/projects/bioqc_dev/ilitests/BQ-861/cPin/IX5763/A77337/A77337.CBKY8ANXX_5.bam Tue.Oct.24.00.51.05.PDT.2017-bioqc06.hpc.bcgsc.ca
21447394 + 2330142 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
400298 + 59338 duplicates
21167563 + 1632138 mapped (98.70% : 70.04%)
21447394 + 2330142 paired in sequencing
10723697 + 1165071 read1
10723697 + 1165071 read2
20835551 + 1582104 properly paired (97.15% : 67.90%)
21082787 + 1593248 with itself and mate mapped
84776 + 38890 singletons (0.40% : 1.67%)
11103 + 1350 with mate mapped to a different chr
2726 + 561 with mate mapped to a different chr (mapQ>=5)
b7b5d6f717192a5c75658613405415b8  /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5763/A77337/A77337.CBKY8ANXX_5.bam Tue.Oct.24.00.51.32.PDT.2017-bioqc06.hpc.bcgsc.ca