Information for 4-AGTGCCGTTT (Motif 5)

C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T
Reverse Opposite:
T G C A T C G A T C G A T A G C A C T G A C T G T G A C G T C A A T G C G A C T
p-value:1e-172
log p-value:-3.966e+02
Information Content per bp:1.532
Number of Target Sequences with motif6529.0
Percentage of Target Sequences with motif31.65%
Number of Background Sequences with motif6704.8
Percentage of Background Sequences with motif23.12%
Average Position of motif in Targets97.9 +/- 55.7bp
Average Position of motif in Background100.0 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTGCCGTTT-
-BRRCVGTTDN
 C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T
A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTGCCGTTT
-TTGCGGTTT
 C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTGCCGTTT-----
-GTGCCGTGTGCAAA
 C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCCGTTT----
CCTTGCAATTTTTNN
 A C G T C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTGCCGTTT----
--TGACCTTTNCNT
 C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCCGTTT---
NNGTANTGTTTTNC
 A C G T C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTGCCGTTT---
---ANCGTTTANN
 C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTGCCGTTT
TTTGCGGTTT
 C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTGCCGTTT----
NNNGTGACCTTTGNNN
 A C G T A C G T C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTGCCGTTT
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A T A C G C A G T A C T G T G A C T G A C A T C G A G C T A G C T A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T