# BUSCO version is: 3.0.2 # The lineage dataset is: embryophyta_odb9 (Creation date: 2016-02-13, number of species: 30, number of BUSCOs: 1440) # To reproduce this run: python /gsc/btl/linuxbrew/bin/run_BUSCO.py -i trimadap/abyss/k128-kc4/arcs/redcedar.lr.c2_e30000_l2_r0.05.arcs.a0.4_l5_z10000.links.fa -o redcedar.lr.c2_e30000_l2_r0.05.arcs.a0.4_l5_z10000.links -l data/embryophyta_odb9/ -m genome -c 16 -t /var/tmp/sjackman/redcedar.lr.c2_e30000_l2_r0.05.arcs.a0.4_l5_z10000.links.busco/ -sp arabidopsis # # Summarized benchmarking in BUSCO notation for file trimadap/abyss/k128-kc4/arcs/redcedar.lr.c2_e30000_l2_r0.05.arcs.a0.4_l5_z10000.links.fa # BUSCO was run in mode: genome C:54.0%[S:50.4%,D:3.6%],F:6.9%,M:39.1%,n:1440 778 Complete BUSCOs (C) 726 Complete and single-copy BUSCOs (S) 52 Complete and duplicated BUSCOs (D) 99 Fragmented BUSCOs (F) 563 Missing BUSCOs (M) 1440 Total BUSCO groups searched