Information for 12-CGTTSTAA (Motif 25)

A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A
Reverse Opposite:
C G A T G C A T T G C A T A G C G C T A T C G A T G A C T A C G
p-value:1e-56
log p-value:-1.291e+02
Information Content per bp:1.434
Number of Target Sequences with motif3366.0
Percentage of Target Sequences with motif16.32%
Number of Background Sequences with motif3631.4
Percentage of Background Sequences with motif12.52%
Average Position of motif in Targets96.9 +/- 57.0bp
Average Position of motif in Background100.0 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CGTTSTAA-----
AGNGTTCTAATGANN
 A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CGTTSTAA-----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CGTTSTAA-----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CGTTSTAA-----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTTSTAA-----
NCCGTTGCTANGNGN
 A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0131.1_Gmeb1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGTTSTAA-
TGGGCGACGTCGTTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTTSTAA-----
NNCGTTGCTATGGNN
 A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CGTTSTAA--
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTTSTAA
CTTTGT--
 A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------CGTTSTAA-
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G C T C G A T A T C G A C G T C G T A G C T A A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T