.4 6.5 6.6 6.5 6.5 6.6 6.8 6.6 6.6 6.5 6.6 6.4 6.2 6.3 6.4 6.8 7.1 7.1 7.0 7.1 7.1 7.1 7.0 7.2 7.5 7.4 7.5 7.3 7.1 7.4 7.4 7.7 7.9 7.8 7.8 7.7 7.7 7.8 7.8 8.0 8.1 8.0 8.0 8.0
AAMAPQ < 3 8.9 8.7 8.0 7.7 8.0 8.0 8.0 7.8 7.7 8.0 8.1 8.0 7.9 7.7 7.7 7.7 7.5 7.4 7.4 7.4 7.4 7.4 7.4 7.4 7.6 7.5 7.4 7.4 7.4 7.4 7.4 7.4 7.4 7.4 7.4 7.5 7.6 7.5 7.5 7.5 7.5 7.5 7.4 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.7 7.7 7.8 7.9 7.9 7.9 7.8 7.7 7.8 7.8 7.9 8.0 8.0 8.0 8.0 8.0 8.1 8.0 8.0 8.0 8.0 8.0 8.0
AAUnmapped 9.9 9.8 9.1 8.6 9.1 9.4 14.3 9.2 8.9 9.4 9.8 9.8 9.8 9.5 9.7 9.8 9.7 9.5 9.3 9.6 9.8 9.7 9.6 14.2 9.7 9.7 9.6 9.5 9.3 9.6 9.8 9.7 9.5 9.3 9.5 9.5 9.6 9.4 9.1 9.4 9.4 9.4 9.2 9.0 9.1 9.2 9.1 8.9 8.5 8.7 8.8 8.8 8.7 8.5 8.7 8.8 8.8 8.6 8.2 8.3 8.5 8.5 8.3 8.1 8.4 8.5 13.2 13.2 13.0 13.1 13.1 12.8 12.2 11.7
ACMAPQ >= 30 5.4 5.1 5.0 5.0 5.3 5.1 5.2 5.0 5.0 5.1 5.2 5.1 5.2 5.1 5.1 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.2 5.1 5.1 5.2 5.1 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.2 5.1 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.2 5.1 5.1 5.1
ACMAPQ >= 20 5.4 5.0 5.0 5.0 5.2 5.1 5.2 4.9 5.0 5.0 5.2 5.1 5.2 5.2 5.2 5.4 5.3 5.2 5.2 5.2 5.3 5.2 5.1 5.1 5.1 5.2 5.0 5.0 5.1 5.0 5.1 5.2 5.2 5.2 5.1 5.2 5.2 5.2 5.2 5.2 5.3 5.2 5.2 5.1 5.2 5.1 5.1 5.1 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.3 5.3 5.4 5.3 5.3 5.3 5.2 5.3 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.2
ACMAPQ >= 10 5.0 4.7 4.7 4.8 5.1 4.9 5.1 4.7 4.9 4.8 5.0 4.9 5.0 5.0 5.1 5.2 5.1 5.0 4.9 4.9 5.2 5.0 5.0 4.9 5.0 5.0 5.0 4.9 5.0 4.9 5.1 5.2 5.2 5.1 4.9 5.2 5.1 5.1 5.1 5.1 5.2 5.1 5.0 4.9 4.9 4.8 5.0 4.9 5.2 5.2 5.0 5.1 5.0 5.0 5.2 5.0 5.1 5.3 5.4 5.3 5.6 5.4 5.5 5.4 5.4 5.2 5.2 5.1 5.2 5.1 5.2 5.1 5.1 5.3
ACMAPQ >= 3 4.9 4.7 4.6 4.9 5.0 4.8 5.1 4.5 5.1 5.0 5.1 5.1 5.1 5.1 5.2 5.1 5.0 5.0 4.9 4.8 5.2 5.0 5.0 4.9 5.1 5.1 5.0 5.1 5.1 5.1 5.2 5.3 5.2 5.2 4.9 5.2 4.9 5.1 5.1 5.0 5.3 5.1 5.1 4.9 4.9 4.9 5.0 4.9 5.1 5.1 5.1 5.2 5.0 4.8 4.9 4.9 5.0 5.2 5.3 5.2 5.6 5.3 5.3 5.3 5.1 5.2 5.2 5.2 5.2 5.0 5.3 5.2 5.4 5.5
ACMAPQ < 3 5.2 4.9 4.9 4.9 5.1 5.0 5.1 4.9 5.0 5.0 5.0 5.0 5.0 5.1 5.1 5.2 5.1 5.1 5.0 5.0 5.1 5.0 5.1 5.0 5.0 5.1 5.0 5.1 5.1 5.1 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.1 5.2 5.1 5.1 5.0 5.0 5.0 5.1 5.1 5.2 5.2 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.2 5.3 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.2 5.1 5.1 5.2
ACUnmapped 5.3 4.9 4.9 4.7 4.9 4.7 4.9 4.7 4.7 4.6 4.7 4.6 4.6 4.6 4.6 4.8 4.6 4.6 4.5 4.5 4.6 4.5 4.5 4.4 4.4 4.5 4.5 4.6 4.5 4.5 4.6 4.5 9.2 4.4 4.4 4.4 4.4 4.3 4.4 4.3 4.4 4.3 4.4 4.3 4.4 4.3 4.3 4.2 4.3 4.4 4.4 4.3 4.4 4.3 4.3 4.3 4.3 4.4 4.4 4.4 4.4 4.4 4.4 4.3 4.3 4.3 4.4 4.3 4.3 4.3 4.3 4.4 4.4 4.4
AGMAPQ >= 30 8.8 8.0 7.5 7.7 7.7 7.5 7.2 7.2 7.2 7.4 7.4 7.3 7.3 7.4 7.4 7.4 7.4 7.5 7.5 7.5 7.4 7.4 7.5 7.5 7.5 7.5 7.5 7.6 7.6 7.6 7.5 7.5 7.5 7.5 7.5 7.6 7.5 7.5 7.6 7.6 7.6 7.6 7.5 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.5 7.6 7.5 7.5 7.6 7.5 7.5 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6
AGMAPQ >= 20 8.8 7.9 7.4 7.5 7.5 7.3 7.1 7.2 7.2 7.3 7.3 7.1 7.2 7.2 7.2 7.2 7.3 7.4 7.3 7.3 7.4 7.3 7.6 7.4 7.6 7.5 7.5 7.6 7.6 7.7 7.5 7.5 7.6 7.4 7.4 7.5 7.4 7.4 7.4 7.4 7.4 7.4 7.2 7.3 7.3 7.5 7.6 7.4 7.5 7.6 7.5 7.4 7.4 7.4 7.6 7.4 7.3 7.3 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.3 7.2 7.4 7.4 7.3 7.5 7.6 7.4 7.5
AGMAPQ >= 10 8.9 7.8 7.2 7.5 7.5 7.1 6.9 7.2 7.2 7.4 7.4 7.2 7.2 7.2 7.3 7.2 7.3 7.5 7.5 7.4 7.5 7.3 7.9 7.5 7.8 7.6 7.5 7.7 7.6 7.8 7.4 7.5 7.6 7.4 7.2 7.5 7.3 7.2 7.3 7.5 7.4 7.4 7.2 7.5 7.3 7.5 7.5 7.4 7.5 7.6 7.4 7.3 7.5 7.4 7.5 7.3 7.3 7.4 7.3 7.3 7.4 7.3 7.2 7.4 7.2 7.4 7.4 7.6 7.6 7.3 7.6 7.9 7.6 7.5
AGMAPQ >= 3 8.2 7.3 6.6 7.0 7.1 6.8 6.8 6.9 7.3 7.4 7.4 7.2 7.3 7.3 7.5 7.3 7.6 7.7 7.6 7.5 7.7 7.5 8.1 7.7 7.3 7.4 7.3 7.4 7.3 7.5 7.4 7.6 7.7 7.4 7.1 7.2 7.1 7.0 7.0 6.9 6.8 6.7 6.5 6.8 6.7 7.2 7.4 7.3 7.4 7.4 7.1 7.2 7.2 7.4 7.4 7.5 7.2 7.4 7.1 7.1 7.2 7.2 7.2 7.3 7.2 7.3 7.2 7.1 7.5 7.3 7.7 7.7 7.4 7.0
AGMAPQ < 3 8.4 7.6 7.2 7.3 7.4 7.1 6.9 7.0 7.0 7.1 7.2 7.1 7.2 7.2 7.2 7.2 7.3 7.3 7.2 7.2 7.3 7.2 7.4 7.3 7.3 7.2 7.2 7.3 7.3 7.3 7.2 7.3 7.3 7.2 7.1 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.2 7.1 7.3 7.3 7.2 7.3 7.3 7.2 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.1 7.2 7.2 7.2 7.1 7.2 7.1 7.2 7.2 7.3 7.3 7.2 7.3 7.4 7.3 7.2
AGUnmapped 7.1 6.5 6.4 6.2 6.2 6.1 5.9 10.7 5.7 10.6 5.9 5.9 5.9 5.8 6.0 5.9 5.9 10.6 5.8 5.8 10.6 5.8 6.0 5.8 5.9 6.0 6.0 6.1 6.0 6.1 10.8 6.0 6.0 6.0 6.0 6.0 5.9 10.7 5.8 5.8 5.9 5.8 5.8 5.8 5.8 5.8 5.9 5.7 5.9 6.0 6.1 5.9 6.0 5.9 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.1 6.1 6.1 6.2 6.2 6.2 6.2 6.1 6.1 6.2 6.2 6.3
