Information for 12-GCTCGCACTC (Motif 24)

A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A G T C A C T G C G T A A C T G A G T C
p-value:1e-59
log p-value:-1.359e+02
Information Content per bp:1.987
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.6 +/- 54.7bp
Average Position of motif in Background120.4 +/- 51.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCTCGCACTC
GCTCGGSCTC
 A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCTCGCACTC--
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCTCGCACTC----
NNAGTCCCACTCNNNN
 A C G T A C G T A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTCGCACTC---
---NSCACTYVAV
 A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTCGCACTC--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTCGCACTC-
GSCTGTCACTCA
 A C G T A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCTCGCACTC--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTCGCACTC--
--AASCACTCAA
 A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTCGCACTC
TBGCACGCAA--
 A C G T A C G T A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTCGCACTC-
-CRCCCACGCA
 A C T G A G T C A C G T A G T C A C T G A G T C C G T A G T A C A C G T G T A C A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A