ntSynt Report — Phyllostomidae leaf nosed bats

Assembly statistics

Statistic	Value
Number of assemblies	27
Range of number of chromosomes	10 – 21
Genome size range (Gbp)	1.8 – 2.3

Source: Phyllostomidae_leaf_nosed_bats_assemblies/Phyllostomidae_leaf_nosed_bats_abyss_fac-summary.tsv

Synteny block statistics

Statistic	Value
Number of blocks	1,122
Average synteny coverage (%)	79.89
Synteny coverage of smallest genome (%)	84.52
N50 length of synteny blocks (bp)	4,398,688

Source: ntSynt.k24.w1000.synteny_blocks.stats.tsv

Reasons for synteny block discontinuities

Synteny block discontinuity reason	Count
indel	572
ori_change	465
id_change	58
inconsistent_order	26

Source: ntSynt.k24.w1000.discontinuity_reasons.tsv

Mash divergence distributions

Pairwise mash distances across full-genome, syntenic, and non-syntenic regions. Wilcoxon signed-rank test p-value shown between syntenic and non-syntenic distributions. Interactive — hover over a point to see the genome pair. Source: mash/mash_divergence_boxplot.html

Synteny ribbon plot

Phyllostomidae_leaf_nosed_bats_ribbon-plot_tree

ntSynt-viz ribbon plot showing synteny blocks across all assemblies. Nuclear genome tree included in ribbon plot. Interactive — hover to highlight, click to pin tooltips. Source: ntsynt-viz/Phyllostomidae_leaf_nosed_bats_ribbon-plot_tree.html