ATMAPQ >= 30 7.5 6.6 6.9 6.6 6.7 6.5 6.7 6.5 6.3 6.3 6.3 6.3 6.3 6.3 6.2 6.3 6.2 6.2 6.1 6.2 6.1 6.1 6.1 6.2 6.1 6.1 6.0 6.1 6.1 6.0 6.1 6.0 6.1 6.1 6.1 6.0 6.1 6.1 6.0 6.0 6.0 6.1 6.0 6.1 6.0 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 5.9 5.9 5.9 5.9 6.0 5.9 5.9 6.0 5.9 5.9 5.9 5.9 5.9 5.9 5.9
ATMAPQ >= 20 7.0 6.2 6.4 6.2 6.2 6.2 6.3 6.1 5.8 5.9 6.0 6.0 5.9 5.9 5.7 5.9 5.8 5.8 5.7 5.8 5.6 5.7 5.7 5.8 5.7 5.7 5.6 5.7 5.6 5.5 5.6 5.7 5.7 5.7 5.6 5.6 5.7 5.7 5.7 5.6 5.6 5.8 5.6 5.7 5.6 5.7 5.6 5.5 5.5 5.6 5.6 5.6 5.6 5.5 5.6 5.7 5.6 5.6 5.5 5.5 5.6 5.5 5.6 5.5 5.5 5.5 5.4 5.5 5.4 5.4 5.5 5.6 5.6 5.6
ATMAPQ >= 10 6.6 6.0 6.1 5.9 5.9 5.9 6.1 5.8 5.4 5.5 5.7 5.8 5.6 5.6 5.5 5.7 5.5 5.5 5.4 5.6 5.3 5.3 5.4 5.6 5.4 5.6 5.4 5.5 5.4 5.3 5.4 5.4 5.4 5.5 5.4 5.4 5.4 5.5 5.5 5.5 5.4 5.6 5.4 5.4 5.4 5.5 5.5 5.4 5.4 5.5 5.5 5.5 5.5 5.4 5.5 5.5 5.5 5.6 5.4 5.5 5.4 5.3 5.5 5.4 5.3 5.4 5.3 5.4 5.2 5.2 5.3 5.4 5.4 5.5
ATMAPQ >= 3 7.1 6.4 6.7 6.4 6.3 6.2 6.3 6.1 5.7 5.9 5.9 6.0 5.8 5.8 5.7 5.8 5.6 5.6 5.5 5.5 5.3 5.3 5.5 5.8 5.6 5.7 5.5 5.6 5.5 5.5 5.5 5.6 5.9 6.0 5.7 5.9 5.9 5.9 5.8 5.9 6.0 6.1 5.8 5.5 5.4 5.5 5.4 5.5 5.7 5.8 5.6 5.6 5.5 5.4 5.6 5.6 5.5 5.9 5.7 5.6 5.7 5.7 5.8 5.7 5.7 5.7 5.5 5.8 5.5 5.6 5.7 5.9 5.9 6.0
ATMAPQ < 3 7.6 6.7 7.0 6.6 6.7 6.7 6.9 6.6 6.3 6.3 6.5 6.4 6.4 6.3 6.2 6.4 6.3 6.2 6.2 6.3 6.2 6.3 6.2 6.4 6.3 6.3 6.2 6.3 6.2 6.2 6.2 6.2 6.3 6.3 6.2 6.2 6.3 6.3 6.2 6.3 6.3 6.3 6.3 6.2 6.2 6.2 6.2 6.1 6.1 6.2 6.2 6.2 6.2 6.1 6.2 6.3 6.2 6.2 6.1 6.1 6.2 6.1 6.1 6.1 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.2 6.2 6.2
ATUnmapped 8.5 12.5 7.8 7.3 7.2 7.5 7.7 7.3 6.9 6.7 7.2 7.0 7.0 6.7 6.4 7.1 6.8 6.7 6.4 6.3 6.6 6.8 6.5 6.4 11.0 6.6 6.5 6.5 6.2 6.1 6.6 6.6 6.5 6.2 6.0 6.4 6.5 6.3 6.1 10.7 6.3 6.3 11.1 6.0 6.0 6.3 6.3 6.1 6.0 10.6 6.3 6.3 6.3 6.0 5.9 6.3 6.4 6.3 6.0 5.9 6.3 6.3 6.2 6.0 6.0 6.3 6.4 6.3 6.1 6.1 6.5 6.6 6.5 6.3
CAMAPQ >= 30 8.4 6.7 7.3 7.6 7.1 7.4 7.1 7.5 7.6 7.6 7.5 7.6 7.6 7.6 7.6 7.5 7.6 7.6 7.6 7.7 7.6 7.7 7.6 7.7 7.6 7.6 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.8 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.7
CAMAPQ >= 20 8.3 6.6 7.3 7.6 7.2 7.5 7.1 7.7 7.7 7.8 7.6 7.7 7.8 7.7 7.8 7.6 7.8 7.7 7.7 7.9 7.7 7.8 7.7 7.9 7.7 7.7 7.7 7.7 7.7 7.8 7.8 7.9 7.8 7.6 7.9 7.8 7.7 7.8 7.7 7.8 7.6 7.7 7.7 7.7 7.9 7.9 7.7 7.7 7.8 7.7 7.8 7.7 7.8 7.9 7.6 7.6 7.5 7.6 7.6 7.8 7.6 7.8 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.7 7.8 7.6 7.7 7.6
CAMAPQ >= 10 8.3 6.5 7.3 7.6 7.2 7.5 7.0 7.7 7.7 7.8 7.6 7.6 7.7 7.7 7.7 7.5 7.7 7.7 7.7 7.9 7.6 7.8 7.7 8.0 7.6 7.7 7.8 8.0 8.0 7.9 8.0 8.1 7.9 7.6 8.1 8.0 7.9 8.1 7.8 7.9 7.6 7.6 7.8 7.7 7.9 7.8 7.7 7.8 7.9 7.7 7.8 7.7 7.9 8.0 7.6 7.9 7.7 7.8 7.8 8.0 7.7 8.1 7.7 7.9 7.6 7.8 7.8 7.8 7.7 7.8 7.9 7.8 7.8 7.7
CAMAPQ >= 3 8.3 6.5 7.5 7.6 7.3 7.6 7.1 8.1 7.8 7.9 7.7 7.6 7.6 7.4 7.5 7.2 7.2 7.2 7.2 7.6 7.3 7.7 7.4 7.5 7.3 7.4 7.6 7.8 7.9 8.0 8.1 8.0 7.9 7.6 8.0 7.9 8.0 7.8 7.5 7.6 7.4 7.3 7.4 7.2 7.7 7.7 7.5 7.6 7.6 7.3 7.5 7.4 7.4 7.5 7.2 7.2 7.3 7.2 7.3 7.6 7.4 7.6 7.2 7.3 7.2 7.4 7.4 7.5 7.5 7.6 7.5 7.5 7.5 7.5
CAMAPQ < 3 8.4 6.6 7.3 7.6 7.3 7.6 7.2 7.7 7.7 7.8 7.6 7.6 7.6 7.6 7.7 7.5 7.6 7.6 7.7 7.7 7.6 7.7 7.6 7.8 7.6 7.6 7.8 7.8 7.8 7.8 7.9 7.9 7.8 7.7 7.8 7.8 7.8 7.8 7.8 7.8 7.7 7.7 7.7 7.7 7.8 7.7 7.7 7.8 7.8 7.7 7.8 7.7 7.8 7.8 7.7 7.7 7.7 7.7 7.7 7.8 7.7 7.8 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7
CAUnmapped 7.8 6.3 6.6 7.0 6.9 7.2 6.6 6.7 6.9 7.2 6.9 6.8 6.5 6.6 6.8 6.6 11.3 6.4 6.6 11.6 6.7 6.5 6.3 6.5 6.6 6.5 6.5 6.3 6.5 6.7 6.6 6.4 6.3 6.3 6.5 6.5 11.0 6.2 6.3 6.5 6.4 11.1 6.2 6.4 6.5 6.4 6.2 6.2 6.4 6.8 6.6 6.5 6.3 6.4 6.6 6.5 6.3 6.2 6.4 6.7 6.6 6.4 6.3 6.4 6.7 6.6 6.5 6.3 6.4 6.6 6.5 6.3 6.4 6.5
CCMAPQ >= 30 5.9 5.5 5.8 5.4 5.7 6.0 6.1 6.2 6.1 6.1 6.2 6.3 6.3 6.4 6.3 6.4 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.5 6.5 6.5 6.5 6.5 6.6 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.5 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.6 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7
CCMAPQ >= 20 5.8 5.5 5.7 5.4 5.7 6.0 6.1 6.3 6.2 6.2 6.3 6.3 6.1 6.5 6.3 6.4 6.6 6.8 6.8 6.8 6.8 6.8 6.8 6.6 6.7 6.8 6.9 6.9 6.9 6.8 6.7 6.7 6.8 6.8 6.8 6.6 6.8 6.7 6.7 6.7 6.8 6.8 6.8 6.9 6.9 6.9 6.8 6.8 6.9 6.9 6.8 6.7 6.8 6.7 6.7 6.7 6.8 6.8 7.0 7.0 7.0 7.0 7.2 7.2 7.2 7.3 7.3 7.4 7.4 7.3 7.2 7.3 7.4 7.5
CCMAPQ >= 10 6.1 5.8 5.9 5.6 5.9 6.4 6.4 6.6 6.5 6.6 6.6 6.4 6.4 7.0 6.7 6.9 7.2 7.4 7.3 7.3 7.3 7.5 7.4 7.1 7.3 7.4 7.7 7.6 7.5 7.5 7.4 7.3 7.3 7.5 7.5 7.3 7.5 7.4 7.4 7.4 7.5 7.6 7.6 7.7 7.8 7.8 7.6 7.6 7.8 7.7 7.6 7.4 7.5 7.5 7.5 7.5 7.5 7.4 7.6 7.8 7.6 7.6 7.8 8.0 7.9 7.9 8.0 8.0 8.0 7.9 7.9 8.0 8.1 8.3
CCMAPQ >= 3 6.0 5.8 5.8 5.6 5.9 6.3 6.4 6.8 6.6 6.9 6.8 6.6 6.5 7.0 6.6 7.0 7.4 7.4 7.5 7.5 7.3 7.4 7.2 6.9 7.2 7.3 7.3 7.3 7.3 7.2 7.0 7.0 7.2 7.4 7.6 7.4 7.6 7.3 7.5 7.4 7.7 7.9 7.9 8.4 8.5 8.7 8.4 8.3 8.4 8.3 8.3 8.0 8.0 7.8 7.6 7.6 7.6 7.5 7.6 7.5 7.2 7.3 7.3 7.4 7.3 7.3 7.5 7.6 7.5 7.4 7.5 7.9 8.1 8.5
