Information for 23-ACTATGTCCC (Motif 34)

C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T
p-value:1e-36
log p-value:-8.330e+01
Information Content per bp:1.530
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.9 +/- 44.8bp
Average Position of motif in Background98.3 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ACTATGTCCC-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTATGTCCC
YCTTTGTTCC
 C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

NR3C2/MA0727.1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACTATGTCCC-
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGTCCC--
GHTACAWTGTADCHR
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGTCCC--
GHWACAWTGTWDCWA
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACTATGTCCC-
GGGTACATAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACTATGTCCC---
---CTGTTCCTGG
 C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGTCCC--
TGGACTTTGNNCTCN
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGTCCC---
TGGACTTTGNNCTNTG
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ACTATGTCCC
RGMCCTACTRTGTGC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C A C G T