Information for 19-ATACTCATATAT (Motif 20)

C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T
Reverse Opposite:
C T G A A G C T G C T A A C G T T G C A A C G T A T C G C G T A C T A G A G C T G T C A C G A T
p-value:1e-78
log p-value:-1.803e+02
Information Content per bp:1.862
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.1 +/- 62.2bp
Average Position of motif in Background123.9 +/- 50.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATACTCATATAT
GAATATTCAT----
 A C G T A C G T C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATACTCATATAT-----
ANNNGGATATATCCNNN
 C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATACTCATATAT
GHATATKCAT----
 A C G T A C G T C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATACTCATATAT-----
-TGACCATATATGGTCA
 C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATACTCATATAT
ATATTTACATA-
 C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATACTCATATAT-
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATACTCATATAT-
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATACTCATATAT-----
-NANTTATATATAANGN
 C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATACTCATATAT
TGAGTCATTTC-
 C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATACTCATATAT
ATATTTACATA-
 C G T A A C G T C T G A A G T C A C G T A T G C C G T A A C G T G T C A C A G T C T G A A G C T
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T