Information for 5-TAGATGGCAG (Motif 4)

A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A
p-value:1e-138
log p-value:-3.189e+02
Information Content per bp:1.530
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.3 +/- 55.7bp
Average Position of motif in Background124.1 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAGATGGCAG-
CAAGATGGCGGC
 A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TAGATGGCAG-
CAAGATGGCGGC
 A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAGATGGCAG
AACAGATGGC--
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAGATGGCAG
-ARNTGACA-
 A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGATGGCAG
-GGTTGGCAT
 A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TAGATGGCAG---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAGATGGCAG--
-TAATGGCGGNC
 A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAGATGGCAG
--CTTGGCAA
 A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAGATGGCAG--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAGATGGCAG
AACAGATGGT--
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T