/projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77302/A77302.CBKY8ANXX_4.bam Mon.Oct.23.18.31.38.PDT.2017-bioqc01
18845672 + 1449422 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
234762 + 22733 duplicates
18327790 + 1031945 mapped (97.25% : 71.20%)
18845672 + 1449422 paired in sequencing
9422836 + 724711 read1
9422836 + 724711 read2
18058002 + 994716 properly paired (95.82% : 68.63%)
18216422 + 1000238 with itself and mate mapped
111368 + 31707 singletons (0.59% : 2.19%)
11958 + 958 with mate mapped to a different chr
2257 + 347 with mate mapped to a different chr (mapQ>=5)
44cd7983dce671ab59acf42f22bc9f86  /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5762/A77302/A77302.CBKY8ANXX_4.bam Mon.Oct.23.18.32.21.PDT.2017-bioqc01