ntSynt Report — Dasyuridae marsupials

Assembly statistics

Statistic	Value
Number of assemblies	11
Range of number of chromosomes	6 – 8
Genome size range (Gbp)	2.6 – 3.3

Source: Dasyuridae_marsupials_assemblies/Dasyuridae_marsupials_abyss_fac-summary.tsv

Synteny block statistics

Statistic	Value
Number of blocks	10,195
Average synteny coverage (%)	80.23
Synteny coverage of smallest genome (%)	88.11
N50 length of synteny blocks (bp)	836,188

Source: ntSynt.k24.w1000.synteny_blocks.stats.tsv

Reasons for synteny block discontinuities

Synteny block discontinuity reason	Count
ori_change	6,749
indel	2,235
inconsistent_order	857
id_change	322
merge	31

Source: ntSynt.k24.w1000.discontinuity_reasons.tsv

Mash divergence distributions

Pairwise mash distances across full-genome, syntenic, and non-syntenic regions. Wilcoxon signed-rank test p-value shown between syntenic and non-syntenic distributions. Interactive — hover over a point to see the genome pair. Source: mash/mash_divergence_boxplot.html

Synteny ribbon plot

Dasyuridae_marsupials_ribbon-plot_tree

ntSynt-viz ribbon plot showing synteny blocks across all assemblies. Nuclear genome tree included in ribbon plot. Interactive — hover to highlight, click to pin tooltips. Source: ntsynt-viz/Dasyuridae_marsupials_ribbon-plot_tree.html