CCMAPQ < 3 5.9 5.6 5.8 5.4 5.8 6.0 6.1 6.3 6.2 6.2 6.3 6.2 6.2 6.5 6.4 6.5 6.6 6.7 6.7 6.7 6.7 6.7 6.7 6.6 6.7 6.7 6.8 6.7 6.7 6.7 6.7 6.6 6.7 6.7 6.8 6.6 6.7 6.6 6.7 6.7 6.8 6.8 6.8 6.9 6.9 6.9 6.9 6.9 6.9 6.9 6.9 6.8 6.8 6.8 6.8 6.7 6.7 6.7 6.8 6.9 6.8 6.8 6.9 6.9 6.9 6.9 6.9 6.9 6.9 6.9 6.9 7.0 7.0 7.1
CCUnmapped 4.9 4.6 4.8 4.8 4.9 4.9 4.8 5.0 5.1 5.0 4.9 4.8 4.8 5.1 5.0 4.8 4.8 5.0 5.2 5.1 5.0 4.9 4.9 5.1 5.1 5.0 5.0 9.8 5.3 5.2 5.1 5.0 5.2 10.2 5.5 5.4 5.4 5.6 6.0 6.0 5.9 5.8 5.8 6.1 6.2 6.2 6.3 6.5 6.7 6.7 6.6 6.5 11.3 6.8 6.6 6.6 6.4 6.5 6.8 6.8 6.6 6.5 6.6 6.8 6.7 6.5 6.3 6.5 6.7 6.6 6.5 6.4 6.5 6.8
CGMAPQ >= 30 1.3 1.1 1.1 1.3 1.3 1.4 1.3 1.4 1.5 1.4 1.4 1.4 1.4 1.4 1.6 1.5 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.4 1.5 1.4 1.4 1.5 1.4 1.4 1.4 1.4 1.4 1.5 1.4 1.4 1.4 1.5 1.4 1.4 1.4 1.5 1.5 1.5 1.5 1.5 1.5 1.4 1.4 1.4 1.5 1.5 1.4 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5 1.5
CGMAPQ >= 20 1.9 1.6 1.7 2.1 2.0 2.1 1.9 2.3 2.2 2.0 2.0 2.1 2.1 2.1 2.2 2.2 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.0 2.0 2.1 2.0 2.1 2.2 2.1 2.2 2.1 2.1 2.1 2.2 2.1 2.2 2.1 2.2 2.1 2.1 2.1 2.2 2.2 2.2 2.1 2.1 2.1 2.2 2.1 2.2 2.2 2.3 2.2 2.2 2.1 2.2 2.2 2.2 2.1 2.2 2.2 2.1 2.1 2.2 2.1 2.2 2.2 2.2 2.2 2.2 2.1 2.2
CGMAPQ >= 10 2.1 1.8 1.9 2.4 2.3 2.5 2.2 2.7 2.5 2.3 2.4 2.4 2.4 2.4 2.6 2.6 2.4 2.4 2.4 2.5 2.4 2.5 2.5 2.4 2.4 2.4 2.4 2.4 2.4 2.5 2.4 2.5 2.4 2.3 2.4 2.5 2.5 2.5 2.5 2.6 2.3 2.4 2.5 2.5 2.6 2.5 2.5 2.5 2.4 2.5 2.4 2.5 2.5 2.6 2.5 2.5 2.4 2.5 2.5 2.5 2.5 2.5 2.4 2.4 2.4 2.4 2.5 2.4 2.5 2.5 2.5 2.4 2.3 2.4
CGMAPQ >= 3 2.1 1.8 2.0 2.3 2.3 2.6 2.2 2.7 2.4 2.1 2.3 2.4 2.4 2.4 2.6 2.6 2.4 2.4 2.4 2.6 2.6 2.8 2.7 2.6 2.5 2.5 2.5 2.5 2.6 2.8 2.5 2.6 2.4 2.3 2.5 2.7 2.6 2.7 2.6 2.7 2.4 2.4 2.6 2.6 2.7 2.5 2.6 2.5 2.5 2.6 2.6 2.6 2.7 2.8 2.5 2.6 2.4 2.5 2.5 2.5 2.6 2.4 2.3 2.3 2.2 2.3 2.4 2.5 2.5 2.6 2.4 2.4 2.2 2.4
CGMAPQ < 3 1.8 1.5 1.7 2.0 1.9 2.0 1.8 2.1 2.1 2.0 2.0 2.0 2.0 2.0 2.2 2.1 2.0 2.0 2.0 2.1 2.1 2.1 2.1 2.1 2.0 2.1 2.1 2.0 2.1 2.1 2.1 2.1 2.0 2.0 2.1 2.1 2.1 2.1 2.1 2.1 2.0 2.0 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.1 2.0 2.1 2.1 2.1 2.0 2.1 2.0 2.0 2.0 2.1 2.0 2.0 2.1 2.1 2.1 2.0 2.0 2.0
CGUnmapped 1.8 1.4 1.6 6.6 1.8 1.9 1.6 1.9 2.0 1.9 1.8 6.7 1.9 1.9 2.1 1.9 1.9 1.9 1.9 2.0 1.9 1.9 1.9 2.0 2.0 2.0 2.0 2.0 6.9 2.2 2.1 2.1 2.0 2.1 6.9 2.2 2.1 2.1 2.1 2.2 2.1 2.1 2.1 2.2 2.2 2.2 6.9 2.2 2.3 2.3 2.3 2.3 2.3 7.1 2.4 2.4 2.3 2.4 2.4 2.5 2.4 2.4 2.4 2.5 2.5 2.6 2.5 2.5 2.6 2.6 2.6 2.6 2.7 2.7
CTMAPQ >= 30 8.1 7.0 7.2 7.3 6.9 7.3 7.4 7.6 7.4 7.4 7.4 7.6 7.5 7.4 7.4 7.4 7.5 7.6 7.6 7.5 7.6 7.6 7.6 7.6 7.5 7.5 7.5 7.6 7.6 7.5 7.5 7.6 7.7 7.6 7.6 7.5 7.5 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.6 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.6 7.6 7.7 7.6 7.6 7.6 7.6 7.6
CTMAPQ >= 20 7.9 7.0 7.2 7.2 6.8 7.2 7.3 7.6 7.1 7.3 7.2 7.7 7.5 7.4 7.5 7.5 7.5 7.7 7.7 7.6 7.7 7.6 7.5 7.5 7.5 7.6 7.5 7.5 7.4 7.3 7.3 7.2 7.5 7.4 7.5 7.4 7.4 7.4 7.4 7.4 7.5 7.7 7.6 7.7 7.6 7.6 7.7 7.5 7.5 7.7 7.6 7.6 7.7 7.4 7.5 7.4 7.6 7.6 7.4 7.5 7.5 7.5 7.4 7.4 7.5 7.4 7.4 7.4 7.4 7.2 7.1 7.2 7.2 7.1
CTMAPQ >= 10 8.0 7.0 7.3 7.2 6.9 7.4 7.4 7.6 7.1 7.3 7.2 7.8 7.7 7.5 7.8 7.6 7.5 7.8 7.7 7.5 7.7 7.7 7.5 7.4 7.4 7.5 7.4 7.4 7.4 7.4 7.4 7.4 7.8 7.5 7.7 7.4 7.5 7.6 7.5 7.5 7.5 7.9 7.8 7.8 7.6 7.7 8.0 7.6 7.6 8.0 7.9 7.9 7.9 7.5 7.7 7.7 8.0 7.9 7.7 7.8 8.0 7.9 7.7 7.7 7.9 7.8 7.7 7.7 7.6 7.3 7.3 7.3 7.2 7.2
CTMAPQ >= 3 7.9 6.9 7.3 7.3 7.0 7.3 6.9 7.2 6.8 7.0 7.0 7.8 7.7 7.3 7.5 7.2 7.2 7.6 7.6 7.4 7.6 7.3 7.3 7.3 7.3 7.4 7.4 7.1 7.0 6.9 6.8 6.7 7.1 6.9 7.3 7.1 7.3 7.4 7.3 7.5 7.4 8.0 7.9 8.0 7.6 7.5 7.6 7.4 7.4 7.8 7.9 8.0 8.1 7.5 7.8 7.6 8.0 8.0 7.9 8.0 8.0 7.7 7.8 7.6 7.7 7.5 7.4 7.6 7.5 7.1 6.8 6.8 6.8 6.9
CTMAPQ < 3 7.7 6.7 7.0 7.0 6.7 7.1 7.1 7.3 7.0 7.1 7.1 7.3 7.3 7.2 7.3 7.2 7.2 7.4 7.4 7.3 7.3 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.2 7.1 7.2 7.1 7.3 7.2 7.3 7.2 7.2 7.2 7.2 7.2 7.2 7.4 7.4 7.4 7.3 7.3 7.4 7.3 7.3 7.4 7.4 7.4 7.5 7.2 7.4 7.3 7.4 7.4 7.4 7.5 7.5 7.5 7.4 7.4 7.4 7.4 7.3 7.3 7.3 7.2 7.1 7.1 7.1 7.1
CTUnmapped 6.9 6.1 6.2 6.3 6.0 6.4 6.4 6.5 6.2 6.2 6.1 6.1 6.1 6.0 5.9 5.9 5.9 5.9 5.9 5.8 5.8 5.8 5.8 5.6 5.6 5.7 5.6 5.6 5.6 5.4 5.5 5.6 5.6 5.5 5.5 5.5 5.6 5.6 5.6 5.6 5.6 5.7 5.7 5.7 10.4 5.6 5.6 5.5 5.6 5.5 5.6 5.6 5.6 5.4 5.6 5.5 10.3 5.4 5.5 10.2 5.5 5.5 10.2 5.5 5.4 5.4 5.4 5.3 5.4 5.3 5.4 5.4 5.4 5.4
GAMAPQ >= 30 6.0 6.3 6.3 6.3 6.3 6.2 6.0 5.6 5.9 6.0 5.9 5.9 5.8 5.8 5.9 5.9 5.9 5.9 5.9 5.9 5.9 5.9 5.9 6.0 5.9 5.9 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.1 6.0 6.0 6.0 6.0 6.0 6.0 6.1 6.1 6.1 6.0 6.1 6.0 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.1 6.0 6.1 6.0 6.1 6.1 6.1 6.0 6.0 6.1 6.1 6.1 6.1 6.1
GAMAPQ >= 20 6.4 6.6 6.5 6.6 6.5 6.6 6.3 5.9 6.3 6.3 6.2 6.1 6.1 6.1 6.2 6.1 6.1 6.1 6.2 6.1 6.1 6.3 6.3 6.4 6.3 6.1 6.5 6.4 6.5 6.3 6.4 6.5 6.4 6.4 6.5 6.4 6.3 6.3 6.4 6.5 6.5 6.2 6.4 6.3 6.4 6.4 6.4 6.5 6.6 6.5 6.4 6.4 6.3 6.5 6.5 6.5 6.6 6.4 6.5 6.4 6.4 6.3 6.4 6.4 6.4 6.2 6.5 6.2 6.2 6.3 6.5 6.5 6.6 6.4
