ntSynt Report — Molossidae free tailed bats

Assembly statistics

Statistic	Value
Number of assemblies	11
Range of number of chromosomes	23 – 25
Genome size range (Gbp)	2.2 – 2.5

Source: Molossidae_free_tailed_bats_assemblies/Molossidae_free_tailed_bats_abyss_fac-summary.tsv

Synteny block statistics

Statistic	Value
Number of blocks	1,408
Average synteny coverage (%)	86.48
Synteny coverage of smallest genome (%)	89.04
N50 length of synteny blocks (bp)	5,774,902

Source: ntSynt.k24.w1000.synteny_blocks.stats.tsv

Reasons for synteny block discontinuities

Synteny block discontinuity reason	Count
ori_change	679
indel	554
id_change	100
inconsistent_order	64
merge	10

Source: ntSynt.k24.w1000.discontinuity_reasons.tsv

Mash divergence distributions

Pairwise mash distances across full-genome, syntenic, and non-syntenic regions. Wilcoxon signed-rank test p-value shown between syntenic and non-syntenic distributions. Interactive — hover over a point to see the genome pair. Source: mash/mash_divergence_boxplot.html

Synteny ribbon plot

Molossidae_free_tailed_bats_ribbon-plot_tree

ntSynt-viz ribbon plot showing synteny blocks across all assemblies. Nuclear genome tree included in ribbon plot. Interactive — hover to highlight, click to pin tooltips. Source: ntsynt-viz/Molossidae_free_tailed_bats_ribbon-plot_tree.html