/projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77304/A77304.CBKY8ANXX_4.bam Mon.Oct.23.19.40.30.PDT.2017-bioqc01
35908248 + 2727374 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
762897 + 58841 duplicates
34391760 + 1892272 mapped (95.78% : 69.38%)
35908248 + 2727374 paired in sequencing
17954124 + 1363687 read1
17954124 + 1363687 read2
33798738 + 1817384 properly paired (94.13% : 66.63%)
34106204 + 1828040 with itself and mate mapped
285556 + 64232 singletons (0.80% : 2.36%)
34538 + 2164 with mate mapped to a different chr
5215 + 671 with mate mapped to a different chr (mapQ>=5)
dd68575e6d1c082a66c68f7e64792452  /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77304/A77304.CBKY8ANXX_4.bam Mon.Oct.23.19.41.51.PDT.2017-bioqc01