GAMAPQ >= 10 6.2 6.4 6.2 6.4 6.2 6.4 6.3 5.8 6.4 6.3 6.1 6.0 5.9 6.0 6.1 6.1 6.1 6.1 6.2 6.1 6.1 6.4 6.4 6.5 6.4 6.2 6.6 6.3 6.4 6.2 6.3 6.5 6.5 6.3 6.6 6.4 6.3 6.5 6.4 6.7 6.7 6.2 6.4 6.4 6.5 6.6 6.5 6.6 6.7 6.6 6.3 6.5 6.4 6.7 6.7 6.7 6.8 6.6 6.7 6.5 6.6 6.4 6.7 6.3 6.5 6.3 6.6 6.2 6.2 6.4 6.7 6.6 6.7 6.4
GAMAPQ >= 3 5.7 5.8 5.6 5.6 5.5 5.8 5.8 5.4 6.0 5.9 5.9 5.7 5.7 5.8 5.9 6.1 6.3 6.2 6.2 6.3 6.3 6.5 6.6 6.5 6.6 6.2 6.6 6.4 6.5 6.3 6.5 6.9 6.7 6.3 6.5 6.3 6.1 6.5 6.4 6.5 6.4 5.9 6.0 6.1 6.2 6.4 6.4 6.6 6.7 6.3 6.2 6.2 6.3 6.5 6.8 6.5 6.8 6.4 6.5 6.3 6.5 6.4 6.7 6.3 6.5 6.1 6.3 6.1 6.2 6.6 6.8 6.9 6.7 6.3
GAMAPQ < 3 6.5 6.6 6.5 6.6 6.6 6.6 6.4 5.9 6.3 6.4 6.3 6.3 6.2 6.3 6.3 6.3 6.4 6.3 6.4 6.4 6.4 6.5 6.5 6.6 6.5 6.3 6.6 6.5 6.5 6.4 6.5 6.5 6.5 6.4 6.6 6.5 6.5 6.5 6.5 6.6 6.6 6.4 6.5 6.5 6.6 6.6 6.5 6.5 6.6 6.5 6.4 6.5 6.5 6.6 6.6 6.5 6.7 6.5 6.6 6.5 6.5 6.5 6.6 6.5 6.5 6.4 6.6 6.4 6.4 6.5 6.6 6.6 6.5 6.5
GAUnmapped 11.5 6.6 6.1 6.4 6.5 11.3 6.1 5.5 10.7 6.3 6.1 6.1 5.8 6.0 6.2 6.2 6.0 5.8 5.9 6.1 6.1 6.1 10.6 6.1 6.2 6.2 6.3 6.1 6.3 11.2 6.5 11.0 6.0 6.2 6.3 6.3 6.2 5.9 10.8 6.2 6.2 6.1 5.9 6.0 6.1 6.1 5.9 5.8 6.0 6.2 6.2 6.1 5.9 6.1 6.2 6.3 6.2 5.9 6.1 6.3 6.4 6.3 6.1 6.3 6.5 11.1 6.5 6.2 6.4 6.6 6.6 6.5 6.3 6.6
GCMAPQ >= 30 4.8 4.8 5.0 4.9 5.2 5.0 5.3 5.0 5.1 5.2 5.3 5.3 5.3 5.3 5.3 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.5 5.5 5.5 5.6 5.5 5.4 5.4 5.4 5.4 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5 5.5
GCMAPQ >= 20 5.2 5.1 5.4 5.2 5.5 5.3 5.7 5.3 5.4 5.5 5.6 5.6 5.6 5.6 5.7 5.7 5.7 5.7 5.7 5.8 5.8 5.8 5.8 5.8 5.6 5.8 5.6 5.7 5.7 5.8 6.0 5.9 5.7 5.7 5.7 5.7 5.8 5.8 5.8 5.7 5.8 5.7 5.7 5.8 5.7 5.8 5.7 5.8 5.8 5.7 5.7 5.9 5.7 5.6 5.7 5.7 5.8 5.7 5.8 5.7 5.7 5.6 5.7 5.5 5.6 5.6 5.7 5.7 5.6 5.7 5.7 5.6 5.6 5.6
GCMAPQ >= 10 5.8 5.6 5.9 5.6 6.0 5.7 6.3 5.6 5.8 5.9 5.9 6.1 6.1 6.1 6.1 6.0 6.2 6.0 6.1 6.2 6.3 6.2 6.1 6.2 5.9 6.2 6.0 6.2 6.3 6.3 6.6 6.6 6.1 6.3 6.1 6.2 6.3 6.3 6.2 6.1 6.2 6.4 6.2 6.5 6.3 6.5 6.2 6.3 6.1 6.1 6.0 6.3 6.1 6.0 6.2 6.2 6.2 6.0 6.2 6.1 6.2 6.2 6.3 6.0 6.1 6.0 6.3 6.2 6.2 6.3 6.3 6.2 6.2 6.1
GCMAPQ >= 3 5.8 5.5 5.9 5.5 6.0 5.6 6.4 5.7 5.7 5.9 5.8 5.9 5.7 5.8 5.8 5.8 5.7 5.7 5.8 5.8 6.0 6.1 5.9 6.1 5.8 5.9 5.4 5.6 5.8 5.8 6.1 6.0 5.6 6.1 6.0 6.1 6.1 6.1 6.0 6.1 5.9 6.1 5.8 6.1 5.9 5.8 5.6 5.9 5.7 6.0 5.8 5.9 5.8 5.8 5.9 6.0 5.8 5.7 5.8 5.8 5.9 6.0 6.0 5.6 6.0 6.0 6.4 6.5 6.2 6.2 6.3 6.1 6.2 6.0
GCMAPQ < 3 5.0 4.8 5.1 4.9 5.3 5.0 5.4 5.0 5.1 5.2 5.2 5.3 5.3 5.4 5.3 5.3 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.4 5.3 5.4 5.3 5.4 5.4 5.5 5.6 5.6 5.3 5.5 5.4 5.4 5.5 5.5 5.4 5.4 5.4 5.5 5.4 5.5 5.4 5.5 5.4 5.4 5.4 5.4 5.3 5.4 5.3 5.3 5.4 5.4 5.4 5.4 5.4 5.4 5.5 5.5 5.5 5.3 5.4 5.4 5.5 5.5 5.4 5.5 5.5 5.4 5.5 5.4
GCUnmapped 3.6 3.5 3.7 3.7 4.0 3.7 3.9 3.7 3.8 3.8 8.6 3.8 3.8 3.8 3.8 4.0 3.8 3.9 8.7 3.9 3.8 3.8 3.7 3.8 3.8 3.8 8.5 3.9 3.8 3.8 3.8 3.8 3.7 3.8 3.8 8.5 3.8 3.8 3.8 3.8 3.8 3.8 3.9 3.8 3.9 3.8 3.9 3.9 4.0 4.0 4.1 8.8 4.1 4.1 4.1 4.1 4.1 4.1 4.2 4.2 4.2 8.8 4.2 4.1 4.1 4.2 4.2 4.2 4.2 4.2 4.1 4.2 4.1 4.2
GGMAPQ >= 30 6.6 6.4 6.6 6.2 6.3 6.4 6.1 5.8 6.1 6.2 6.2 6.1 6.1 6.2 6.3 6.4 6.4 6.5 6.5 6.5 6.5 6.5 6.4 6.5 6.5 6.5 6.6 6.6 6.5 6.6 6.7 6.5 6.6 6.6 6.6 6.6 6.7 6.7 6.7 6.7 6.7 6.7 6.6 6.6 6.7 6.6 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.6 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.8 6.8 6.8 6.8 6.9 6.8 6.8
GGMAPQ >= 20 7.2 7.0 7.1 6.5 6.8 7.0 6.5 6.3 6.7 6.8 6.6 6.4 6.4 6.6 6.7 6.6 6.7 6.8 6.9 6.9 6.9 6.8 6.8 7.1 7.0 7.2 7.0 7.1 7.1 7.3 7.4 7.1 7.2 7.3 7.1 7.2 7.4 7.2 7.3 7.3 7.4 7.3 7.2 7.0 7.2 7.1 7.3 7.3 7.2 7.1 7.3 7.2 7.1 7.1 7.2 7.2 7.0 7.1 7.1 7.2 7.2 7.1 7.1 7.1 7.1 7.2 7.2 7.2 7.3 7.5 7.4 7.4 7.4 7.4
GGMAPQ >= 10 8.3 8.0 7.8 7.1 7.5 7.9 7.2 6.8 7.5 7.7 7.4 6.9 6.9 7.1 7.3 7.2 7.2 7.3 7.6 7.7 7.7 7.4 7.4 7.8 7.8 8.0 7.7 7.8 7.9 8.0 8.2 7.7 7.8 8.1 7.7 7.7 8.0 7.7 7.7 7.8 7.8 7.7 7.6 7.4 7.7 7.3 7.6 7.5 7.5 7.3 7.5 7.4 7.3 7.3 7.4 7.3 7.0 7.1 7.2 7.2 7.2 6.9 6.8 6.9 6.9 7.0 6.8 7.0 7.3 7.4 7.2 7.3 7.1 7.1
GGMAPQ >= 3 8.4 7.9 7.6 6.8 7.0 7.5 6.8 6.3 6.9 7.3 6.8 6.4 6.5 6.8 7.2 7.2 7.4 7.6 7.9 7.8 8.0 7.8 7.9 8.4 8.4 8.4 8.2 8.4 8.5 8.6 8.9 8.2 8.2 8.0 7.5 7.4 7.7 7.5 7.6 7.7 7.6 7.5 7.3 6.9 7.2 7.1 7.5 7.4 7.3 7.2 7.3 7.3 7.1 7.3 7.5 7.5 7.4 7.4 7.4 7.2 7.2 7.1 7.1 7.2 7.1 7.2 7.0 6.9 7.0 7.4 7.1 7.3 7.0 7.0
GGMAPQ < 3 7.2 6.8 6.8 6.4 6.6 6.8 6.3 6.0 6.4 6.5 6.4 6.2 6.3 6.4 6.6 6.5 6.6 6.7 6.8 6.8 6.8 6.7 6.7 6.9 6.9 6.9 6.9 6.9 7.0 7.1 7.1 6.8 6.9 7.0 6.8 6.9 7.0 6.8 6.9 6.9 6.9 6.8 6.8 6.7 6.8 6.7 6.8 6.8 6.8 6.7 6.8 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.7 6.6 6.6 6.6 6.6 6.7 6.6 6.6 6.7 6.8 6.7 6.8 6.8 6.8
