/projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77321/A77321.CBKY8ANXX_4.bam Wed.Oct.18.14.48.19.PDT.2017-bioqc01
39172086 + 2865746 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
1096796 + 65749 duplicates
37594424 + 2072056 mapped (95.97% : 72.30%)
39172086 + 2865746 paired in sequencing
19586043 + 1432873 read1
19586043 + 1432873 read2
37080453 + 2001902 properly paired (94.66% : 69.86%)
37307987 + 2011532 with itself and mate mapped
286437 + 60524 singletons (0.73% : 2.11%)
80026 + 4190 with mate mapped to a different chr
49217 + 2241 with mate mapped to a different chr (mapQ>=5)
2900aeab0c0f6eed5ad6eb550f957978  /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77321/A77321.CBKY8ANXX_4.bam Wed.Oct.18.14.49.45.PDT.2017-bioqc01