Homer de novo Motif Results (/home/egibbard/epigenomics3/peak_called/blacklist_rm/50_percent_called_peak/homer/CHIP/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 31312
Total background sequences = 30974
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G T G A C A G T C G T A C G A T C A G T C G A C T C T G A A T C G G C A T A C T G C A T G 1e-26164-6.025e+0469.31%2.59%23.9bp (59.8bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.924)
More Information | Similar Motifs Found		motif file (matrix)
2 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A 1e-2419-5.572e+033.78%0.01%25.6bp (67.3bp)Hic1/MA0739.1/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
3 T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G 1e-682-1.570e+0321.16%10.35%49.3bp (60.7bp)POL009.1_DCE_S_II/Jaspar(0.688)
More Information | Similar Motifs Found		motif file (matrix)
4 A G C T A G T C A C G T A C G T A G T C A G C T A C T G T C A G A C G T A G T C G T C A A G T C 1e-658-1.517e+031.02%0.01%37.7bp (27.0bp)PB0153.1_Nr2f2_2/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
5 T C A G C T A G C A G T A T G C A G C T C G T A A C T G A G T C T C A G T A C G A C G T C T G A 1e-601-1.385e+031.07%0.01%58.0bp (32.6bp)SMAD3/MA0795.1/Jaspar(0.566)
More Information | Similar Motifs Found		motif file (matrix)
6 T C G A C T A G C T A G T G A C C T G A A C G T T C G A C T G A A G T C C G T A A T C G C T G A 1e-547-1.261e+030.87%0.01%18.8bp (15.4bp)PB0121.1_Foxj3_2/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C C T G A C T A G A G T C G A C T G T A C G T A C A C G T C G T A A C G T A G T C C G A T 1e-521-1.200e+030.84%0.00%63.1bp (0.0bp)PB0021.1_Gata3_1/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
8 T G A C C G T A C T A G T A C G T A G C G T A C G C T A A C G T C T G A T G A C G T C A T C A G 1e-506-1.167e+030.82%0.00%71.7bp (0.0bp)CDX2/MA0465.1/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
9 A C T G C T A G A C T G C G T A A C T G A G T C A G T C G T A C 1e-482-1.112e+0329.42%18.44%52.2bp (59.4bp)PB0052.1_Plagl1_1/Jaspar(0.769)
More Information | Similar Motifs Found		motif file (matrix)
10 C T G A G T A C C G T A A C T G A G T C C T A G T G A C G T A C 1e-424-9.769e+028.44%3.19%46.7bp (63.6bp)Rhox11/MA0629.1/Jaspar(0.779)
More Information | Similar Motifs Found		motif file (matrix)
11 G A C T A G T C A G T C G T A C C G T A A T C G C G T A G A T C A C T G A T G C A C G T A T C G 1e-419-9.659e+020.80%0.01%48.1bp (48.3bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.653)
More Information | Similar Motifs Found		motif file (matrix)
12 G A T C G A T C C G A T G T C A A C T G A T C G T C G A T C G A T C G A C T G A C T A G A G T C 1e-388-8.946e+020.66%0.01%77.6bp (47.2bp)NFATC2/MA0152.1/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
13 A C T G A G T C A C G T A G T C C G A T A G T C C G T A A G T C A C G T A G T C A C G T A C G T 1e-347-7.994e+020.69%0.01%29.1bp (62.6bp)PRDM1/MA0508.1/Jaspar(0.647)
More Information | Similar Motifs Found		motif file (matrix)
14 A C T G C T A G C G T A A T G C C G T A A C G T T C G A T C A G A G C T C T A G T C G A A C T G 1e-345-7.947e+020.69%0.01%50.8bp (35.1bp)PH0152.1_Pou6f1_2/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
15 A G T C T G C A C T G A G A T C C T A G A C T G T A C G G A T C C T A G A C G T A G T C G C A T 1e-261-6.027e+020.55%0.01%58.5bp (8.8bp)PB0143.1_Klf7_2/Jaspar(0.612)