GGUnmapped 5.6 5.1 5.2 5.1 10.0 5.1 4.7 4.7 5.0 5.1 5.0 4.8 9.8 5.1 5.2 5.2 5.0 5.2 5.4 5.4 5.4 10.0 5.5 5.7 5.8 5.8 5.8 6.0 6.3 6.5 6.6 6.5 6.9 7.0 7.1 7.2 7.0 7.1 7.3 7.3 7.3 7.1 7.0 7.1 7.2 7.1 7.0 7.2 7.2 7.3 7.4 7.3 7.5 7.8 8.0 8.2 8.2 8.5 8.7 9.0 9.0 8.8 9.1 9.3 9.5 9.6 9.4 9.5 9.7 9.7 9.5 9.3 9.4 9.4
GTMAPQ >= 30 5.8 5.0 5.2 5.3 5.3 5.2 5.5 5.3 5.1 5.2 5.2 5.2 5.1 5.1 5.1 5.3 5.2 5.2 5.2 5.2 5.3 5.3 5.2 5.2 5.3 5.2 5.2 5.3 5.3 5.2 5.3 5.3 5.3 5.3 5.2 5.2 5.3 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.2 5.2
GTMAPQ >= 20 6.0 5.3 5.3 5.6 5.4 5.4 5.6 5.5 5.4 5.5 5.4 5.4 5.3 5.3 5.3 5.4 5.4 5.3 5.2 5.3 5.4 5.3 5.3 5.2 5.4 5.4 5.4 5.4 5.4 5.3 5.5 5.4 5.4 5.4 5.3 5.3 5.3 5.3 5.3 5.2 5.3 5.3 5.2 5.2 5.1 5.1 5.1 5.2 5.1 5.2 5.1 5.2 5.2 5.1 5.2 5.1 5.1 5.0 5.0 4.9 4.9 4.9 4.9 4.9 4.9 4.8 4.9 4.9 5.0 5.0 5.1 4.9 5.0 5.0
GTMAPQ >= 10 6.1 5.4 5.4 5.8 5.4 5.4 5.7 5.6 5.5 5.6 5.5 5.7 5.3 5.5 5.3 5.5 5.5 5.4 5.2 5.4 5.4 5.4 5.3 5.3 5.5 5.4 5.4 5.2 5.2 5.1 5.3 5.2 5.2 5.2 5.3 5.2 5.2 5.3 5.1 5.1 5.3 5.2 5.2 5.1 5.0 5.1 5.0 5.1 5.0 5.1 5.0 5.0 5.1 5.0 5.1 5.0 5.0 4.7 4.7 4.7 4.6 4.8 4.7 4.8 4.8 4.8 4.8 4.8 5.0 5.0 4.9 4.8 5.0 4.9
GTMAPQ >= 3 6.2 5.6 5.6 5.8 5.4 5.3 5.8 5.6 5.4 5.5 5.5 5.5 5.3 5.5 5.3 5.5 5.3 5.3 5.2 5.3 5.3 5.2 5.3 5.3 5.5 5.4 5.4 5.4 5.2 5.3 5.4 5.4 5.5 5.3 5.3 5.1 5.1 5.3 5.2 5.2 5.4 5.3 5.4 5.3 5.2 5.2 5.1 5.2 5.1 5.2 5.0 5.0 5.2 5.1 5.1 4.9 5.1 4.8 4.7 4.8 4.6 4.9 4.8 5.0 5.0 5.0 4.9 4.9 4.9 5.0 4.9 4.8 5.0 4.7
GTMAPQ < 3 5.9 5.1 5.2 5.4 5.3 5.2 5.5 5.3 5.2 5.3 5.2 5.3 5.1 5.2 5.2 5.3 5.3 5.2 5.2 5.3 5.3 5.2 5.2 5.2 5.3 5.3 5.2 5.2 5.2 5.1 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.2 5.1 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.1 5.0 5.0 4.9 4.9 4.9 4.9 5.0 4.9 5.0 5.0 4.9 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0
GTUnmapped 5.7 4.7 4.7 4.8 4.8 4.7 4.9 4.7 4.6 4.7 4.6 4.6 4.5 9.3 4.5 4.8 4.6 4.6 4.6 4.5 4.6 4.5 4.5 4.5 4.5 4.5 4.5 4.6 4.5 4.5 4.6 4.6 4.7 4.7 4.6 4.6 4.7 4.7 4.6 4.5 4.6 4.6 4.7 4.6 4.6 4.6 4.6 9.3 4.6 4.5 4.6 4.6 4.5 4.5 9.1 4.4 4.5 4.4 4.4 4.4 4.5 4.4 4.4 4.3 4.3 4.4 4.4 4.3 4.3 4.3 4.4 4.4 4.4 4.4
TAMAPQ >= 30 4.9 5.9 5.6 6.0 5.7 5.5 5.4 5.4 5.4 5.3 5.3 5.3 5.3 5.3 5.4 5.3 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.2 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.1 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 5.0 4.9 5.0 4.9 4.9 4.9 4.9 4.9 4.9 4.9 5.0 4.9 4.9 4.9 4.9 4.9 4.9 4.9 4.9
TAMAPQ >= 20 4.1 4.9 4.7 5.0 4.7 4.5 4.4 4.4 4.4 4.4 4.3 4.3 4.3 4.4 4.6 4.4 4.3 4.4 4.3 4.3 4.3 4.4 4.3 4.3 4.3 4.3 4.1 4.2 4.2 4.1 4.1 4.2 4.1 4.1 4.1 4.1 4.1 4.0 4.1 4.2 4.1 4.0 4.0 4.1 4.1 4.1 4.0 4.0 4.1 4.1 4.1 4.1 4.0 4.1 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 3.9 4.0 4.1 4.0 4.0 4.0 4.1 4.1 4.0 4.0 4.0
TAMAPQ >= 10 3.8 4.6 4.3 4.7 4.4 4.2 4.1 4.1 4.1 4.1 4.1 4.0 4.1 4.1 4.4 4.2 3.9 4.0 3.9 4.0 3.9 4.2 3.9 3.9 3.9 4.0 3.7 3.7 3.7 3.6 3.7 3.7 3.6 3.6 3.6 3.7 3.5 3.4 3.6 3.7 3.6 3.5 3.6 3.6 3.6 3.6 3.5 3.7 3.7 3.7 3.8 3.7 3.6 3.7 3.6 3.6 3.7 3.8 3.8 3.9 3.9 3.8 3.9 3.7 3.8 3.9 3.9 3.9 3.8 3.9 3.9 3.8 3.7 3.7
TAMAPQ >= 3 4.3 5.1 4.9 5.3 5.1 4.9 4.6 4.8 4.6 4.6 4.6 4.6 4.8 5.0 5.0 5.0 4.5 4.4 4.2 4.4 4.3 4.4 4.3 4.2 4.1 4.2 3.9 3.9 3.9 3.8 4.0 3.9 3.8 3.8 3.9 3.9 3.7 3.7 3.8 4.0 3.9 3.9 4.0 4.0 4.1 4.0 3.8 4.0 4.0 4.1 4.3 4.1 4.0 4.1 3.9 4.1 4.0 4.4 4.4 4.6 4.7 4.4 4.4 4.4 4.4 4.5 4.5 4.5 4.4 4.6 4.4 4.3 4.2 4.1
TAMAPQ < 3 4.1 5.1 4.8 5.2 4.9 4.7 4.6 4.7 4.6 4.6 4.6 4.5 4.5 4.6 4.8 4.6 4.5 4.5 4.5 4.5 4.5 4.6 4.5 4.4 4.4 4.4 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.2 4.3 4.3 4.3 4.2 4.3 4.3 4.3 4.3 4.2 4.3 4.3 4.3 4.4 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.3 4.4 4.3 4.3 4.3 4.3 4.3 4.4 4.3 4.4 4.3 4.4 4.3 4.3 4.2 4.3
TAUnmapped 4.4 5.5 5.0 5.4 5.2 4.8 4.8 4.8 4.8 4.7 4.6 4.6 4.5 4.5 4.9 4.5 4.4 4.3 4.3 4.3 4.2 4.3 4.2 4.2 4.3 4.2 4.2 4.1 4.2 4.2 4.1 4.1 4.1 4.0 4.0 4.0 3.9 4.0 3.9 4.0 3.9 3.9 3.9 3.9 3.9 3.9 3.8 3.9 8.6 3.9 3.8 3.9 3.8 3.9 3.9 3.9 3.9 3.8 3.9 3.9 3.8 3.9 3.9 3.9 3.9 3.9 3.9 3.8 3.8 3.7 3.8 3.7 3.8 3.8
TCMAPQ >= 30 4.1 6.0 5.8 5.7 6.0 5.8 6.2 6.2 6.2 6.1 6.2 6.1 6.1 6.1 6.0 6.0 6.1 6.1 6.1 6.1 6.1 6.0 6.1 6.1 6.1 6.1 6.1 6.0 6.1 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.0 6.0 6.1 6.0 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1 6.1
TCMAPQ >= 20 4.3 6.2 6.2 6.1 6.5 6.0 6.8 6.7 6.7 6.4 6.6 6.5 6.7 6.6 6.5 6.5 6.6 6.6 6.7 6.6 6.5 6.4 6.4 6.4 6.6 6.5 6.5 6.4 6.5 6.3 6.1 6.3 6.2 6.5 6.4 6.5 6.4 6.4 6.4 6.4 6.5 6.5 6.7 6.7 6.7 6.5 6.6 6.7 6.6 6.6 6.6 6.7 6.6 6.6 6.4 6.4 6.5 6.5 6.5 6.3 6.4 6.3 6.3 6.4 6.4 6.3 6.4 6.4 6.2 6.3 6.2 6.3 6.3 6.4
TCMAPQ >= 10 4.2 6.4 6.3 6.3 6.7 6.0 6.8 6.8 6.9 6.4 6.7 6.6 7.0 6.7 6.8 6.6 6.7 6.7 6.9 6.6 6.7 6.3 6.5 6.4 6.7 6.6 6.7 6.6 6.6 6.5 6.2 6.5 6.3 6.8 6.6 6.7 6.6 6.5 6.6 6.6 6.6 6.7 6.9 6.8 6.8 6.7 6.8 6.9 6.8 6.8 6.8 7.0 7.0 6.8 6.6 6.8 6.9 6.9 6.9 6.5 6.6 6.4 6.4 6.5 6.5 6.7 6.5 6.3 6.2 6.2 6.1 6.1 6.1 6.2
