/projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77313/A77313.CBKY8ANXX_4.bam Mon.Oct.23.22.38.51.PDT.2017-bioqc01
14561554 + 1060594 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
257005 + 16179 duplicates
13845759 + 744354 mapped (95.08% : 70.18%)
14561554 + 1060594 paired in sequencing
7280777 + 530297 read1
7280777 + 530297 read2
13626879 + 718180 properly paired (93.58% : 67.71%)
13713059 + 721078 with itself and mate mapped
132700 + 23276 singletons (0.91% : 2.19%)
17079 + 924 with mate mapped to a different chr
2595 + 256 with mate mapped to a different chr (mapQ>=5)
00421368d8bcd7508186c886fc805a41  /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77313/A77313.CBKY8ANXX_4.bam Mon.Oct.23.22.39.24.PDT.2017-bioqc01