More Information | Similar Motifs Found		motif file (matrix)
16 C T A G G T C A C G T A A G T C A C G T A C T G A G T C C T G A 1e-254-5.855e+0216.80%10.45%47.9bp (62.9bp)PB0091.1_Zbtb3_1/Jaspar(0.811)
More Information | Similar Motifs Found		motif file (matrix)
17 T C G A G A T C C T A G C T A G C A G T A T G C A G T C C T A G A G T C A G C T G C A T T A C G 1e-251-5.798e+020.46%0.00%69.6bp (0.0bp)HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer(0.759)
More Information | Similar Motifs Found		motif file (matrix)
18 G C A T A G C T A G C T C G A T G T A C G T A C A T C G A T G C 1e-202-4.664e+0263.27%54.79%58.8bp (59.8bp)PB0075.1_Sp100_1/Jaspar(0.721)
More Information | Similar Motifs Found		motif file (matrix)
19 A C G T T C G A C G A T C T A G C G T A A C G T C G A T C T A G G C A T C G T A A T C G C G T A 1e-156-3.614e+020.41%0.01%81.3bp (38.9bp)PH0022.1_Dlx3/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
20 C G T A T C G A T C G A G A T C C T A G A G C T G A C T C A G T A G T C G A T C 1e-142-3.276e+0250.05%42.90%58.6bp (59.0bp)NFATC1/MA0624.1/Jaspar(0.653)
More Information | Similar Motifs Found		motif file (matrix)
21 A C G T A C T G A C G T A G T C C G A T C G T A A G T C A C T G C T A G C T A G 1e-138-3.191e+020.34%0.01%60.9bp (27.5bp)PB0056.1_Rfxdc2_1/Jaspar(0.606)
More Information | Similar Motifs Found		motif file (matrix)
22 C T G A A C T G A C G T A C T G A G C T G A T C C G T A G C T A A C T G A T C G C G T A C G T A 1e-134-3.093e+020.28%0.01%81.1bp (17.3bp)Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer(0.623)
More Information | Similar Motifs Found		motif file (matrix)
23 A C T G A G T C A C T G A C G T G A C T A C G T A C G T A G T C G T A C A T G C 1e-132-3.058e+020.54%0.04%52.9bp (20.8bp)NFATC2/MA0152.1/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
24 A T G C T G C A C G T A A G T C A T G C G C T A C G T A T C G A C G T A C G T A A C G T A C T G 1e-89-2.059e+020.30%0.01%49.4bp (59.4bp)MF0008.1_MADS_class/Jaspar(0.676)
More Information | Similar Motifs Found		motif file (matrix)
25 G T A C A C G T T A C G A G T C G A C T T C G A G T C A C G T A G T A C G T C A A C G T A T G C 1e-89-2.055e+020.20%0.01%37.7bp (13.3bp)FOXD1/MA0031.1/Jaspar(0.646)
More Information | Similar Motifs Found		motif file (matrix)
26 G A C T T G C A G T A C G A C T A C G T C G T A A T C G A G T C C T A G A C T G T G C A G A T C 1e-79-1.842e+020.27%0.01%68.5bp (34.7bp)HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer(0.650)
More Information | Similar Motifs Found		motif file (matrix)
27 C G A T C A T G A C G T T G A C A T C G G A T C T A G C A C G T 1e-79-1.841e+023.02%1.53%55.9bp (59.9bp)PB0118.1_Esrra_2/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
28 A C G T A C T G A C T G A G T C A C T G A C G T A C G T C G T A 1e-71-1.646e+020.53%0.09%41.7bp (59.8bp)Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer(0.731)
More Information | Similar Motifs Found		motif file (matrix)
29 C G T A A C T G A C T G A G T C A C G T A G T C A C T G A G T C 1e-60-1.391e+020.86%0.26%38.6bp (53.7bp)PB0008.1_E2F2_1/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
30 A C T G A C G T G T A C A C T G A C T G C G T A A G C T C A T G A G C T A G C T 1e-54-1.251e+020.19%0.01%44.1bp (10.6bp)PB0181.1_Spdef_2/Jaspar(0.700)
More Information | Similar Motifs Found		motif file (matrix)