TCMAPQ >= 3 4.2 6.6 6.5 6.5 6.8 6.0 6.8 6.5 6.5 6.1 6.6 6.6 6.9 6.3 6.4 6.3 6.5 6.6 6.9 6.6 6.7 6.2 6.1 6.3 6.5 6.6 6.9 6.8 6.7 6.3 6.0 6.3 6.2 6.7 6.5 6.8 6.6 6.5 6.6 6.4 6.8 6.7 7.3 7.3 7.1 6.7 6.8 6.8 6.8 6.9 6.9 7.0 6.8 6.7 6.6 6.9 6.8 6.9 6.9 6.5 6.4 6.1 6.0 6.1 6.1 6.3 6.1 5.8 5.7 5.5 5.4 5.5 5.6 5.8
TCMAPQ < 3 4.4 6.4 6.4 6.3 6.6 6.2 6.8 6.8 6.8 6.5 6.6 6.6 6.8 6.6 6.5 6.5 6.6 6.6 6.6 6.6 6.6 6.5 6.5 6.5 6.7 6.6 6.6 6.5 6.7 6.5 6.4 6.5 6.5 6.7 6.6 6.6 6.5 6.6 6.6 6.5 6.6 6.6 6.7 6.7 6.7 6.6 6.7 6.7 6.6 6.7 6.7 6.8 6.7 6.7 6.6 6.6 6.7 6.7 6.7 6.5 6.5 6.5 6.4 6.5 6.5 6.5 6.4 6.4 6.3 6.4 6.3 6.3 6.4 6.5
TCUnmapped 4.5 6.4 11.4 6.4 6.5 6.1 6.5 6.8 6.7 6.3 6.2 6.2 6.4 6.3 6.0 10.4 6.0 6.2 6.1 6.0 5.7 5.8 6.1 6.0 5.9 5.7 5.7 6.0 6.0 5.7 5.6 5.8 6.0 6.1 5.9 5.8 5.9 6.2 6.1 6.0 10.5 5.9 6.2 11.0 6.1 10.7 6.0 6.2 6.2 6.0 5.8 5.9 6.1 6.1 5.9 10.3 5.7 6.1 10.8 5.8 5.7 5.8 6.0 6.0 5.8 5.6 5.8 6.1 6.0 5.9 5.8 6.0 6.4 6.4
TGMAPQ >= 30 5.8 7.5 7.4 7.8 7.6 7.6 7.2 7.8 7.8 7.6 7.5 7.6 7.6 7.7 7.6 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.8 7.7 7.8 7.8 7.7 7.8 7.7 7.7 7.7 7.8 7.7 7.8 7.8 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.7 7.6 7.7 7.7 7.7 7.7 7.6 7.6 7.6
TGMAPQ >= 20 6.1 7.8 7.7 8.2 8.0 7.8 7.4 8.1 8.1 7.7 7.7 7.7 8.0 8.0 7.7 7.8 7.9 7.8 7.8 7.9 7.8 7.9 7.9 7.8 7.8 7.8 8.0 7.9 8.0 8.1 7.9 7.9 7.9 7.9 7.9 7.9 7.8 7.9 8.0 7.9 7.8 7.8 7.8 7.8 7.7 7.7 7.7 7.8 7.6 7.6 7.7 7.6 7.7 7.8 7.7 7.8 7.6 7.8 7.7 7.6 7.3 7.6 7.5 7.5 7.5 7.5 7.4 7.4 7.6 7.5 7.5 7.4 7.4 7.4
TGMAPQ >= 10 6.1 7.9 7.9 8.1 8.1 7.9 7.5 8.4 8.3 7.6 7.6 7.7 8.2 8.1 7.6 8.1 8.1 7.9 7.9 8.0 7.7 8.1 8.0 7.9 7.9 7.7 8.0 7.8 7.8 8.1 8.0 8.0 7.9 7.9 8.0 8.0 8.0 8.1 8.2 8.1 7.9 7.9 8.1 8.1 7.9 7.9 7.8 7.9 7.7 7.5 7.8 7.7 7.7 8.0 7.8 7.8 7.6 7.8 7.6 7.6 7.4 7.7 7.6 7.7 7.6 7.7 7.5 7.5 7.8 7.8 7.7 7.4 7.5 7.5
TGMAPQ >= 3 6.0 7.7 7.5 7.8 7.9 7.8 7.3 7.9 7.9 7.1 7.0 7.2 7.6 7.7 7.3 7.5 7.4 7.3 7.4 7.6 7.3 7.6 7.6 7.6 7.6 7.5 7.7 7.7 7.7 7.9 7.7 7.7 7.5 7.6 7.7 7.8 7.8 8.1 8.3 8.0 8.1 7.9 8.0 8.1 7.9 7.8 7.6 7.6 7.4 7.1 7.4 7.3 7.7 7.8 7.5 7.5 7.2 7.2 7.2 7.3 7.3 7.7 7.6 7.8 7.7 7.9 7.7 7.9 8.2 7.9 7.9 7.6 7.5 7.6
TGMAPQ < 3 5.9 7.6 7.6 8.0 7.8 7.7 7.3 8.0 7.9 7.5 7.5 7.6 7.8 7.8 7.6 7.7 7.8 7.8 7.7 7.8 7.7 7.8 7.8 7.7 7.7 7.7 7.9 7.7 7.8 7.9 7.8 7.8 7.8 7.8 7.8 7.8 7.8 7.9 7.9 7.9 7.8 7.8 7.8 7.9 7.8 7.7 7.7 7.8 7.6 7.5 7.6 7.6 7.7 7.8 7.6 7.7 7.6 7.7 7.6 7.7 7.5 7.7 7.7 7.7 7.7 7.8 7.6 7.6 7.8 7.8 7.7 7.6 7.6 7.6
TGUnmapped 5.2 6.8 6.8 7.2 6.8 6.6 6.4 6.9 7.1 6.7 6.5 6.6 6.7 6.8 6.8 6.3 6.6 6.8 6.8 6.7 6.4 6.6 6.8 6.8 6.7 11.4 6.8 6.7 6.9 6.8 6.4 6.6 6.8 6.7 6.6 6.4 6.5 6.7 6.6 6.6 6.3 6.4 6.6 6.7 6.5 6.3 6.4 6.6 6.6 6.6 11.1 6.5 6.6 6.7 6.5 6.4 6.4 6.6 6.6 6.6 10.9 6.4 6.5 6.5 11.1 6.2 6.2 6.4 6.3 6.2 6.0 6.1 6.3 6.3
TTMAPQ >= 30 6.8 8.9 8.7 8.4 8.2 8.4 8.7 8.8 8.8 8.7 8.6 8.6 8.6 8.5 8.3 8.2 8.2 8.0 8.0 7.9 8.0 8.0 8.1 8.1 8.1 8.1 8.0 8.0 8.0 7.9 7.9 7.9 7.9 7.9 8.0 7.9 7.9 7.9 7.9 7.9 7.8 7.9 7.9 7.9 8.0 7.9 7.9 7.9 7.8 7.8 7.8 7.8 7.8 7.9 7.9 7.9 7.9 7.9 7.9 7.8 7.8 7.8 7.8 7.9 7.9 7.8 7.9 7.9 7.9 7.9 7.9 7.8 7.9 7.9
TTMAPQ >= 20 6.8 8.7 8.6 8.3 8.1 8.2 8.5 8.4 8.3 8.2 8.2 8.2 8.3 8.1 7.9 7.8 7.8 7.7 7.6 7.4 7.5 7.5 7.5 7.5 7.4 7.4 7.4 7.4 7.3 7.2 7.1 7.2 7.3 7.3 7.4 7.3 7.3 7.4 7.3 7.2 7.2 7.3 7.4 7.3 7.3 7.3 7.3 7.3 7.2 7.2 7.3 7.3 7.4 7.4 7.3 7.5 7.6 7.5 7.5 7.4 7.6 7.7 7.8 7.8 7.8 7.7 7.7 7.7 7.6 7.5 7.3 7.3 7.3 7.4
TTMAPQ >= 10 6.9 8.7 8.6 8.3 8.0 8.0 8.2 8.0 7.8 7.7 7.7 7.8 7.8 7.6 7.4 7.2 7.3 7.1 7.0 6.7 6.8 6.7 6.7 6.8 6.5 6.5 6.6 6.6 6.6 6.4 6.4 6.4 6.5 6.6 6.6 6.6 6.4 6.5 6.4 6.2 6.1 6.3 6.4 6.2 6.2 6.1 6.2 6.1 6.0 6.0 6.2 6.2 6.2 6.2 6.1 6.3 6.3 6.2 6.1 6.0 6.2 6.2 6.4 6.4 6.5 6.2 6.3 6.3 6.4 6.3 6.2 6.3 6.4 6.6
TTMAPQ >= 3 7.0 8.9 8.9 8.9 8.6 8.6 8.7 8.4 8.3 8.2 8.3 8.4 8.3 8.1 7.9 7.6 7.7 7.5 7.6 7.2 7.1 7.0 6.8 6.9 6.9 7.1 7.2 7.1 6.9 6.5 6.5 6.4 6.5 6.8 6.9 6.7 6.7 6.7 6.6 6.5 6.4 6.7 6.9 6.7 6.4 6.2 6.2 5.9 5.8 5.9 6.1 6.1 6.1 6.2 6.2 6.2 6.3 6.4 6.5 6.5 6.5 6.5 6.7 6.8 6.9 6.7 6.7 6.4 6.4 6.3 6.2 6.2 6.4 6.6
TTMAPQ < 3 6.9 8.9 8.8 8.4 8.2 8.3 8.7 8.7 8.6 8.5 8.4 8.4 8.4 8.2 8.0 7.9 8.0 7.8 7.8 7.6 7.7 7.7 7.7 7.7 7.6 7.7 7.6 7.6 7.6 7.4 7.4 7.4 7.5 7.6 7.6 7.5 7.5 7.5 7.5 7.4 7.4 7.4 7.5 7.4 7.4 7.4 7.4 7.3 7.3 7.3 7.4 7.4 7.3 7.4 7.3 7.4 7.5 7.5 7.4 7.3 7.4 7.5 7.5 7.5 7.5 7.4 7.4 7.4 7.5 7.4 7.4 7.5 7.5 7.5
TTUnmapped 6.8 9.4 9.4 9.2 9.2 9.6 10.4 10.9 10.8 10.9 11.1 11.7 11.8 11.9 16.2 11.9 12.6 12.5 12.5 12.5 12.8 13.1 13.1 12.9 12.5 12.4 12.4 12.2 11.9 11.5 11.5 11.7 11.6 11.5 11.3 11.3 11.5 11.4 11.3 11.1 11.1 11.5 11.4 11.3 11.1 11.1 11.3 11.1 10.6 10.3 10.2 10.4 10.2 9.8 9.5 9.6 9.8 14.3 9.3 9.0 9.0 9.2 9.1 13.5 8.5 8.5 8.7 8.6 8.4 8.2 8.3 8.7 8.6 8.4
Percentage of 2-mers at each position of the read for each alignment quality interval. Numbers shown in bold corresponds to p-values of <= 1e-100.

