Information for 18-MTTTGAAA (Motif 30)

G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T T A G C T G C A C G T A C T G A C A G T
p-value:1e-26
log p-value:-5.995e+01
Information Content per bp:1.719
Number of Target Sequences with motif4036.0
Percentage of Target Sequences with motif29.89%
Number of Background Sequences with motif9332.7
Percentage of Background Sequences with motif25.82%
Average Position of motif in Targets97.9 +/- 56.3bp
Average Position of motif in Background100.6 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:MTTTGAAA---
-TTTGAAACCG
 G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:MTTTGAAA-
ATTTGAATT
 G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-MTTTGAAA-
CCTTTGATGT
 A C G T G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-MTTTGAAA-
CCTTTGATST
 A C G T G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---MTTTGAAA--
TTCATTTGCATAT
 A C G T A C G T A C G T G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:MTTTGAAA-
ATTTGCATA
 G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---MTTTGAAA-
CTCATTTGCATW
 A C G T A C G T A C G T G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MTTTGAAA--
ATTTGCATAA
 G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:MTTTGAAA--
ATTTGCATAT
 G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--MTTTGAAA----
AAATAAGAAAAAAC
 A C G T A C G T G T C A A G C T C G A T A C G T A T C G G T C A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C