/projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77373/A77373.CBTEAANXX_2.bam Tue.Oct.31.16.47.04.PDT.2017-bioqc01
17877280 + 1454010 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
194415 + 16085 duplicates
17399233 + 1027340 mapped (97.33% : 70.66%)
17877280 + 1454010 paired in sequencing
8938640 + 727005 read1
8938640 + 727005 read2
17261959 + 998100 properly paired (96.56% : 68.64%)
17297680 + 1000021 with itself and mate mapped
101553 + 27319 singletons (0.57% : 1.88%)
13904 + 1111 with mate mapped to a different chr
2534 + 334 with mate mapped to a different chr (mapQ>=5)
4d2840da058bc284441debfece386a6d  /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77373/A77373.CBTEAANXX_2.bam Tue.Oct.31.16.47.28.PDT.2017-bioqc01