48842104 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 secondary 0 + 0 supplementary 0 + 0 duplicates 48842104 + 0 mapped (100.00% : N/A) 48842104 + 0 paired in sequencing 24464496 + 0 read1 24377608 + 0 read2 48346197 + 0 properly paired (98.98% : N/A) 48708446 + 0 with itself and mate mapped 133658 + 0 singletons (0.27% : N/A) 95559 + 0 with mate mapped to a different chr 95559 + 0 with mate mapped to a different chr (mapQ>=5)