Error Distribution

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3

Nucleotide Composition MAPQ >= 30

A C G T N

Nucleotide Composition MAPQ >= 20

A C G T N

Nucleotide Composition MAPQ >= 10

A C G T N

Nucleotide Composition MAPQ >= 3

A C G T N

Nucleotide Composition MAPQ < 3

A C G T N

Nucleotide Composition Unmapped

A C G T N

Length Distribution MAPQ >= 30

Length Distribution MAPQ >= 20

Length Distribution MAPQ >= 10

Length Distribution MAPQ >= 3

Length Distribution MAPQ < 3

Length Distribution Unmapped

Top 5 over-represented 2-mers MAPQ >= 30

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
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CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

AA

TG

CA

CT

TT

AA

CA

TG

CT

TT

AA

CA

CT

TG

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

AA

TG

CA

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

CT

TT

AA

TG

CT

CA

TT

AA

TG

CA

CT

TT

AA

CA

TG

AG

TT

AA

CA

TG

AG

TT

AA

CA

TG

CT

TT

AA

CA

TG

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 20

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AG

AA

CA

CT

GG

TT

AA

AG

TG

GG

TT

AA

TG

AG

CA

TT

TG

CA

AA

AG

TT

TG

AA

AG

CA

TT

TG

AA

CA

AG

TT

AA

TG

CT

CA

TT

TG

CA

CT

AA

TT

TG

CA

AA

AG

TT

AA

CA

TG

CT

TT

AA

TG

CA

AG

TT

AA

TG

CA

CT

TT

TG

CA

AA

CT

TT

TG

CA

AA

CT

TT

CA

TG

CT

AA

TG

TT

CA

CT

AA

TG

TT

CA

CT

AG

TG

CA

TT

CT

AG

TG

CA

CT

TT

AG

TG

CA

CT

TT

AG

TG

CA

CT

TT

AG

TG

CA

CT

TT

AG

TG

CA

AG

CT

TT

CA

TG

TT

CT

AG

TG

CA

AG

CT

TT

TG

CA

CT

AG

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

TT

TG

CA

AG

CT

TT

TG

CA

AG

CT

GG

TG

CA

AG

GG

CT

TG

CA

AG

CT

TT

TG

CA

AG

CT

TT

TG

CA

CT

AG

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

TT

TG

CA

AG

CT

GG

TG

CA

CT

AG

TT

TG

CA

CT

AG

TT

TG

CA

AG

CT

GG

TG

CA

CT

GG

AG

TG

CA

CT

AG

GG

TG

CA

CT

TT

GG

TG

CA

CT

AG

TT

CA

TG

CT

AG

TT

CA

TG

CT

AG

AA

CT

TG

CA

AG

AA

TG

CA

CT

AG

AA

CA

TG

AG

CT

AA

CA

CT

AG

TG

AA

CA

TG

CT

AG

AA

CA

CT

TG

AA

AG

CA

TG

CT

AA

AG

CA

TG

AA

AG

CT

TG

AA

CA

AG

CT

TG

AA

CA

TT

CT

AA

TT

TG

CT

CA

TG

AA

CA

CT

TT

AA

TG

CA

TT

CT

AA

CA

TG

CT

TT

AA

CA

TT

CT

TG

AA

CA

TT

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

TG

CT

AA

TT

CA

CT

TG

AA

TT

CA

TG

CT

AA

TG

CA

TT

CT

AA

CA

TG

GG

TT

AA

CA

AG

TG

GG

AA

CA

AG

TG

GG

AA

CA

GG

AG

TG

AA

CA

CC

AG

TG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 10

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AG

GG

CA

CT

AA

TT

GG

TG

AG

AA

TT

TG

GG

CA

CT

TT

TG

CA

AG

CT

TG

TT

GG

AG

CA

TT

GG

TG

CA

CT

TT

TG

CT

GG

CA

TG

TT

CA

CT

AG

TG

TT

CA

GG

AG

CA

GG

TT

TG

AG

TT

CA

TG

AG

GG

TT

CT

TG

CA

AG

TG

TT

CT

CA

AG

TG

CA

TT

CT

AG

CT

CA

TG

TT

GG

TG

CT

CA

AG

GG

TG

CA

CT

AG

TT

TG

CT

CA

AG

CC

TG

CT

CA

GG

AG

TG

CA

GG

CT

AG

GG

TG

CT

CA

AG

TG

CA

CT

CC

GG

TG

AG

CA

CT

GG

CA

TG

GG

AG

CT

TG

AG

GG

CA

CT

GG

TG

CA

AG

CT

TG

CA

GG

CC

AG

CA

TG

GG

AG

CC

CA

GG

TG

AG

CC

TG

GG

CA

AG

CC

GG

CA

TG

CT

AG

CA

TG

GG

AG

CT

CA

TG

GG

CT

AG

GG

TG

CA

CC

CT

CA

TG

GG

CT

CC

TG

CA

GG

AG

CT

TG

GG

CA

CC

CT

TG

CA

GG

CT

CC

TG

CA

GG

CT

CC

TG

CA

GG

CT

AG

TG

GG

CA

CT

CC

CT

TG

GG

CA

CC

TG

CA

CT

GG

CC

TG

CT

CC

CA

AG

TG

CA

CC

GG

CT

TG

CC

CA

CT

AG

CT

TG

CA

GG

CC

TG

CA

CT

CC

GG

CA

CC

TG

CT

AG

CT

CA

CC

AG

TG

CT

TG

CA

CC

GG

CT

CA

TG

GG

CC

CA

CT

TG

CC

AG

TG

CA

CC

CT

AG

TG

CT

CA

AG

CC

CA

TG

CT

CC

AG

CT

CA

TG

CC

AG

CT

CA

TG

AG

CC

CA

CT

TG

CC

AG

CA

CT

CC

TG

AG

CT

CA

CC

AG

TG

CA

CT

TG

CC

AA

CC

CT

CA

TG

AA

CC

CA

CT

TG

AA

CC

CT

CA

TG

AA

CC

CA

CT

TG

AA

CC

CA

CT

AA

TG

CC

CA

CT

AA

AG

CC

TG

CA

CT

AG

CC

CA

TG

AA

GG

CA

CC

TG

AA

AG

CC

AG

CA

AA

TG

CC

CA

AA

AG

TG

CC

AA

CA

AG

TG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ >= 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GG

CA

AG

CT

AA

TT

GG

TG

AA

AG

TT

GG

TG

CA

CT

TT

TG

CA

CT

AG

TT

TG

CA

AG

GG

TT

TG

CA

GG

CT

TT

TG

CA

AA

CT

TT

CA

TG

CT

AG

TT

TG

CA

AG

AA

TT

CA

AG

GG

AA

TT

CA

AG

AA

CT

TT

CT

CA

TG

AG

TT

CT

CA

TG

AG

TT

TG

CA

CT

AG

TT

CA

CT

AG

TG

TT

TG

AG

GG

CT

TT

AG

TG

CC

GG

AG

GG

CT

TT

CC

GG

AG

CT

TT

CC

GG

CA

TG

AG

CC

GG

AG

CT

TG

CA

GG

CA

TG

AG

CC

AG

GG

TG

CA

CT

GG

AG

TG

CA

CT

GG

TG

AG

CT

CA

GG

TG

CT

AG

CA

GG

TG

CA

CT

CC

GG

CA

TG

AG

CC

GG

CA

TG

AG

CC

GG

CA

TG

AG

CC

GG

CA

TG

AG

CC

GG

CA

TG

AG

CC

GG

CA

AG

TG

CC

GG

TG

CA

CC

AG

CA

TG

CC

GG

CT

CA

TG

GG

CC

AG

CA

TG

GG

CC

CT

TG

CA

GG

CT

CC

TG

GG

CA

CC

CT

TG

GG

CA

CT

CC

TG

CC

GG

CT

CA

CT

CC

TG

GG

CA

TG

CC

CT

CA

TC

CC

TG

CT

TC

CA

CC

TG

CA

CT

GG

CC

TG

CA

CT

AG

CC

TG

CT

CA

GG

CC

TG

CA

CT

GG

CC

CA

AG

CT

TG

CC

CT

AG

CA

GG

CC

CT

CA

TG

GG

CC

CT

CA

TG

GG

CT

CC

TG

CA

AG

TG

CC

CA

CT

AG

CT

CC

GG

TG

AA

CC

CT

TG

AG

GG

CT

CC

AA

GG

CA

CT

CC

GG

AG

AA

CT

CC

GG

CA

TG

CT

CA

CC

AA

TG

CT

AA

CA

TG

GG

TG

AA

CT

CA

CC

AA

CT

TG

CC

CA

AA

TG

CT

CC

CA

AA

CT

TG

CC

AG

TG

AA

CT

CA

CC

AA

TG

CC

CT

CA

TG

AA

CC

CT

CA

TG

AA

CC

CA

CT

AA

TG

CA

CC

GG

AA

TG

AG

CA

CC

AA

CC

AG

TG

CA

CC

AA

CA

TG

AG

CC

AA

TG

CA

GG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers MAPQ < 3

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

AA

AG

CA

CT

AT

TT

AA

TG

AG

GG

TT

AA

TG

CA

AG

TT

TG

AA

CA

AG

TT

AA

TG

AG

CA

TT

AA

TG

CA

AG

TT

AA

TG

CA

CT

TT

TG

AA

CA

CT

TT

TG

CA

AA

AG

TT

AA

CA

TG

AG

TT

AA

CA

TG

AG

TT

AA

CA

TG

CT

TT

AA

TG

CA

CT

TT

TG

AA

CA

CT

TT

AA

CA

TG

CT

TT

AA

TG

CA

AG

TT

TG

CA

AA

AG

TT

TG

CA

AA

CT

TT

TG

CA

AA

CT

TG

CA

TT

AA

CT

TT

TG

CA

AA

CT

TG

CA

TT

AA

CT

TG

TT

CA

AA

AG

CA

TG

TT

AA

AG

TG

TT

CA

AA

AG

TG

TT

CA

AA

AG

TG

CA

TT

AA

AG

CA

TG

TT

AA

AG

TG

CA

TT

AA

AG

TG

CA

TT

AA

AG

CA

TG

TT

AA

AG

CA

TG

TT

AA

AG

TG

CA

TT

AA

CT

TG

CA

TT

AA

AG

CA

TG

TT

AA

CT

TG

CA

TT

AA

AG

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

TT

CT

AA

TG

CA

AA

TT

CT

CA

TG

AA

TT

CT

TG

CA

AA

TT

CT

TG

CA

AA

TT

CT

CA

TG

AA

TT

CT

CA

TG

AA

AG

CT

CA

AA

TG

CT

AG

CA

TG

AA

CT

TT

CA

AA

TG

CT

TT

CA

TG

AA

CT

TT

CA

TG

AA

TT

CT

AA

CA

TG

CT

TT

AA

CA

TG

TT

CT

AA

CA

TG

TT

CT

AA

CA

TG

TT

CT

AA

CA

TG

CT

TT

CA

AA

TG

CT

TT

AA

CA

TG

CT

TT

AA

CA

TG

TT

CT

AA

CA

TG

TT

CT

AA

TG

CA

TT

CT

AA

TG

CA

TT

CT

AA

TG

CA

TT

CT

AA

CA

TG

TT

CT

AA

CA

TG

TT

CT

AA

TG

CA

TT

CT

AA

TG

CA

TT

AG

AA

CA

TG

TT

AG

AA

CA

TG

TT

AG

AA

CA

TG

TT

AG

AA

CA

TG

TT

AG

 
Top 5 enriched 2-mers at each positon within reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 5 over-represented 2-mers Unmapped

Pos1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374
Seq

GA

AA

AT

CA

AG

AT

AA

TT

TG

GA

TC

TT

AA

AT

TG

TT

AA

AT

TG

CA

GG

TT

AA

AT

CA

GA

TT

AA

AT

CA

AA

TT

AT

CA

TC

TT

AG

AA

AT

TG

TT

GA

AA

TG

CA

TT

AG

AA

CA

AT

TT

AA

GC

AT

CA

TT

AA

AT

CA

CG

TT

GG

AA

AT

TG

TT

AA

GT

TG

AT

TT

AA

CA

TG

AT

TT

TC

AA

AT

CA

TT

CA

AA

AT

TG

TT

AG

AA

TG

AT

TT

AA

GC

TG

CA

TT

CA

AA

TG

AT

TT

AG

AA

CA

AT

TT

GG

AA

AT

TG

TT

GA

AA

TG

AT

AA

TT

TG

CA

AT

TT

AT

AA

TG

CA

TT

TG

AA

AT

CA

TT

AA

GC

TG

AT

TT

CC

AA

TG

AT

TT

AA

TG

CG

CA

TT

GA

AA

TG

CA

TT

AG

AA

GG

AT

TT

GA

AA

TG

AT

TT

AA

AC

GG

TG

TT

CC

AA

GG

TG

TT

AA

GG

CG

TG

TT

AA

GC

GG

CA

TT

CA

AA

GG

TG

TT

AG

AA

GG

TG

TT

GA

AA

GG

TG

TT

AT

AA

GG

TG

TT

TC

AA

GG

CA

TT

CA

AA

GG

TG

TT

AT

AA

GG

TG

TT

TC

AA

GG

TG

TT

CT

AA

GG

CA

TT

TC

AA

GG

CA

TT

AA

GG

CG

TG

TT

GT

AA

GG

TG

TT

TA

AA

GG

CC

AT

TT

AA

GG

CA

TG

TT

AA

GG

CA

TT

AA

GC

GG

TG

CC

TT

AA

GG

TG

TT

AA

GG

CG

CC

TT

GT

AA

GG

CC

TC

TT

AA

GG

CC

CT

TT

AA

GG

TG

TT

AA

GG

TG

CC

TC

TT

GG

AA

CC

CT

TT

GG

AA

CC

TG

GG

TT

AA

CA

TT

GG

GC

AA

CC

CT

TT

GG

AA

CC

TT

GG

AA

CC

TG

TG

GG

TT

AA

CC

GA

GG

TT

AA

CA

AA

GG

TT

GA

CA

AA

GG

TT

CC

TG

AA

GG

TT

CC

GA

AA

GG

TT

CC

CA

AA

GG

TT

GA

CA

AA

GG

TT

AT

GA

AA

GG

TT

CC

AT

AA

GG

TT

CC

GA

 
Top 5 enriched 2-mers at each positon withion reads are shown. Red, orange, green and blue corresponds to p-values 1e-100, 1e-20, 1e-10 and 1e-5 respectively.

Top 20 over-represented 10-mers

MAPQ >= 30 MAPQ >= 20 MAPQ >= 10 MAPQ >= 3 MAPQ < 3 Unmapped
SeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-valueSeqenceCountP-value
GCCTGTAATC 1273686 0.0e+00 TTTTTTTTTT 279332 0.0e+00 GGAGGCTGAG 117919 0.0e+00 CTCCTGACCT 28482 0.0e+00 GGAGGCTGAG 205604 0.0e+00 TTTTTTTTTT 4178138 0.0e+00
GGGATTACAG 1240330 0.0e+00 AAAAAAAAAA 253654 0.0e+00 GAGGCTGAGG 116556 0.0e+00 TCCTGACCTC 25273 0.0e+00 GAGGCTGAGG 204437 0.0e+00 AAAAAAAAAA 2036433 0.0e+00
CTGGAGTGCA 1117479 0.0e+00 GGAGGCTGAG 124540 0.0e+00 AGGCTGAGGC 109743 0.0e+00 GGAGGCTGAG 24266 0.0e+00 CTCCTGACCT 190964 0.0e+00 ATTCCATTCC 736719 0.0e+00
ATCCCAGCAC 1076603 0.0e+00 GAGGCTGAGG 123162 0.0e+00 CTCAGCCTCC 106302 0.0e+00 GAGGCTGAGG 24246 0.0e+00 AGGCTGAGGC 189713 0.0e+00 TTCCATTCCA 733329 0.0e+00
CAGCACTTTG 1071959 0.0e+00 TAATCCCAGC 113805 0.0e+00 CCTCAGCCTC 105358 0.0e+00 AGGCTGAGGC 23191 0.0e+00 CTCAGCCTCC 185948 0.0e+00 CCATTCCATT 720911 0.0e+00
TCCCAGCACT 1067943 0.0e+00 AGGCTGAGGC 112530 0.0e+00 GGCTGAGGCA 103159 0.0e+00 CTCAGCCTCC 22814 0.0e+00 CCTCAGCCTC 184979 0.0e+00 TCCATTCCAT 717446 0.0e+00
AGTGCAGTGG 971034 0.0e+00 TGTAATCCCA 110020 0.0e+00 GCTGAGGCAG 101367 0.0e+00 CCTCAGCCTC 22779 0.0e+00 GGCTGAGGCA 176694 0.0e+00 CATTCCATTC 703536 0.0e+00
GCCCAGGCTG 955251 0.0e+00 GTAATCCCAG 107739 0.0e+00 CTCCTGACCT 99658 0.0e+00 GGCTGAGGCA 21709 0.0e+00 GCTGAGGCAG 174242 0.0e+00 GGAATGGAAT 677790 0.0e+00
GGAGTGCAGT 909187 0.0e+00 CTGTAATCCC 106572 0.0e+00 CTGAGGCAGG 98623 0.0e+00 GCCTCAGCCT 21628 0.0e+00 GCCTCAGCCT 171944 0.0e+00 TGGAATGGAA 676270 0.0e+00
TGCTGGGATT 814370 0.0e+00 CCTGTAATCC 105423 0.0e+00 GCCTCAGCCT 98339 0.0e+00 GCTGAGGCAG 21529 0.0e+00 CTGAGGCAGG 170909 0.0e+00 AATGGAATGG 668434 0.0e+00
CCAGCCTGGG 807272 0.0e+00 CTCAGCCTCC 105264 0.0e+00 TCCCAGCTAC 96504 0.0e+00 CTGAGGCAGG 21422 0.0e+00 TCCTGACCTC 170010 0.0e+00 ATGGAATGGA 665950 0.0e+00
GTGCAGTGGC 786817 0.0e+00 CCTCAGCCTC 104170 0.0e+00 TAATCCCAGC 96326 0.0e+00 AGGTCAGGAG 20826 0.0e+00 TCCCAGCTAC 169953 0.0e+00 GAATGGAATG 648686 0.0e+00
GTGCTGGGAT 779627 0.0e+00 GGCTGAGGCA 101657 0.0e+00 CCCAGCTACT 96097 0.0e+00 TCCCAGCTAC 20382 0.0e+00 CCCAGCTACT 168373 0.0e+00 GGGGGGGGGG 410815 0.0e+00
CTGCAACCTC 753463 0.0e+00 TCCCAGCTAC 98852 0.0e+00 TGTAATCCCA 91977 0.0e+00 TTTTAGTAGA 20378 0.0e+00 TAATCCCAGC 165213 0.0e+00 GATCGGAAGA 308953 0.0e+00
TTGCCCAGGC 737535 0.0e+00 GCTGAGGCAG 98062 0.0e+00 GTAATCCCAG 91747 0.0e+00 TTTAGTAGAG 20300 0.0e+00 GGGAGGCTGA 158896 0.0e+00 ATCGGAAGAG 303772 0.0e+00
TGCCTGTAAT 699232 0.0e+00 CCCAGCTACT 97385 0.0e+00 TGAGGCAGGA 90977 0.0e+00 CCCAGCTACT 20281 0.0e+00 TGAGGCAGGA 158390 0.0e+00 TCGGAAGAGC 298223 0.0e+00
ACTCCAGCCT 670123 0.0e+00 GCCTCAGCCT 94103 0.0e+00 TGCCTCAGCC 90309 0.0e+00 TTTTTAGTAG 20006 0.0e+00 TGTAATCCCA 158194 0.0e+00 CGGAAGAGCG 294148 0.0e+00
TGCACTCCAG 635165 0.0e+00 CTGAGGCAGG 93772 0.0e+00 CTCACTGCAA 89975 0.0e+00 TGAGGCAGGA 19952 0.0e+00 TGCCTCAGCC 157932 0.0e+00 GGAAGAGCGG 291518 0.0e+00
TTTTTTGAGA 617738 0.0e+00 GCTCACTGCA 93690 0.0e+00 AGGCAGGAGA 89860 0.0e+00 TTAGTAGAGA 19948 0.0e+00 AGGCAGGAGA 157851 0.0e+00 CTTTTTTTTT 289564 0.0e+00
GCACTCCAGC 614666 0.0e+00 GGGAGGCTGA 92869 0.0e+00 GAGGCAGGAG 89850 0.0e+00 AGGCAGGAGA 19894 0.0e+00 CTGCCTCAGC 157444 0.0e+00 GAAGAGCGGT 286144 0.0e+00